RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 CEP85Q6P2H3 762 aa26.98■■□□□ 1.91
NFIX-203ENST00000397661 MSH6P52701 1360 aa26.97■■□□□ 1.91
NFIX-203ENST00000397661 CPSF1Q10570 1443 aaKnown RBP26.97■■□□□ 1.91
NFIX-203ENST00000397661 TTC22Q5TAA0 569 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.96■■□□□ 1.91
NFIX-203ENST00000397661 NGDNQ8NEJ9 315 aaKnown RBP26.96■■□□□ 1.91
NFIX-203ENST00000397661 ERBB4Q15303 1308 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 PTCH1Q13635 1447 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 ATP7BP35670 1465 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 AMPHP49418 695 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 MTHFSDQ2M296 383 aaKnown RBP26.96■■□□□ 1.91
NFIX-203ENST00000397661 ROBO2Q9HCK4 1378 aa26.96■■□□□ 1.91
NFIX-203ENST00000397661 RBM33Q96EV2 1170 aaKnown RBP26.95■■□□□ 1.91
NFIX-203ENST00000397661 LTKP29376 864 aa26.95■■□□□ 1.9
NFIX-203ENST00000397661 VSIG10Q8N0Z9 540 aa26.94■■□□□ 1.9
NFIX-203ENST00000397661 TRIM44Q96DX7 344 aaPredicted RBP26.94■■□□□ 1.9
NFIX-203ENST00000397661 KIF20BQ96Q89 1820 aa26.94■■□□□ 1.9
NFIX-203ENST00000397661 CHL1O00533 1208 aa26.94■■□□□ 1.9
NFIX-203ENST00000397661 RAB3GAP1Q15042 981 aa26.94■■□□□ 1.9
NFIX-203ENST00000397661 ANKRD44Q8N8A2 993 aa26.94■■□□□ 1.9
NFIX-203ENST00000397661 FOXD4L6Q3SYB3 417 aaPredicted RBP26.93■■□□□ 1.9
NFIX-203ENST00000397661 MCTP1Q6DN14 999 aa26.93■■□□□ 1.9
NFIX-203ENST00000397661 FOXD4L3Q6VB84 417 aaPredicted RBP26.93■■□□□ 1.9
NFIX-203ENST00000397661 HSP90AA2PQ14568 343 aaPredicted RBP26.93■■□□□ 1.9
NFIX-203ENST00000397661 ESPNB1AK53 854 aa26.92■■□□□ 1.9
NFIX-203ENST00000397661 CLTCQ00610 1675 aaKnown RBP26.92■■□□□ 1.9
NFIX-203ENST00000397661 DDIT3P35638 169 aa26.92■■□□□ 1.9
NFIX-203ENST00000397661 DDX49Q9Y6V7 483 aaKnown RBP26.92■■□□□ 1.9
NFIX-203ENST00000397661 MAP3K19Q56UN5 1328 aa26.92■■□□□ 1.9
NFIX-203ENST00000397661 INTS3Q68E01 1043 aaKnown RBP26.92■■□□□ 1.9
NFIX-203ENST00000397661 ZGPATQ8N5A5 531 aaKnown RBP26.92■■□□□ 1.9
NFIX-203ENST00000397661 HDGFP51858 240 aaKnown RBP26.9■■□□□ 1.9
NFIX-203ENST00000397661 FKBP5Q13451 457 aaPredicted RBP26.9■■□□□ 1.9
NFIX-203ENST00000397661 ANKRD26Q9UPS8 1709 aa26.9■■□□□ 1.9
NFIX-203ENST00000397661 USHBP1Q8N6Y0 703 aa26.9■■□□□ 1.9
NFIX-203ENST00000397661 RILPL2Q969X0 211 aa26.89■■□□□ 1.89
NFIX-203ENST00000397661 PIK3R4Q99570 1358 aa26.88■■□□□ 1.89
NFIX-203ENST00000397661 USP26Q9BXU7 913 aa26.88■■□□□ 1.89
NFIX-203ENST00000397661 CDK12Q9NYV4 1490 aaPredicted RBP26.88■■□□□ 1.89
NFIX-203ENST00000397661 AK9Q5TCS8 1911 aa26.88■■□□□ 1.89
NFIX-203ENST00000397661 TRIM6-TRIM34B2RNG4 842 aa26.87■■□□□ 1.89
NFIX-203ENST00000397661 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
NFIX-203ENST00000397661 NLRP6P59044 892 aa26.86■■□□□ 1.89
NFIX-203ENST00000397661 RPAP2Q8IXW5 612 aaPredicted RBP26.86■■□□□ 1.89
NFIX-203ENST00000397661 RTL1A6NKG5 1358 aa26.85■■□□□ 1.89
NFIX-203ENST00000397661 EYA1Q99502 592 aa26.85■■□□□ 1.89
NFIX-203ENST00000397661 CASC1Q6TDU7 716 aa26.85■■□□□ 1.89
NFIX-203ENST00000397661 BAG4O95429 457 aaKnown RBP26.84■■□□□ 1.89
NFIX-203ENST00000397661 MAP4K4O95819 1239 aaPredicted RBP26.84■■□□□ 1.89
NFIX-203ENST00000397661 GOLGA6L22H0YM25 854 aa26.84■■□□□ 1.89
NFIX-203ENST00000397661 STK31Q9BXU1 1019 aa26.83■■□□□ 1.89
NFIX-203ENST00000397661 AMOTL2Q9Y2J4 779 aa26.83■■□□□ 1.89
NFIX-203ENST00000397661 IL1RAPL2Q9NP60 686 aa26.83■■□□□ 1.89
NFIX-203ENST00000397661 CAVIN1Q6NZI2 390 aaKnown RBP26.83■■□□□ 1.88
NFIX-203ENST00000397661 EIF2S2P20042 333 aaKnown RBP26.82■■□□□ 1.88
NFIX-203ENST00000397661 CIZ1Q9ULV3 898 aaPredicted RBP26.82■■□□□ 1.88
NFIX-203ENST00000397661 DTNBO60941 627 aa26.82■■□□□ 1.88
NFIX-203ENST00000397661 RABEP1Q15276 862 aa26.82■■□□□ 1.88
NFIX-203ENST00000397661 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
NFIX-203ENST00000397661 PNMA6EA0A0J9YXQ4 647 aa26.81■■□□□ 1.88
NFIX-203ENST00000397661 GLIPR1L2Q4G1C9 344 aa26.81■■□□□ 1.88
NFIX-203ENST00000397661 NCOA3Q9Y6Q9 1424 aa26.8■■□□□ 1.88
NFIX-203ENST00000397661 NEK4P51957 841 aa26.8■■□□□ 1.88
NFIX-203ENST00000397661 PRPF40AO75400 957 aaKnown RBP26.8■■□□□ 1.88
NFIX-203ENST00000397661 TNRQ92752 1358 aa26.79■■□□□ 1.88
NFIX-203ENST00000397661 ATP10DQ9P241 1426 aa26.79■■□□□ 1.88
NFIX-203ENST00000397661 HMMRO75330 724 aa26.79■■□□□ 1.88
NFIX-203ENST00000397661 PDE1AP54750 535 aa26.78■■□□□ 1.88
NFIX-203ENST00000397661 RBM27Q9P2N5 1060 aaKnown RBP26.78■■□□□ 1.88
NFIX-203ENST00000397661 CDC42BPGQ6DT37 1551 aa26.78■■□□□ 1.88
NFIX-203ENST00000397661 ANO2Q9NQ90 1003 aa26.78■■□□□ 1.88
NFIX-203ENST00000397661 PPP6R1Q9UPN7 881 aa26.77■■□□□ 1.88
NFIX-203ENST00000397661 RGS12O14924 1447 aa26.77■■□□□ 1.88
NFIX-203ENST00000397661 HAP1P54257 671 aaPredicted RBP26.76■■□□□ 1.88
NFIX-203ENST00000397661 ANXA1P04083 346 aa26.76■■□□□ 1.87
NFIX-203ENST00000397661 GNAI2P04899 355 aa26.76■■□□□ 1.87
NFIX-203ENST00000397661 MPNDQ8N594 471 aa26.76■■□□□ 1.87
NFIX-203ENST00000397661 LARP6Q9BRS8 491 aaKnown RBP26.76■■□□□ 1.87
NFIX-203ENST00000397661 ST18O60284 1047 aa26.76■■□□□ 1.87
NFIX-203ENST00000397661 FLIIQ13045 1269 aa26.76■■□□□ 1.87
NFIX-203ENST00000397661 UPF3BQ9BZI7 483 aaKnown RBP26.76■■□□□ 1.87
NFIX-203ENST00000397661 LRRFIP2Q9Y608 721 aaKnown RBP26.76■■□□□ 1.87
NFIX-203ENST00000397661 NUTM1Q86Y26 1132 aa26.75■■□□□ 1.87
NFIX-203ENST00000397661 PTPRCP08575 1304 aa26.75■■□□□ 1.87
NFIX-203ENST00000397661 KNDC1Q76NI1 1749 aa26.75■■□□□ 1.87
NFIX-203ENST00000397661 ZMYND15Q9H091 742 aa26.75■■□□□ 1.87
NFIX-203ENST00000397661 TMEM2Q9UHN6 1383 aa26.75■■□□□ 1.87
NFIX-203ENST00000397661 ERC2O15083 957 aa26.74■■□□□ 1.87
NFIX-203ENST00000397661 DLC1Q96QB1 1528 aa26.74■■□□□ 1.87
NFIX-203ENST00000397661 PKNOX2Q96KN3 472 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
NFIX-203ENST00000397661 RIMBP3CA6NJZ7 1639 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 RIMBP3BA6NNM3 1639 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 RIMBP3Q9UFD9 1639 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 REC8O95072 547 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 EID1Q9Y6B2 187 aa26.73■■□□□ 1.87
NFIX-203ENST00000397661 ABTB2Q8N961 1025 aa26.72■■□□□ 1.87
NFIX-203ENST00000397661 PALD1Q9ULE6 856 aa26.72■■□□□ 1.87
NFIX-203ENST00000397661 SKOR2Q2VWA4 1001 aaPredicted RBP26.72■■□□□ 1.87
NFIX-203ENST00000397661 UNC5CLQ8IV45 518 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms