RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
LINC00243-201ENST00000399196 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 IP6K1Q92551 441 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
LINC00243-201ENST00000399196 EYA1Q99502 592 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 ABCA3Q99758 1704 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
LINC00243-201ENST00000399196 PDE3AQ14432 1141 aa12.16□□□□□ -0.46
LINC00243-201ENST00000399196 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
LINC00243-201ENST00000399196 LTN1O94822 1766 aa12.16□□□□□ -0.46
LINC00243-201ENST00000399196 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
LINC00243-201ENST00000399196 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
LINC00243-201ENST00000399196 LAS1LQ9Y4W2 734 aaKnown RBP12.15□□□□□ -0.46
LINC00243-201ENST00000399196 ZNF853P0CG23 659 aa12.15□□□□□ -0.46
LINC00243-201ENST00000399196 ARHGEF25Q86VW2 580 aa12.15□□□□□ -0.46
LINC00243-201ENST00000399196 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
LINC00243-201ENST00000399196 KDRP35968 1356 aa12.14□□□□□ -0.47
LINC00243-201ENST00000399196 TSPYL6Q8N831 410 aa12.14□□□□□ -0.47
LINC00243-201ENST00000399196 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
LINC00243-201ENST00000399196 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
LINC00243-201ENST00000399196 COL22A1Q8NFW1 1626 aaPredicted RBP12.13□□□□□ -0.47
LINC00243-201ENST00000399196 CT47B1P0C2W7 299 aaPredicted RBP12.13□□□□□ -0.47
LINC00243-201ENST00000399196 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
LINC00243-201ENST00000399196 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
LINC00243-201ENST00000399196 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
LINC00243-201ENST00000399196 GNAI1P63096 354 aa12.12□□□□□ -0.47
LINC00243-201ENST00000399196 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
LINC00243-201ENST00000399196 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
LINC00243-201ENST00000399196 IGHDP01880 384 aa12.11□□□□□ -0.47
LINC00243-201ENST00000399196 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
LINC00243-201ENST00000399196 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
LINC00243-201ENST00000399196 SMC4Q9NTJ3 1288 aa12.11□□□□□ -0.47
LINC00243-201ENST00000399196 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
LINC00243-201ENST00000399196 TRIM27P14373 513 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 MCM10Q7L590 875 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 RGPD2P0DJD1 1756 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 VAMP4O75379 141 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 HSPA1LP34931 641 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
LINC00243-201ENST00000399196 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
LINC00243-201ENST00000399196 COL18A1P39060 1754 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
LINC00243-201ENST00000399196 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 NOB1Q9ULX3 412 aaKnown RBP12.09□□□□□ -0.47
LINC00243-201ENST00000399196 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
LINC00243-201ENST00000399196 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
LINC00243-201ENST00000399196 KIAA0232Q92628 1395 aa12.08□□□□□ -0.47
LINC00243-201ENST00000399196 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
LINC00243-201ENST00000399196 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
LINC00243-201ENST00000399196 TCERG1O14776 1098 aaKnown RBP12.07□□□□□ -0.48
LINC00243-201ENST00000399196 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
LINC00243-201ENST00000399196 CRB1P82279 1406 aa12.07□□□□□ -0.48
LINC00243-201ENST00000399196 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
LINC00243-201ENST00000399196 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
LINC00243-201ENST00000399196 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
LINC00243-201ENST00000399196 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 CPDO75976 1380 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 ERBB3P21860 1342 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 CHL1O00533 1208 aa12.06□□□□□ -0.48
LINC00243-201ENST00000399196 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
LINC00243-201ENST00000399196 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
LINC00243-201ENST00000399196 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
LINC00243-201ENST00000399196 TWISTNBQ3B726 338 aaPredicted RBP12.05□□□□□ -0.48
LINC00243-201ENST00000399196 NLRP2Q9NX02 1062 aa12.05□□□□□ -0.48
LINC00243-201ENST00000399196 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
LINC00243-201ENST00000399196 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 JCADQ9P266 1359 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 ZNF428Q96B54 188 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 LRP6O75581 1613 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 CAMTA1Q9Y6Y1 1673 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 PLEKHO1Q53GL0 409 aaPredicted RBP12.04□□□□□ -0.48
LINC00243-201ENST00000399196 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
LINC00243-201ENST00000399196 LRRC37A3O60309 1634 aa12.03□□□□□ -0.48
LINC00243-201ENST00000399196 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
LINC00243-201ENST00000399196 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
LINC00243-201ENST00000399196 MSH5O43196 834 aa12.03□□□□□ -0.48
LINC00243-201ENST00000399196 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
LINC00243-201ENST00000399196 FTSJ3Q8IY81 847 aaKnown RBP12.03□□□□□ -0.48
LINC00243-201ENST00000399196 KIF16BQ96L93 1317 aa12.03□□□□□ -0.48
LINC00243-201ENST00000399196 ABCC6O95255 1503 aa12.03□□□□□ -0.48
LINC00243-201ENST00000399196 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.48
LINC00243-201ENST00000399196 ADAMTS2O95450 1211 aa12.02□□□□□ -0.49
LINC00243-201ENST00000399196 PDE4AP27815 886 aa12.02□□□□□ -0.49
LINC00243-201ENST00000399196 ZNF530Q6P9A1 599 aaPredicted RBP12.02□□□□□ -0.49
LINC00243-201ENST00000399196 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
LINC00243-201ENST00000399196 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.49
LINC00243-201ENST00000399196 MS4A1P11836 297 aa12.01□□□□□ -0.49
LINC00243-201ENST00000399196 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
LINC00243-201ENST00000399196 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
LINC00243-201ENST00000399196 BACH2Q9BYV9 841 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms