RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 FAM98CQ17RN3 349 aaKnown RBP24.43■■□□□ 1.5
TTC3-203ENST00000399010 DISP2A7MBM2 1401 aa24.43■■□□□ 1.5
TTC3-203ENST00000399010 PKD1L3Q7Z443 1732 aa24.43■■□□□ 1.5
TTC3-203ENST00000399010 OVOS2A0A0G2JMS6 1433 aa24.43■■□□□ 1.5
TTC3-203ENST00000399010 RGS17Q9UGC6 210 aaPredicted RBP24.42■■□□□ 1.5
TTC3-203ENST00000399010 DLG5Q8TDM6 1919 aa24.42■■□□□ 1.5
TTC3-203ENST00000399010 SHANK3Q9BYB0 1731 aa24.4■■□□□ 1.5
TTC3-203ENST00000399010 BARGINQ6ZT62 677 aa24.4■■□□□ 1.5
TTC3-203ENST00000399010 LRRC37A3O60309 1634 aa24.4■■□□□ 1.5
TTC3-203ENST00000399010 APAF1O14727 1248 aa24.4■■□□□ 1.5
TTC3-203ENST00000399010 RRP7AQ9Y3A4 280 aaKnown RBP24.39■■□□□ 1.49
TTC3-203ENST00000399010 THSD7AQ9UPZ6 1657 aa24.38■■□□□ 1.49
TTC3-203ENST00000399010 A0A0G2JS52 829 aa24.38■■□□□ 1.49
TTC3-203ENST00000399010 MYT1Q01538 1121 aa24.38■■□□□ 1.49
TTC3-203ENST00000399010 MTHFSDQ2M296 383 aaKnown RBP24.38■■□□□ 1.49
TTC3-203ENST00000399010 PLEKHO1Q53GL0 409 aaPredicted RBP24.38■■□□□ 1.49
TTC3-203ENST00000399010 NEUROD2Q15784 382 aa24.37■■□□□ 1.49
TTC3-203ENST00000399010 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
TTC3-203ENST00000399010 CDCA7Q9BWT1 371 aaPredicted RBP24.36■■□□□ 1.49
TTC3-203ENST00000399010 AMOTQ4VCS5 1084 aa24.35■■□□□ 1.49
TTC3-203ENST00000399010 SPG7Q9UQ90 795 aa24.35■■□□□ 1.49
TTC3-203ENST00000399010 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
TTC3-203ENST00000399010 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
TTC3-203ENST00000399010 POTEAQ6S8J7 498 aa24.35■■□□□ 1.49
TTC3-203ENST00000399010 ZCRB1Q8TBF4 217 aaKnown RBP24.35■■□□□ 1.49
TTC3-203ENST00000399010 TMPOP42166 694 aaKnown RBP24.34■■□□□ 1.49
TTC3-203ENST00000399010 RBM6P78332 1123 aaKnown RBP24.34■■□□□ 1.49
TTC3-203ENST00000399010 NFE2L2Q16236 605 aa24.34■■□□□ 1.49
TTC3-203ENST00000399010 PLEKHG2Q9H7P9 1386 aa24.34■■□□□ 1.49
TTC3-203ENST00000399010 VIRMAQ69YN4 1812 aaKnown RBP24.34■■□□□ 1.49
TTC3-203ENST00000399010 HNRNPUQ00839 825 aaKnown RBP eCLIP24.34■■□□□ 1.49
TTC3-203ENST00000399010 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
TTC3-203ENST00000399010 TNS2Q63HR2 1409 aa24.34■■□□□ 1.49
TTC3-203ENST00000399010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.491e-7■■■□□ 15.5
TTC3-203ENST00000399010 DDB1Q16531 1140 aa24.32■■□□□ 1.48
TTC3-203ENST00000399010 EXOC5O00471 708 aa24.32■■□□□ 1.48
TTC3-203ENST00000399010 RXRBP28702 533 aa24.31■■□□□ 1.48
TTC3-203ENST00000399010 RIPK4P57078 832 aa24.31■■□□□ 1.48
TTC3-203ENST00000399010 DDX54Q8TDD1 881 aaKnown RBP24.31■■□□□ 1.48
TTC3-203ENST00000399010 PCDH11XQ9BZA7 1347 aa24.31■■□□□ 1.48
TTC3-203ENST00000399010 PCDH11YQ9BZA8 1340 aa24.31■■□□□ 1.48
TTC3-203ENST00000399010 BRWD3Q6RI45 1802 aa24.3■■□□□ 1.48
TTC3-203ENST00000399010 CYP27B1O15528 508 aa24.29■■□□□ 1.48
TTC3-203ENST00000399010 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
TTC3-203ENST00000399010 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
TTC3-203ENST00000399010 ONECUT3O60422 494 aaPredicted RBP24.29■■□□□ 1.48
TTC3-203ENST00000399010 MAP3K5Q99683 1374 aa24.29■■□□□ 1.48
TTC3-203ENST00000399010 PHKG2P15735 406 aa24.28■■□□□ 1.48
TTC3-203ENST00000399010 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
TTC3-203ENST00000399010 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
TTC3-203ENST00000399010 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
TTC3-203ENST00000399010 SCN11AQ9UI33 1791 aa24.25■■□□□ 1.47
TTC3-203ENST00000399010 DCTN1Q14203 1278 aa24.25■■□□□ 1.47
TTC3-203ENST00000399010 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
TTC3-203ENST00000399010 PDE3BQ13370 1112 aa24.24■■□□□ 1.47
TTC3-203ENST00000399010 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
TTC3-203ENST00000399010 RGS12O14924 1447 aa24.24■■□□□ 1.47
TTC3-203ENST00000399010 MCM10Q7L590 875 aa24.23■■□□□ 1.47
TTC3-203ENST00000399010 RTF1Q92541 710 aaKnown RBP24.23■■□□□ 1.47
TTC3-203ENST00000399010 MARCH10Q8NA82 808 aaPredicted RBP24.23■■□□□ 1.47
TTC3-203ENST00000399010 THUMPD2Q9BTF0 503 aaKnown RBP24.23■■□□□ 1.47
TTC3-203ENST00000399010 LMOD3Q0VAK6 560 aa24.22■■□□□ 1.47
TTC3-203ENST00000399010 TOGARAM1Q9Y4F4 1720 aa24.22■■□□□ 1.47
TTC3-203ENST00000399010 KDM6AO15550 1401 aaPredicted RBP24.22■■□□□ 1.47
TTC3-203ENST00000399010 KAT6BQ8WYB5 2073 aa24.21■■□□□ 1.47
TTC3-203ENST00000399010 ADAMTS7Q9UKP4 1686 aa24.21■■□□□ 1.47
TTC3-203ENST00000399010 DOT1LQ8TEK3 1739 aa24.21■■□□□ 1.47
TTC3-203ENST00000399010 WWC1Q8IX03 1113 aa24.2■■□□□ 1.47
TTC3-203ENST00000399010 LGR6Q9HBX8 967 aa24.2■■□□□ 1.47
TTC3-203ENST00000399010 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
TTC3-203ENST00000399010 CCDC27Q2M243 656 aa24.19■■□□□ 1.46
TTC3-203ENST00000399010 FAM182BQ5T319 152 aa24.19■■□□□ 1.46
TTC3-203ENST00000399010 NGEFQ8N5V2 710 aa24.19■■□□□ 1.46
TTC3-203ENST00000399010 IL17REQ8NFR9 667 aa24.19■■□□□ 1.46
TTC3-203ENST00000399010 HTATSF1O43719 755 aaKnown RBP24.19■■□□□ 1.46
TTC3-203ENST00000399010 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
TTC3-203ENST00000399010 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
TTC3-203ENST00000399010 NKX1-1Q15270 411 aaPredicted RBP24.17■■□□□ 1.46
TTC3-203ENST00000399010 ITGB4P16144 1822 aa24.17■■□□□ 1.46
TTC3-203ENST00000399010 ZBED9Q6R2W3 1325 aa24.17■■□□□ 1.46
TTC3-203ENST00000399010 NCBP3Q53F19 620 aaKnown RBP24.17■■□□□ 1.46
TTC3-203ENST00000399010 KRT27Q7Z3Y8 459 aa24.16■■□□□ 1.46
TTC3-203ENST00000399010 SIPA1L3O60292 1781 aaPredicted RBP24.15■■□□□ 1.46
TTC3-203ENST00000399010 CEMIPQ8WUJ3 1361 aa24.15■■□□□ 1.46
TTC3-203ENST00000399010 ZNF521Q96K83 1311 aa24.15■■□□□ 1.46
TTC3-203ENST00000399010 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
TTC3-203ENST00000399010 TEFQ10587 303 aa24.12■■□□□ 1.45
TTC3-203ENST00000399010 MRC1P22897 1456 aa24.12■■□□□ 1.45
TTC3-203ENST00000399010 ACSBG1Q96GR2 724 aa24.11■■□□□ 1.45
TTC3-203ENST00000399010 LAS1LQ9Y4W2 734 aaKnown RBP24.11■■□□□ 1.45
TTC3-203ENST00000399010 SYTL4Q96C24 671 aaPredicted RBP24.1■■□□□ 1.45
TTC3-203ENST00000399010 CABP4P57796 275 aa24.1■■□□□ 1.45
TTC3-203ENST00000399010 WDR63Q8IWG1 891 aa24.1■■□□□ 1.45
TTC3-203ENST00000399010 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
TTC3-203ENST00000399010 CALD1Q05682 793 aaKnown RBP24.09■■□□□ 1.45
TTC3-203ENST00000399010 NFATC2IPQ8NCF5 419 aa24.09■■□□□ 1.45
TTC3-203ENST00000399010 ERVV-2B6SEH9 535 aa24.08■■□□□ 1.45
TTC3-203ENST00000399010 GOLGA2Q08379 1002 aa24.08■■□□□ 1.45
TTC3-203ENST00000399010 CDCA7LQ96GN5 454 aa24.08■■□□□ 1.45
TTC3-203ENST00000399010 NHSQ6T4R5 1651 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms