RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 ST18O60284 1047 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 OTUD7AQ8TE49 926 aaPredicted RBP12.55□□□□□ -0.4
FGFR1-209ENST00000397113 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
FGFR1-209ENST00000397113 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
FGFR1-209ENST00000397113 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
FGFR1-209ENST00000397113 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
FGFR1-209ENST00000397113 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
FGFR1-209ENST00000397113 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
FGFR1-209ENST00000397113 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
FGFR1-209ENST00000397113 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
FGFR1-209ENST00000397113 ISY1Q9ULR0 285 aaKnown RBP12.54□□□□□ -0.4
FGFR1-209ENST00000397113 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
FGFR1-209ENST00000397113 AAMPQ13685 434 aa12.53□□□□□ -0.4
FGFR1-209ENST00000397113 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
FGFR1-209ENST00000397113 PTMSP20962 102 aa12.53□□□□□ -0.4
FGFR1-209ENST00000397113 NUCB2P80303 420 aa12.53□□□□□ -0.4
FGFR1-209ENST00000397113 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
FGFR1-209ENST00000397113 DIAPH1O60610 1272 aaKnown RBP12.52□□□□□ -0.4
FGFR1-209ENST00000397113 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.4
FGFR1-209ENST00000397113 NECTIN2Q92692 538 aa12.52□□□□□ -0.4
FGFR1-209ENST00000397113 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
FGFR1-209ENST00000397113 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
FGFR1-209ENST00000397113 ATP7BP35670 1465 aa12.52□□□□□ -0.41
FGFR1-209ENST00000397113 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
FGFR1-209ENST00000397113 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
FGFR1-209ENST00000397113 NSFL1CQ9UNZ2 370 aaKnown RBP12.52□□□□□ -0.41
FGFR1-209ENST00000397113 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
FGFR1-209ENST00000397113 SPC24Q8NBT2 197 aa12.51□□□□□ -0.41
FGFR1-209ENST00000397113 SNX21Q969T3 373 aa12.51□□□□□ -0.41
FGFR1-209ENST00000397113 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
FGFR1-209ENST00000397113 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
FGFR1-209ENST00000397113 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
FGFR1-209ENST00000397113 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
FGFR1-209ENST00000397113 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
FGFR1-209ENST00000397113 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 ALS2Q96Q42 1657 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
FGFR1-209ENST00000397113 RABEP1Q15276 862 aa12.49□□□□□ -0.41
FGFR1-209ENST00000397113 KIF2CQ99661 725 aa12.49□□□□□ -0.41
FGFR1-209ENST00000397113 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
FGFR1-209ENST00000397113 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
FGFR1-209ENST00000397113 NUTM2FA1L443 756 aa12.49□□□□□ -0.41
FGFR1-209ENST00000397113 AEBP2Q6ZN18 517 aaPredicted RBP12.49□□□□□ -0.41
FGFR1-209ENST00000397113 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 GPT2Q8TD30 523 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 CCDC39Q9UFE4 941 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 MED1Q15648 1581 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
FGFR1-209ENST00000397113 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
FGFR1-209ENST00000397113 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 DRC7Q8IY82 874 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 MAP4K4O95819 1239 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-209ENST00000397113 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
FGFR1-209ENST00000397113 PPP1R9BQ96SB3 815 aa12.47□□□□□ -0.41
FGFR1-209ENST00000397113 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
FGFR1-209ENST00000397113 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
FGFR1-209ENST00000397113 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
FGFR1-209ENST00000397113 FIBPO43427 364 aa12.46□□□□□ -0.42
FGFR1-209ENST00000397113 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.42
FGFR1-209ENST00000397113 TSPY26PQ9H489 355 aa12.46□□□□□ -0.42
FGFR1-209ENST00000397113 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
FGFR1-209ENST00000397113 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.42
FGFR1-209ENST00000397113 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.42
FGFR1-209ENST00000397113 EXOC6BQ9Y2D4 811 aa12.46□□□□□ -0.42
FGFR1-209ENST00000397113 SDSP20132 328 aa12.45□□□□□ -0.42
FGFR1-209ENST00000397113 ZBTB7BO15156 539 aaPredicted RBP12.45□□□□□ -0.42
FGFR1-209ENST00000397113 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
FGFR1-209ENST00000397113 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
FGFR1-209ENST00000397113 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
FGFR1-209ENST00000397113 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
FGFR1-209ENST00000397113 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 SASS6Q6UVJ0 657 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 NCOA3Q9Y6Q9 1424 aa12.44□□□□□ -0.42
FGFR1-209ENST00000397113 REC8O95072 547 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms