RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 PTGER2P43116 358 aa19.86■□□□□ 0.77
SNRNP25-203ENST00000397876 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
SNRNP25-203ENST00000397876 INSRP06213 1382 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 SLC27A3Q5K4L6 730 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 NBPF6Q5VWK0 638 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 RAPGEF4Q8WZA2 1011 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 NBPF4Q96M43 638 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
SNRNP25-203ENST00000397876 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
SNRNP25-203ENST00000397876 PRIM1P49642 420 aaKnown RBP19.83■□□□□ 0.77
SNRNP25-203ENST00000397876 ZNF827Q17R98 1081 aa19.83■□□□□ 0.77
SNRNP25-203ENST00000397876 LRRC4BQ9NT99 713 aa19.83■□□□□ 0.77
SNRNP25-203ENST00000397876 TATP17735 454 aaPredicted RBP19.82■□□□□ 0.76
SNRNP25-203ENST00000397876 HSP90AB2PQ58FF8 381 aa19.82■□□□□ 0.76
SNRNP25-203ENST00000397876 CARD14Q9BXL6 1004 aa19.82■□□□□ 0.76
SNRNP25-203ENST00000397876 NSD2O96028 1365 aa19.82■□□□□ 0.76
SNRNP25-203ENST00000397876 LY75O60449 1722 aa19.8■□□□□ 0.76
SNRNP25-203ENST00000397876 QSER1Q2KHR3 1735 aa19.8■□□□□ 0.76
SNRNP25-203ENST00000397876 YY1P25490 414 aa19.8■□□□□ 0.76
SNRNP25-203ENST00000397876 AKT1S1Q96B36 256 aa19.79■□□□□ 0.76
SNRNP25-203ENST00000397876 PCDH11XQ9BZA7 1347 aa19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 PCDH11YQ9BZA8 1340 aa19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 SGIP1Q9BQI5 828 aa19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 FHDC1Q9C0D6 1143 aaPredicted RBP19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 EMILIN1Q9Y6C2 1016 aa19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 ANKRD26Q9UPS8 1709 aa19.78■□□□□ 0.76
SNRNP25-203ENST00000397876 ARXQ96QS3 562 aa19.76■□□□□ 0.75
SNRNP25-203ENST00000397876 POLR3GLQ9BT43 218 aa19.76■□□□□ 0.75
SNRNP25-203ENST00000397876 CCNL1Q9UK58 526 aaPredicted RBP19.76■□□□□ 0.75
SNRNP25-203ENST00000397876 TUBGCP6Q96RT7 1819 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 KCNQ4P56696 695 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 SLC16A10Q8TF71 515 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
SNRNP25-203ENST00000397876 PKD1L3Q7Z443 1732 aa19.74■□□□□ 0.75
SNRNP25-203ENST00000397876 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
SNRNP25-203ENST00000397876 MAP3K5Q99683 1374 aa19.72■□□□□ 0.75
SNRNP25-203ENST00000397876 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.75
SNRNP25-203ENST00000397876 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
SNRNP25-203ENST00000397876 POLD1P28340 1107 aa19.71■□□□□ 0.75
SNRNP25-203ENST00000397876 MAP2P11137 1827 aaKnown RBP19.7■□□□□ 0.74
SNRNP25-203ENST00000397876 CYP27B1O15528 508 aa19.7■□□□□ 0.74
SNRNP25-203ENST00000397876 COL24A1Q17RW2 1714 aa19.7■□□□□ 0.74
SNRNP25-203ENST00000397876 TOGARAM1Q9Y4F4 1720 aa19.7■□□□□ 0.74
SNRNP25-203ENST00000397876 C5P01031 1676 aa19.69■□□□□ 0.74
SNRNP25-203ENST00000397876 HMGB2P26583 209 aaKnown RBP19.69■□□□□ 0.74
SNRNP25-203ENST00000397876 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
SNRNP25-203ENST00000397876 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
SNRNP25-203ENST00000397876 HSPA5P11021 654 aaKnown RBP19.68■□□□□ 0.74
SNRNP25-203ENST00000397876 MPRIPQ6WCQ1 1025 aa19.68■□□□□ 0.74
SNRNP25-203ENST00000397876 POLKQ9UBT6 870 aa19.68■□□□□ 0.74
SNRNP25-203ENST00000397876 SPG7Q9UQ90 795 aa19.68■□□□□ 0.74
SNRNP25-203ENST00000397876 MSH5O43196 834 aa19.66■□□□□ 0.74
SNRNP25-203ENST00000397876 KLHL34Q8N239 644 aa19.66■□□□□ 0.74
SNRNP25-203ENST00000397876 EYA1Q99502 592 aa19.66■□□□□ 0.74
SNRNP25-203ENST00000397876 ITGB4P16144 1822 aa19.66■□□□□ 0.74
SNRNP25-203ENST00000397876 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
SNRNP25-203ENST00000397876 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
SNRNP25-203ENST00000397876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.64■□□□□ 0.73
SNRNP25-203ENST00000397876 TAF1LQ8IZX4 1826 aa19.63■□□□□ 0.73
SNRNP25-203ENST00000397876 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
SNRNP25-203ENST00000397876 PLEKHG2Q9H7P9 1386 aa19.62■□□□□ 0.73
SNRNP25-203ENST00000397876 EIF4A2Q14240 407 aaKnown RBP19.62■□□□□ 0.73
SNRNP25-203ENST00000397876 COL23A1Q86Y22 540 aaPredicted RBP19.62■□□□□ 0.73
SNRNP25-203ENST00000397876 PANK3Q9H999 370 aa19.62■□□□□ 0.73
SNRNP25-203ENST00000397876 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
SNRNP25-203ENST00000397876 PIGBQ92521 554 aa19.61■□□□□ 0.73
SNRNP25-203ENST00000397876 C4BP0C0L5 1744 aa19.61■□□□□ 0.73
SNRNP25-203ENST00000397876 GPR162Q16538 588 aa19.6■□□□□ 0.73
SNRNP25-203ENST00000397876 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
SNRNP25-203ENST00000397876 AK7Q96M32 723 aa19.6■□□□□ 0.73
SNRNP25-203ENST00000397876 TMOD3Q9NYL9 352 aa19.6■□□□□ 0.73
SNRNP25-203ENST00000397876 CHD4Q14839 1912 aa19.59■□□□□ 0.73
SNRNP25-203ENST00000397876 PHKG2P15735 406 aa19.59■□□□□ 0.73
SNRNP25-203ENST00000397876 IGSF1Q8N6C5 1336 aa19.58■□□□□ 0.73
SNRNP25-203ENST00000397876 MSL1Q68DK7 614 aa19.58■□□□□ 0.72
SNRNP25-203ENST00000397876 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
SNRNP25-203ENST00000397876 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
SNRNP25-203ENST00000397876 NLGN2Q8NFZ4 835 aa19.56■□□□□ 0.72
SNRNP25-203ENST00000397876 UTRNP46939 3433 aa19.56■□□□□ 0.72
SNRNP25-203ENST00000397876 LOC102724428A0A0B4J2F2 783 aa19.55■□□□□ 0.72
SNRNP25-203ENST00000397876 SIK1P57059 783 aa19.55■□□□□ 0.72
SNRNP25-203ENST00000397876 ZNF784Q8NCA9 323 aaPredicted RBP19.55■□□□□ 0.72
SNRNP25-203ENST00000397876 UBR3Q6ZT12 1888 aa19.54■□□□□ 0.72
SNRNP25-203ENST00000397876 KNSTRNQ9Y448 316 aa19.54■□□□□ 0.72
SNRNP25-203ENST00000397876 PHF14O94880 888 aa19.53■□□□□ 0.72
SNRNP25-203ENST00000397876 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
SNRNP25-203ENST00000397876 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
SNRNP25-203ENST00000397876 PLEKHO1Q53GL0 409 aaPredicted RBP19.52■□□□□ 0.72
SNRNP25-203ENST00000397876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
SNRNP25-203ENST00000397876 SSFA2P28290 1259 aa19.51■□□□□ 0.71
SNRNP25-203ENST00000397876 LINC00116Q8NCU8 138 aa19.51■□□□□ 0.71
SNRNP25-203ENST00000397876 ATP6V1AP38606 617 aa19.5■□□□□ 0.71
SNRNP25-203ENST00000397876 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
SNRNP25-203ENST00000397876 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
SNRNP25-203ENST00000397876 DCAF5Q96JK2 942 aa19.5■□□□□ 0.71
SNRNP25-203ENST00000397876 ATG3Q9NT62 314 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms