RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 FAM161AQ3B820 660 aa32.75■■■□□ 2.83
SHARPIN-202ENST00000398712 TRPM3Q9HCF6 1732 aaPredicted RBP32.75■■■□□ 2.83
SHARPIN-202ENST00000398712 FOXO3O43524 673 aa32.73■■■□□ 2.83
SHARPIN-202ENST00000398712 NCOA3Q9Y6Q9 1424 aa32.73■■■□□ 2.83
SHARPIN-202ENST00000398712 SLIT3O75094 1523 aa32.73■■■□□ 2.83
SHARPIN-202ENST00000398712 LTV1Q96GA3 475 aaPredicted RBP32.72■■■□□ 2.83
SHARPIN-202ENST00000398712 ZBTB40Q9NUA8 1239 aa32.72■■■□□ 2.83
SHARPIN-202ENST00000398712 LRRC37A3O60309 1634 aa32.71■■■□□ 2.83
SHARPIN-202ENST00000398712 HDAC1Q13547 482 aaPredicted RBP32.7■■■□□ 2.83
SHARPIN-202ENST00000398712 DCCP43146 1447 aa32.7■■■□□ 2.83
SHARPIN-202ENST00000398712 API5Q9BZZ5 524 aaKnown RBP32.7■■■□□ 2.82
SHARPIN-202ENST00000398712 STRCP1A6NGW2 1772 aa32.68■■■□□ 2.82
SHARPIN-202ENST00000398712 ABCC4O15439 1325 aa32.68■■■□□ 2.82
SHARPIN-202ENST00000398712 IPO9Q96P70 1041 aaKnown RBP32.68■■■□□ 2.82
SHARPIN-202ENST00000398712 GNAT3A8MTJ3 354 aa32.67■■■□□ 2.82
SHARPIN-202ENST00000398712 KRT28Q7Z3Y7 464 aa32.67■■■□□ 2.82
SHARPIN-202ENST00000398712 TMEM94Q12767 1356 aa32.66■■■□□ 2.82
SHARPIN-202ENST00000398712 ATF3P18847 181 aa32.66■■■□□ 2.82
SHARPIN-202ENST00000398712 C8orf34Q49A92 452 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 ERICH6Q7L0X2 663 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 STRCQ7RTU9 1775 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 MST1RQ04912 1400 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 XPCQ01831 940 aaPredicted RBP32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 PDZRN3Q9UPQ7 1066 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 USP19O94966 1318 aa32.65■■■□□ 2.82
SHARPIN-202ENST00000398712 VIRMAQ69YN4 1812 aaKnown RBP32.64■■■□□ 2.82
SHARPIN-202ENST00000398712 MAP3K5Q99683 1374 aa32.64■■■□□ 2.82
SHARPIN-202ENST00000398712 GCP02774 474 aa32.64■■■□□ 2.82
SHARPIN-202ENST00000398712 TSPYL4Q9UJ04 414 aa32.64■■■□□ 2.82
SHARPIN-202ENST00000398712 NPM2Q86SE8 214 aaKnown RBP32.63■■■□□ 2.81
SHARPIN-202ENST00000398712 ARHGEF25Q86VW2 580 aa32.61■■■□□ 2.81
SHARPIN-202ENST00000398712 ANP32EQ9BTT0 268 aa32.61■■■□□ 2.81
SHARPIN-202ENST00000398712 ALS2Q96Q42 1657 aa32.6■■■□□ 2.81
SHARPIN-202ENST00000398712 MSH6P52701 1360 aa32.6■■■□□ 2.81
SHARPIN-202ENST00000398712 ZBTB7CA1YPR0 619 aa32.6■■■□□ 2.81
SHARPIN-202ENST00000398712 KRT24Q2M2I5 525 aa32.6■■■□□ 2.81
SHARPIN-202ENST00000398712 LMOD2Q6P5Q4 547 aa32.6■■■□□ 2.81
SHARPIN-202ENST00000398712 ZBTB7BO15156 539 aaPredicted RBP32.59■■■□□ 2.81
SHARPIN-202ENST00000398712 USHBP1Q8N6Y0 703 aa32.58■■■□□ 2.81
SHARPIN-202ENST00000398712 NBPF6Q5VWK0 638 aa32.58■■■□□ 2.81
SHARPIN-202ENST00000398712 NBPF4Q96M43 638 aa32.58■■■□□ 2.81
SHARPIN-202ENST00000398712 BABAM1Q9NWV8 329 aa32.58■■■□□ 2.81
SHARPIN-202ENST00000398712 NOP58Q9Y2X3 529 aaKnown RBP32.58■■■□□ 2.81
SHARPIN-202ENST00000398712 RGPD2P0DJD1 1756 aa32.56■■■□□ 2.8
SHARPIN-202ENST00000398712 MIS18AQ9NYP9 233 aa32.56■■■□□ 2.8
SHARPIN-202ENST00000398712 PTPRCP08575 1304 aa32.56■■■□□ 2.8
SHARPIN-202ENST00000398712 SMC5Q8IY18 1101 aa32.55■■■□□ 2.8
SHARPIN-202ENST00000398712 CADPS2Q86UW7 1296 aa32.55■■■□□ 2.8
SHARPIN-202ENST00000398712 SOS1Q07889 1333 aaPredicted RBP32.52■■■□□ 2.8
SHARPIN-202ENST00000398712 NCAPD2Q15021 1401 aa32.52■■■□□ 2.8
SHARPIN-202ENST00000398712 ZBTB47Q9UFB7 747 aaPredicted RBP32.52■■■□□ 2.8
SHARPIN-202ENST00000398712 IL17REQ8NFR9 667 aa32.51■■■□□ 2.79
SHARPIN-202ENST00000398712 CAMTA1Q9Y6Y1 1673 aa32.51■■■□□ 2.79
SHARPIN-202ENST00000398712 TAF7Q15545 349 aaPredicted RBP32.5■■■□□ 2.79
SHARPIN-202ENST00000398712 INTS3Q68E01 1043 aaKnown RBP32.5■■■□□ 2.79
SHARPIN-202ENST00000398712 RGS12O14924 1447 aa32.49■■■□□ 2.79
SHARPIN-202ENST00000398712 LMO7Q8WWI1 1683 aa32.48■■■□□ 2.79
SHARPIN-202ENST00000398712 ANKRD24Q8TF21 1146 aa32.47■■■□□ 2.79
SHARPIN-202ENST00000398712 DDRGK1Q96HY6 314 aa32.47■■■□□ 2.79
SHARPIN-202ENST00000398712 NPHP3Q7Z494 1330 aa32.47■■■□□ 2.79
SHARPIN-202ENST00000398712 LRRC59Q96AG4 307 aaKnown RBP32.47■■■□□ 2.79
SHARPIN-202ENST00000398712 MED1Q15648 1581 aaPredicted RBP32.46■■■□□ 2.79
SHARPIN-202ENST00000398712 CEMIPQ8WUJ3 1361 aa32.46■■■□□ 2.79
SHARPIN-202ENST00000398712 SLC4A2P04920 1241 aa32.46■■■□□ 2.79
SHARPIN-202ENST00000398712 PLEKHO1Q53GL0 409 aaPredicted RBP32.46■■■□□ 2.79
SHARPIN-202ENST00000398712 PLEKHG5O94827 1062 aa32.45■■■□□ 2.79
SHARPIN-202ENST00000398712 AMOTQ4VCS5 1084 aa32.45■■■□□ 2.79
SHARPIN-202ENST00000398712 FAM208AQ9UK61 1670 aaKnown RBP32.43■■■□□ 2.78
SHARPIN-202ENST00000398712 XIRP1Q702N8 1843 aaKnown RBP32.43■■■□□ 2.78
SHARPIN-202ENST00000398712 GCC1Q96CN9 775 aa32.43■■■□□ 2.78
SHARPIN-202ENST00000398712 STK31Q9BXU1 1019 aa32.43■■■□□ 2.78
SHARPIN-202ENST00000398712 CACNA1FO60840 1977 aa32.42■■■□□ 2.78
SHARPIN-202ENST00000398712 NUCB1Q02818 461 aa32.42■■■□□ 2.78
SHARPIN-202ENST00000398712 AKAP4Q5JQC9 854 aa32.42■■■□□ 2.78
SHARPIN-202ENST00000398712 CCDC30Q5VVM6 783 aa32.42■■■□□ 2.78
SHARPIN-202ENST00000398712 RGPD5Q99666 1765 aa32.41■■■□□ 2.78
SHARPIN-202ENST00000398712 C1orf115Q9H7X2 142 aa32.41■■■□□ 2.78
SHARPIN-202ENST00000398712 TNS3Q68CZ2 1445 aa32.4■■■□□ 2.78
SHARPIN-202ENST00000398712 ZNF530Q6P9A1 599 aaPredicted RBP32.4■■■□□ 2.78
SHARPIN-202ENST00000398712 AXIN2Q9Y2T1 843 aa32.38■■■□□ 2.77
SHARPIN-202ENST00000398712 PXDNQ92626 1479 aa32.37■■■□□ 2.77
SHARPIN-202ENST00000398712 KDM3BQ7LBC6 1761 aa32.37■■■□□ 2.77
SHARPIN-202ENST00000398712 OVOS2A0A0G2JMS6 1433 aa32.37■■■□□ 2.77
SHARPIN-202ENST00000398712 ERBB3P21860 1342 aa32.36■■■□□ 2.77
SHARPIN-202ENST00000398712 ZC3H6P61129 1189 aaKnown RBP32.35■■■□□ 2.77
SHARPIN-202ENST00000398712 C1orf141Q5JVX7 400 aa32.35■■■□□ 2.77
SHARPIN-202ENST00000398712 CHD1LQ86WJ1 897 aa32.35■■■□□ 2.77
SHARPIN-202ENST00000398712 DDX17Q92841 729 aaKnown RBP32.35■■■□□ 2.77
SHARPIN-202ENST00000398712 ABCC6O95255 1503 aa32.35■■■□□ 2.77
SHARPIN-202ENST00000398712 CCT4P50991 539 aaKnown RBP32.33■■■□□ 2.77
SHARPIN-202ENST00000398712 SIRT2Q8IXJ6 389 aa32.33■■■□□ 2.77
SHARPIN-202ENST00000398712 G2E3Q7L622 706 aa32.32■■■□□ 2.77
SHARPIN-202ENST00000398712 LGR6Q9HBX8 967 aa32.32■■■□□ 2.77
SHARPIN-202ENST00000398712 TEFQ10587 303 aa32.32■■■□□ 2.76
SHARPIN-202ENST00000398712 CHMP4AQ9BY43 222 aa32.32■■■□□ 2.76
SHARPIN-202ENST00000398712 SPATA31A3Q5VYP0 1347 aa32.31■■■□□ 2.76
SHARPIN-202ENST00000398712 CRYBG1Q9Y4K1 1723 aa32.31■■■□□ 2.76
SHARPIN-202ENST00000398712 COL18A1P39060 1754 aa32.31■■■□□ 2.76
SHARPIN-202ENST00000398712 HOXB7P09629 217 aa32.3■■■□□ 2.76
SHARPIN-202ENST00000398712 RPAP2Q8IXW5 612 aaPredicted RBP32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms