RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 MVPQ14764 893 aaKnown RBP18.68■□□□□ 0.58
LSS-202ENST00000397728 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
LSS-202ENST00000397728 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
LSS-202ENST00000397728 RBM5P52756 815 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■□□□□ 9.6
LSS-202ENST00000397728 F6X3S4 739 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
LSS-202ENST00000397728 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 FOXD4L6Q3SYB3 417 aaPredicted RBP18.67■□□□□ 0.58
LSS-202ENST00000397728 FOXD4L3Q6VB84 417 aaPredicted RBP18.67■□□□□ 0.58
LSS-202ENST00000397728 NRDCO43847 1150 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
LSS-202ENST00000397728 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 FLT4P35916 1363 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
LSS-202ENST00000397728 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 GCC1Q96CN9 775 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 HYPKQ9NX55 129 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
LSS-202ENST00000397728 RFC4P35249 363 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
LSS-202ENST00000397728 TMEM57Q8N5G2 664 aa18.65■□□□□ 0.58
LSS-202ENST00000397728 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
LSS-202ENST00000397728 ANXA1P04083 346 aa18.65■□□□□ 0.58
LSS-202ENST00000397728 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
LSS-202ENST00000397728 TRIM29Q14134 588 aa18.65■□□□□ 0.58
LSS-202ENST00000397728 A0A1W2PP64 1363 aa18.65■□□□□ 0.58
LSS-202ENST00000397728 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
LSS-202ENST00000397728 AACSQ86V21 672 aa18.65■□□□□ 0.58
LSS-202ENST00000397728 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.58
LSS-202ENST00000397728 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
LSS-202ENST00000397728 CDC45O75419 566 aa18.64■□□□□ 0.57
LSS-202ENST00000397728 DNAAF4Q8WXU2 420 aa18.64■□□□□ 0.57
LSS-202ENST00000397728 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.57
LSS-202ENST00000397728 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
LSS-202ENST00000397728 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
LSS-202ENST00000397728 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
LSS-202ENST00000397728 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
LSS-202ENST00000397728 CARD14Q9BXL6 1004 aa18.63■□□□□ 0.57
LSS-202ENST00000397728 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
LSS-202ENST00000397728 TCEAL9Q9UHQ7 104 aa18.63■□□□□ 0.57
LSS-202ENST00000397728 A0A087WZG4 1122 aa18.63■□□□□ 0.57
LSS-202ENST00000397728 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.63■□□□□ 0.574e-8■■■■□ 24.6
LSS-202ENST00000397728 TTC37Q6PGP7 1564 aa18.62■□□□□ 0.57
LSS-202ENST00000397728 ATP5J2-PTCD1G3V325 749 aa18.62■□□□□ 0.57
LSS-202ENST00000397728 RRP12Q5JTH9 1297 aaKnown RBP18.62■□□□□ 0.57
LSS-202ENST00000397728 FLIIQ13045 1269 aa18.62■□□□□ 0.57
LSS-202ENST00000397728 MLH3Q9UHC1 1453 aa18.62■□□□□ 0.57
LSS-202ENST00000397728 DRC7Q8IY82 874 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 EYA1Q99502 592 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
LSS-202ENST00000397728 IP6K1Q92551 441 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 RPGRQ92834 1020 aaKnown RBP18.61■□□□□ 0.57
LSS-202ENST00000397728 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 HOXC9P31274 260 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
LSS-202ENST00000397728 ANKIB1Q9P2G1 1089 aa18.61■□□□□ 0.57
LSS-202ENST00000397728 CSPP1Q1MSJ5 1256 aa18.6■□□□□ 0.57
LSS-202ENST00000397728 ABCF2Q9UG63 623 aa18.6■□□□□ 0.57
LSS-202ENST00000397728 RARSP54136 660 aaKnown RBP18.6■□□□□ 0.57
LSS-202ENST00000397728 IFIT5Q13325 482 aaKnown RBP18.6■□□□□ 0.57
LSS-202ENST00000397728 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
LSS-202ENST00000397728 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
LSS-202ENST00000397728 RPAP2Q8IXW5 612 aaPredicted RBP18.6■□□□□ 0.57
LSS-202ENST00000397728 RAI14Q9P0K7 980 aa18.6■□□□□ 0.57
LSS-202ENST00000397728 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
LSS-202ENST00000397728 NFATC2IPQ8NCF5 419 aa18.59■□□□□ 0.57
LSS-202ENST00000397728 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
LSS-202ENST00000397728 STK11IPQ8N1F8 1099 aa18.59■□□□□ 0.57
LSS-202ENST00000397728 ALDH1L2Q3SY69 923 aa18.59■□□□□ 0.57
LSS-202ENST00000397728 SYAP1Q96A49 352 aaPredicted RBP18.59■□□□□ 0.57
LSS-202ENST00000397728 LRP2BPQ9P2M1 347 aa18.59■□□□□ 0.57
LSS-202ENST00000397728 ATP2B2Q01814 1243 aa18.58■□□□□ 0.57
LSS-202ENST00000397728 MTHFSDQ2M296 383 aaKnown RBP18.58■□□□□ 0.57
LSS-202ENST00000397728 HIP1O00291 1037 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 ZSCAN29Q8IWY8 852 aaPredicted RBP18.58■□□□□ 0.56
LSS-202ENST00000397728 ARHGEF5Q12774 1597 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 SLC3A2P08195 630 aaKnown RBP18.58■□□□□ 0.56
LSS-202ENST00000397728 CREBRFQ8IUR6 639 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.56
LSS-202ENST00000397728 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
LSS-202ENST00000397728 MAP3K2Q9Y2U5 619 aa18.57■□□□□ 0.56
LSS-202ENST00000397728 SART3Q15020 963 aaKnown RBP18.57■□□□□ 0.56
LSS-202ENST00000397728 ARHGEF12Q9NZN5 1544 aa18.57■□□□□ 0.56
LSS-202ENST00000397728 SAMD9LQ8IVG5 1584 aa18.57■□□□□ 0.56
LSS-202ENST00000397728 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
LSS-202ENST00000397728 FOSBP53539 338 aa18.56■□□□□ 0.56
LSS-202ENST00000397728 IFIT1P09914 478 aaKnown RBP18.56■□□□□ 0.56
LSS-202ENST00000397728 PIP4K2AP48426 406 aaPredicted RBP18.56■□□□□ 0.56
LSS-202ENST00000397728 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
LSS-202ENST00000397728 NACAP1Q9BZK3 213 aa18.56■□□□□ 0.56
LSS-202ENST00000397728 NBPF6Q5VWK0 638 aa18.55■□□□□ 0.56
LSS-202ENST00000397728 UBE3BQ7Z3V4 1068 aa18.55■□□□□ 0.56
LSS-202ENST00000397728 NBPF5PQ86XG9 351 aaPredicted RBP18.55■□□□□ 0.56
LSS-202ENST00000397728 NBPF4Q96M43 638 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms