RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
TNRC18-202ENST00000399434 DISP2A7MBM2 1401 aa21.34■■□□□ 1.01
TNRC18-202ENST00000399434 NEFMP07197 916 aa21.33■■□□□ 1.01
TNRC18-202ENST00000399434 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
TNRC18-202ENST00000399434 EVA1CP58658 441 aa21.32■■□□□ 1
TNRC18-202ENST00000399434 C8orf37Q96NL8 207 aa21.32■■□□□ 1
TNRC18-202ENST00000399434 SPINK5Q9NQ38 1064 aaPredicted RBP21.32■■□□□ 1
TNRC18-202ENST00000399434 PDE3BQ13370 1112 aa21.3■■□□□ 1
TNRC18-202ENST00000399434 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
TNRC18-202ENST00000399434 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
TNRC18-202ENST00000399434 SCN11AQ9UI33 1791 aa21.3■■□□□ 1
TNRC18-202ENST00000399434 MAP3K5Q99683 1374 aa21.3■■□□□ 1
TNRC18-202ENST00000399434 FNBP4Q8N3X1 1017 aaPredicted RBP21.29■■□□□ 1
TNRC18-202ENST00000399434 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
TNRC18-202ENST00000399434 GOLGA2Q08379 1002 aa21.28■■□□□ 1
TNRC18-202ENST00000399434 RAPGEF4Q8WZA2 1011 aa21.28■■□□□ 1
TNRC18-202ENST00000399434 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
TNRC18-202ENST00000399434 SLFN5Q08AF3 891 aa21.27■■□□□ 1
TNRC18-202ENST00000399434 DCTN1Q14203 1278 aa21.27■■□□□ 1
TNRC18-202ENST00000399434 WDR63Q8IWG1 891 aa21.27■■□□□ 1
TNRC18-202ENST00000399434 SPATA31A1Q5TZJ5 1347 aa21.27■■□□□ 1
TNRC18-202ENST00000399434 PLEKHO1Q53GL0 409 aaPredicted RBP21.26■□□□□ 0.99
TNRC18-202ENST00000399434 UNC5CLQ8IV45 518 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
TNRC18-202ENST00000399434 NGLY1Q96IV0 654 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 SPATA31A5Q5VU36 1347 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 SPATA31A7Q8IWB4 1347 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 GLI3P10071 1580 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
TNRC18-202ENST00000399434 ZNF530Q6P9A1 599 aaPredicted RBP21.26■□□□□ 0.99
TNRC18-202ENST00000399434 TOGARAM1Q9Y4F4 1720 aa21.25■□□□□ 0.99
TNRC18-202ENST00000399434 LMOD3Q0VAK6 560 aa21.25■□□□□ 0.99
TNRC18-202ENST00000399434 USP35Q9P2H5 1018 aa21.25■□□□□ 0.99
TNRC18-202ENST00000399434 IL2RBP14784 551 aa21.24■□□□□ 0.99
TNRC18-202ENST00000399434 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
TNRC18-202ENST00000399434 MCM10Q7L590 875 aa21.24■□□□□ 0.99
TNRC18-202ENST00000399434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
TNRC18-202ENST00000399434 IL16Q14005 1332 aa21.24■□□□□ 0.99
TNRC18-202ENST00000399434 THSD7AQ9UPZ6 1657 aa21.23■□□□□ 0.99
TNRC18-202ENST00000399434 KDM6AO15550 1401 aaPredicted RBP21.23■□□□□ 0.99
TNRC18-202ENST00000399434 MEX3CQ5U5Q3 659 aaKnown RBP21.23■□□□□ 0.99
TNRC18-202ENST00000399434 AFF2P51816 1311 aa21.23■□□□□ 0.99
TNRC18-202ENST00000399434 CEMIPQ8WUJ3 1361 aa21.22■□□□□ 0.99
TNRC18-202ENST00000399434 KDM3BQ7LBC6 1761 aa21.22■□□□□ 0.99
TNRC18-202ENST00000399434 GNAT3A8MTJ3 354 aa21.22■□□□□ 0.99
TNRC18-202ENST00000399434 E9PSI1 815 aa21.22■□□□□ 0.99
TNRC18-202ENST00000399434 ATRNO75882 1429 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 CYP27B1O15528 508 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
TNRC18-202ENST00000399434 VPS72Q15906 364 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 IL17REQ8NFR9 667 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 TNS2Q63HR2 1409 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 MRC1P22897 1456 aa21.21■□□□□ 0.99
TNRC18-202ENST00000399434 USP21Q9UK80 565 aa21.2■□□□□ 0.98
TNRC18-202ENST00000399434 ZNF853P0CG23 659 aa21.2■□□□□ 0.98
TNRC18-202ENST00000399434 PHKG2P15735 406 aa21.2■□□□□ 0.98
TNRC18-202ENST00000399434 SPG7Q9UQ90 795 aa21.2■□□□□ 0.98
TNRC18-202ENST00000399434 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
TNRC18-202ENST00000399434 ZCRB1Q8TBF4 217 aaKnown RBP21.18■□□□□ 0.98
TNRC18-202ENST00000399434 TSR2Q969E8 191 aaKnown RBP21.18■□□□□ 0.98
TNRC18-202ENST00000399434 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
TNRC18-202ENST00000399434 THRAP3Q9Y2W1 955 aaKnown RBP21.18■□□□□ 0.98
TNRC18-202ENST00000399434 MPRIPQ6WCQ1 1025 aa21.17■□□□□ 0.98
TNRC18-202ENST00000399434 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
TNRC18-202ENST00000399434 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
TNRC18-202ENST00000399434 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
TNRC18-202ENST00000399434 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
TNRC18-202ENST00000399434 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
TNRC18-202ENST00000399434 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
TNRC18-202ENST00000399434 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
TNRC18-202ENST00000399434 CALD1Q05682 793 aaKnown RBP21.15■□□□□ 0.98
TNRC18-202ENST00000399434 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
TNRC18-202ENST00000399434 CCDC9Q9Y3X0 531 aaKnown RBP21.15■□□□□ 0.98
TNRC18-202ENST00000399434 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
TNRC18-202ENST00000399434 PAPPAQ13219 1627 aa21.14■□□□□ 0.97
TNRC18-202ENST00000399434 CFAP44Q96MT7 982 aa21.13■□□□□ 0.97
TNRC18-202ENST00000399434 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
TNRC18-202ENST00000399434 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
TNRC18-202ENST00000399434 ITGB4P16144 1822 aa21.13■□□□□ 0.97
TNRC18-202ENST00000399434 CHL1O00533 1208 aa21.12■□□□□ 0.97
TNRC18-202ENST00000399434 GNAI1P63096 354 aa21.12■□□□□ 0.97
TNRC18-202ENST00000399434 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
TNRC18-202ENST00000399434 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
TNRC18-202ENST00000399434 NKX1-1Q15270 411 aaPredicted RBP21.11■□□□□ 0.97
TNRC18-202ENST00000399434 FAM98CQ17RN3 349 aaKnown RBP21.1■□□□□ 0.97
TNRC18-202ENST00000399434 DDX54Q8TDD1 881 aaKnown RBP21.09■□□□□ 0.97
TNRC18-202ENST00000399434 DCAF5Q96JK2 942 aa21.09■□□□□ 0.97
TNRC18-202ENST00000399434 MIS18AQ9NYP9 233 aa21.09■□□□□ 0.97
TNRC18-202ENST00000399434 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.97
TNRC18-202ENST00000399434 GJD4Q96KN9 370 aaPredicted RBP21.08■□□□□ 0.97
TNRC18-202ENST00000399434 TRPC5Q9UL62 973 aaPredicted RBP21.08■□□□□ 0.97
TNRC18-202ENST00000399434 UBR2Q8IWV8 1755 aa21.08■□□□□ 0.97
TNRC18-202ENST00000399434 BRWD3Q6RI45 1802 aa21.08■□□□□ 0.96
TNRC18-202ENST00000399434 HSP90AB1P08238 724 aaKnown RBP21.07■□□□□ 0.96
TNRC18-202ENST00000399434 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
TNRC18-202ENST00000399434 DDB1Q16531 1140 aa21.06■□□□□ 0.96
TNRC18-202ENST00000399434 C5P01031 1676 aa21.06■□□□□ 0.96
TNRC18-202ENST00000399434 EXOC5O00471 708 aa21.05■□□□□ 0.96
TNRC18-202ENST00000399434 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms