RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 FAM208AQ9UK61 1670 aaKnown RBP25.8■■□□□ 1.72
UFD1-202ENST00000399523 DOT1LQ8TEK3 1739 aa25.8■■□□□ 1.72
UFD1-202ENST00000399523 CCNL1Q9UK58 526 aaPredicted RBP25.8■■□□□ 1.72
UFD1-202ENST00000399523 HSPA6P17066 643 aa25.79■■□□□ 1.72
UFD1-202ENST00000399523 GPBP1L1Q9HC44 474 aaPredicted RBP25.79■■□□□ 1.72
UFD1-202ENST00000399523 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
UFD1-202ENST00000399523 CD2APQ9Y5K6 639 aa25.78■■□□□ 1.72
UFD1-202ENST00000399523 ADCY9O60503 1353 aa25.78■■□□□ 1.72
UFD1-202ENST00000399523 MSH5O43196 834 aa25.77■■□□□ 1.72
UFD1-202ENST00000399523 HDGFL2Q7Z4V5 671 aaPredicted RBP25.77■■□□□ 1.72
UFD1-202ENST00000399523 ZCRB1Q8TBF4 217 aaKnown RBP25.76■■□□□ 1.71
UFD1-202ENST00000399523 LTV1Q96GA3 475 aaPredicted RBP25.75■■□□□ 1.71
UFD1-202ENST00000399523 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
UFD1-202ENST00000399523 MSL1Q68DK7 614 aa25.74■■□□□ 1.71
UFD1-202ENST00000399523 TMC1Q8TDI8 760 aa25.74■■□□□ 1.71
UFD1-202ENST00000399523 USP47Q96K76 1375 aa25.72■■□□□ 1.71
UFD1-202ENST00000399523 TERF2IPQ9NYB0 399 aa25.71■■□□□ 1.71
UFD1-202ENST00000399523 A0A1W2PP64 1363 aa25.69■■□□□ 1.7
UFD1-202ENST00000399523 MEGF6O75095 1541 aa25.69■■□□□ 1.7
UFD1-202ENST00000399523 FLAD1Q8NFF5 587 aa25.69■■□□□ 1.7
UFD1-202ENST00000399523 HMGB2P26583 209 aaKnown RBP25.68■■□□□ 1.7
UFD1-202ENST00000399523 HOXC9P31274 260 aa25.68■■□□□ 1.7
UFD1-202ENST00000399523 ZNF526Q8TF50 670 aaPredicted RBP25.68■■□□□ 1.7
UFD1-202ENST00000399523 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
UFD1-202ENST00000399523 MAP3K19Q56UN5 1328 aa25.67■■□□□ 1.7
UFD1-202ENST00000399523 C5P01031 1676 aa25.67■■□□□ 1.7
UFD1-202ENST00000399523 SIN3AQ96ST3 1273 aa25.66■■□□□ 1.7
UFD1-202ENST00000399523 PUS7Q96PZ0 661 aaKnown RBP25.65■■□□□ 1.7
UFD1-202ENST00000399523 CGNL1Q0VF96 1302 aa25.64■■□□□ 1.7
UFD1-202ENST00000399523 TAF1LQ8IZX4 1826 aa25.64■■□□□ 1.7
UFD1-202ENST00000399523 AMPHP49418 695 aa25.63■■□□□ 1.69
UFD1-202ENST00000399523 KIF3CO14782 793 aa25.61■■□□□ 1.69
UFD1-202ENST00000399523 NBPF6Q5VWK0 638 aa25.61■■□□□ 1.69
UFD1-202ENST00000399523 COG3Q96JB2 828 aa25.61■■□□□ 1.69
UFD1-202ENST00000399523 NBPF4Q96M43 638 aa25.61■■□□□ 1.69
UFD1-202ENST00000399523 FBLN1P23142 703 aa25.6■■□□□ 1.69
UFD1-202ENST00000399523 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
UFD1-202ENST00000399523 PALLDQ8WX93 1383 aa25.59■■□□□ 1.69
UFD1-202ENST00000399523 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
UFD1-202ENST00000399523 RTL1A6NKG5 1358 aa25.57■■□□□ 1.68
UFD1-202ENST00000399523 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
UFD1-202ENST00000399523 AMIGO3Q86WK7 504 aa25.57■■□□□ 1.68
UFD1-202ENST00000399523 RAPGEF4Q8WZA2 1011 aa25.56■■□□□ 1.68
UFD1-202ENST00000399523 C4BP0C0L5 1744 aa25.56■■□□□ 1.68
UFD1-202ENST00000399523 APLP1P51693 650 aa25.55■■□□□ 1.68
UFD1-202ENST00000399523 TOGARAM1Q9Y4F4 1720 aa25.54■■□□□ 1.68
UFD1-202ENST00000399523 UBR3Q6ZT12 1888 aa25.54■■□□□ 1.68
UFD1-202ENST00000399523 USHBP1Q8N6Y0 703 aa25.54■■□□□ 1.68
UFD1-202ENST00000399523 AK7Q96M32 723 aa25.54■■□□□ 1.68
UFD1-202ENST00000399523 MPRIPQ6WCQ1 1025 aa25.53■■□□□ 1.68
UFD1-202ENST00000399523 DNAJC5GQ8N7S2 189 aa25.53■■□□□ 1.68
UFD1-202ENST00000399523 WWC3Q9ULE0 1092 aa25.53■■□□□ 1.68
UFD1-202ENST00000399523 PCDH11XQ9BZA7 1347 aa25.53■■□□□ 1.68
UFD1-202ENST00000399523 PCDH11YQ9BZA8 1340 aa25.53■■□□□ 1.68
UFD1-202ENST00000399523 TATP17735 454 aaPredicted RBP25.52■■□□□ 1.68
UFD1-202ENST00000399523 SMARCC1Q92922 1105 aaPredicted RBP25.52■■□□□ 1.68
UFD1-202ENST00000399523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.51■■□□□ 1.67
UFD1-202ENST00000399523 NSD3Q9BZ95 1437 aa25.51■■□□□ 1.67
UFD1-202ENST00000399523 CICQ96RK0 1608 aaPredicted RBP25.51■■□□□ 1.67
UFD1-202ENST00000399523 RRS1Q15050 365 aaKnown RBP25.5■■□□□ 1.67
UFD1-202ENST00000399523 ITGB4P16144 1822 aa25.49■■□□□ 1.67
UFD1-202ENST00000399523 PHF14O94880 888 aa25.49■■□□□ 1.67
UFD1-202ENST00000399523 SMG6Q86US8 1419 aaKnown RBP25.48■■□□□ 1.67
UFD1-202ENST00000399523 CYP27B1O15528 508 aa25.48■■□□□ 1.67
UFD1-202ENST00000399523 TOMM70O94826 608 aa25.48■■□□□ 1.67
UFD1-202ENST00000399523 SSFA2P28290 1259 aa25.48■■□□□ 1.67
UFD1-202ENST00000399523 SMIM5Q71RC9 77 aa25.48■■□□□ 1.67
UFD1-202ENST00000399523 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.66
UFD1-202ENST00000399523 PIGBQ92521 554 aa25.45■■□□□ 1.66
UFD1-202ENST00000399523 TESK2Q96S53 571 aa25.45■■□□□ 1.66
UFD1-202ENST00000399523 INSRP06213 1382 aa25.44■■□□□ 1.66
UFD1-202ENST00000399523 FYB1O15117 783 aa25.43■■□□□ 1.66
UFD1-202ENST00000399523 HSP90AB2PQ58FF8 381 aa25.43■■□□□ 1.66
UFD1-202ENST00000399523 NKX1-1Q15270 411 aaPredicted RBP25.42■■□□□ 1.66
UFD1-202ENST00000399523 LINC00116Q8NCU8 138 aa25.42■■□□□ 1.66
UFD1-202ENST00000399523 KIF13BQ9NQT8 1826 aa25.42■■□□□ 1.66
UFD1-202ENST00000399523 LOC102724428A0A0B4J2F2 783 aa25.41■■□□□ 1.66
UFD1-202ENST00000399523 SIK1P57059 783 aa25.41■■□□□ 1.66
UFD1-202ENST00000399523 PXDNLA1KZ92 1463 aa25.4■■□□□ 1.66
UFD1-202ENST00000399523 GGNBP2Q9H3C7 697 aa25.4■■□□□ 1.66
UFD1-202ENST00000399523 TGFB2P61812 414 aa25.39■■□□□ 1.66
UFD1-202ENST00000399523 PKD1L3Q7Z443 1732 aa25.39■■□□□ 1.65
UFD1-202ENST00000399523 KIAA1551Q9HCM1 1747 aa25.39■■□□□ 1.65
UFD1-202ENST00000399523 KIF24Q5T7B8 1368 aa25.39■■□□□ 1.65
UFD1-202ENST00000399523 SLC24A1O60721 1099 aa25.38■■□□□ 1.65
UFD1-202ENST00000399523 MMP10P09238 476 aa25.38■■□□□ 1.65
UFD1-202ENST00000399523 FLT4P35916 1363 aa25.38■■□□□ 1.65
UFD1-202ENST00000399523 GNPATO15228 680 aa25.37■■□□□ 1.65
UFD1-202ENST00000399523 ITPK1Q13572 414 aa25.36■■□□□ 1.65
UFD1-202ENST00000399523 NMRK2Q9NPI5 230 aa25.36■■□□□ 1.65
UFD1-202ENST00000399523 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
UFD1-202ENST00000399523 ST20-MTHFSA0A0A6YYL1 179 aa25.35■■□□□ 1.65
UFD1-202ENST00000399523 RBM46Q8TBY0 533 aaKnown RBP25.35■■□□□ 1.65
UFD1-202ENST00000399523 BCS1LQ9Y276 419 aa25.35■■□□□ 1.65
UFD1-202ENST00000399523 WDR90Q96KV7 1748 aa25.34■■□□□ 1.65
UFD1-202ENST00000399523 NCAPD2Q15021 1401 aa25.34■■□□□ 1.65
UFD1-202ENST00000399523 A0A0G2JLW4 131 aa25.33■■□□□ 1.65
UFD1-202ENST00000399523 ARHGAP27Q6ZUM4 889 aa25.33■■□□□ 1.65
UFD1-202ENST00000399523 ASAP1Q9ULH1 1129 aa25.33■■□□□ 1.65
UFD1-202ENST00000399523 PCNTO95613 3336 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms