RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 CCDC66A2RUB6 948 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 ANKRD7Q92527 254 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 CGNQ9P2M7 1197 aaKnown RBP14.08□□□□□ -0.16
PUM3-202ENST00000397885 PHLPP1O60346 1717 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 RLBP1P12271 317 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 SPTLC3Q9NUV7 552 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 IFT172Q9UG01 1749 aa14.08□□□□□ -0.16
PUM3-202ENST00000397885 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.08□□□□□ -0.16
PUM3-202ENST00000397885 NOLC1Q14978 699 aaKnown RBP eCLIP14.07□□□□□ -0.16
PUM3-202ENST00000397885 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 MYOM2P54296 1465 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
PUM3-202ENST00000397885 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
PUM3-202ENST00000397885 DIAPH3Q9NSV4 1193 aa14.07□□□□□ -0.16
PUM3-202ENST00000397885 PTMAP06454 111 aaKnown RBP14.06□□□□□ -0.16
PUM3-202ENST00000397885 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
PUM3-202ENST00000397885 FAM193AP78312 1265 aa14.06□□□□□ -0.16
PUM3-202ENST00000397885 GAS2L2Q8NHY3 880 aa14.06□□□□□ -0.16
PUM3-202ENST00000397885 PTCH1Q13635 1447 aa14.05□□□□□ -0.16
PUM3-202ENST00000397885 SYCP1Q15431 976 aa14.05□□□□□ -0.16
PUM3-202ENST00000397885 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
PUM3-202ENST00000397885 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
PUM3-202ENST00000397885 ADGRL3Q9HAR2 1447 aa14.05□□□□□ -0.16
PUM3-202ENST00000397885 MBD3O95983 291 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
PUM3-202ENST00000397885 BMP2KLQ5H9B9 411 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 VGLL3A8MV65 326 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 UVSSAQ2YD98 709 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 WDR63Q8IWG1 891 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
PUM3-202ENST00000397885 CTIFO43310 598 aaKnown RBP14.03□□□□□ -0.16
PUM3-202ENST00000397885 TSPYL1Q9H0U9 437 aa14.03□□□□□ -0.16
PUM3-202ENST00000397885 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
PUM3-202ENST00000397885 FAM184AQ8NB25 1140 aa14.03□□□□□ -0.16
PUM3-202ENST00000397885 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
PUM3-202ENST00000397885 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.16
PUM3-202ENST00000397885 CT47B1P0C2W7 299 aaPredicted RBP14.02□□□□□ -0.16
PUM3-202ENST00000397885 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.16
PUM3-202ENST00000397885 GPT2Q8TD30 523 aa14.02□□□□□ -0.16
PUM3-202ENST00000397885 SOCS7O14512 581 aa14.02□□□□□ -0.17
PUM3-202ENST00000397885 ZKSCAN2Q63HK3 967 aa14.02□□□□□ -0.17
PUM3-202ENST00000397885 CFAP44Q96MT7 982 aa14.02□□□□□ -0.17
PUM3-202ENST00000397885 JCADQ9P266 1359 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 COL16A1Q07092 1604 aaPredicted RBP14.01□□□□□ -0.17
PUM3-202ENST00000397885 MST1RQ04912 1400 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 CREBRFQ8IUR6 639 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 TIGD1Q96MW7 591 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
PUM3-202ENST00000397885 ROBO2Q9HCK4 1378 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 NUCB1Q02818 461 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 RABEP1Q15276 862 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
PUM3-202ENST00000397885 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
PUM3-202ENST00000397885 BRINP3Q76B58 766 aa14□□□□□ -0.17
PUM3-202ENST00000397885 TEX2Q8IWB9 1127 aa14□□□□□ -0.17
PUM3-202ENST00000397885 KLHL34Q8N239 644 aa14□□□□□ -0.17
PUM3-202ENST00000397885 TSC1Q92574 1164 aa14□□□□□ -0.17
PUM3-202ENST00000397885 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
PUM3-202ENST00000397885 TMEM63CQ9P1W3 806 aa14□□□□□ -0.17
PUM3-202ENST00000397885 SYCE3A1L190 88 aa13.99□□□□□ -0.17
PUM3-202ENST00000397885 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
PUM3-202ENST00000397885 U2AF2P26368 475 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■□□ 18.4
PUM3-202ENST00000397885 CCDC27Q2M243 656 aa13.99□□□□□ -0.17
PUM3-202ENST00000397885 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
PUM3-202ENST00000397885 TULP2O00295 520 aa13.99□□□□□ -0.17
PUM3-202ENST00000397885 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
PUM3-202ENST00000397885 SLFN14P0C7P3 912 aa13.99□□□□□ -0.17
PUM3-202ENST00000397885 SYAP1Q96A49 352 aaPredicted RBP13.99□□□□□ -0.17
PUM3-202ENST00000397885 KCNJ4P48050 445 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
PUM3-202ENST00000397885 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 JARID2Q92833 1246 aaPredicted RBP13.98□□□□□ -0.17
PUM3-202ENST00000397885 CALCOCO1Q9P1Z2 691 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 PHF14O94880 888 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 TPM3P06753 285 aa13.98□□□□□ -0.17
PUM3-202ENST00000397885 NRXN1Q9ULB1 1477 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
PUM3-202ENST00000397885 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 TECPR2O15040 1411 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 CFAP70Q5T0N1 1121 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 C14orf93Q9H972 538 aaKnown RBP13.97□□□□□ -0.17
PUM3-202ENST00000397885 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
PUM3-202ENST00000397885 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
PUM3-202ENST00000397885 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
PUM3-202ENST00000397885 SPATA31A6Q5VVP1 1343 aa13.96□□□□□ -0.17
PUM3-202ENST00000397885 DDX41Q9UJV9 622 aaKnown RBP13.96□□□□□ -0.17
PUM3-202ENST00000397885 ZBTB22O15209 634 aa13.96□□□□□ -0.18
PUM3-202ENST00000397885 SIRT1Q96EB6 747 aa13.96□□□□□ -0.18
PUM3-202ENST00000397885 C1orf167Q5SNV9 1468 aa13.96□□□□□ -0.18
PUM3-202ENST00000397885 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 CARD14Q9BXL6 1004 aa13.95□□□□□ -0.18
PUM3-202ENST00000397885 STK26Q9P289 416 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms