RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 NCBP3Q53F19 620 aaKnown RBP14.37□□□□□ -0.11
NUP98-205ENST00000397007 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
NUP98-205ENST00000397007 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
NUP98-205ENST00000397007 RBM6P78332 1123 aaKnown RBP14.37□□□□□ -0.11
NUP98-205ENST00000397007 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
NUP98-205ENST00000397007 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
NUP98-205ENST00000397007 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
NUP98-205ENST00000397007 KCPQ6ZWJ8 1503 aa14.35□□□□□ -0.11
NUP98-205ENST00000397007 AMPHP49418 695 aa14.35□□□□□ -0.11
NUP98-205ENST00000397007 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
NUP98-205ENST00000397007 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
NUP98-205ENST00000397007 AEBP1Q8IUX7 1158 aa14.34□□□□□ -0.11
NUP98-205ENST00000397007 TNNT2P45379 298 aaPredicted RBP14.32□□□□□ -0.12
NUP98-205ENST00000397007 FCHSD2O94868 740 aa14.31□□□□□ -0.12
NUP98-205ENST00000397007 MEX3CQ5U5Q3 659 aaKnown RBP14.3□□□□□ -0.12
NUP98-205ENST00000397007 SOX12O15370 315 aa14.3□□□□□ -0.12
NUP98-205ENST00000397007 IL2RBP14784 551 aa14.3□□□□□ -0.12
NUP98-205ENST00000397007 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
NUP98-205ENST00000397007 CASZ1Q86V15 1759 aa14.3□□□□□ -0.12
NUP98-205ENST00000397007 CYP27B1O15528 508 aa14.29□□□□□ -0.12
NUP98-205ENST00000397007 UBR3Q6ZT12 1888 aa14.29□□□□□ -0.12
NUP98-205ENST00000397007 N4BP2Q86UW6 1770 aaPredicted RBP14.29□□□□□ -0.12
NUP98-205ENST00000397007 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
NUP98-205ENST00000397007 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
NUP98-205ENST00000397007 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
NUP98-205ENST00000397007 ANP32CO43423 234 aa14.27□□□□□ -0.12
NUP98-205ENST00000397007 RXRBP28702 533 aa14.27□□□□□ -0.12
NUP98-205ENST00000397007 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.12
NUP98-205ENST00000397007 TOM1L2Q6ZVM7 507 aa14.27□□□□□ -0.13
NUP98-205ENST00000397007 MIER1Q8N108 512 aa14.27□□□□□ -0.13
NUP98-205ENST00000397007 STRN4Q9NRL3 753 aa14.27□□□□□ -0.13
NUP98-205ENST00000397007 BCORQ6W2J9 1755 aa14.26□□□□□ -0.13
NUP98-205ENST00000397007 C4AP0C0L4 1744 aa14.26□□□□□ -0.13
NUP98-205ENST00000397007 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
NUP98-205ENST00000397007 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
NUP98-205ENST00000397007 SEPT12Q8IYM1 358 aa14.26□□□□□ -0.13
NUP98-205ENST00000397007 ADAMTS8Q9UP79 889 aa14.26□□□□□ -0.13
NUP98-205ENST00000397007 HEG1Q9ULI3 1381 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 PHKG2P15735 406 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 FAM98CQ17RN3 349 aaKnown RBP14.25□□□□□ -0.13
NUP98-205ENST00000397007 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
NUP98-205ENST00000397007 ILDR2Q71H61 639 aa14.24□□□□□ -0.13
NUP98-205ENST00000397007 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
NUP98-205ENST00000397007 EVA1CP58658 441 aa14.23□□□□□ -0.13
NUP98-205ENST00000397007 CCDC27Q2M243 656 aa14.23□□□□□ -0.13
NUP98-205ENST00000397007 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
NUP98-205ENST00000397007 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
NUP98-205ENST00000397007 MYH14Q7Z406 1995 aaKnown RBP14.23□□□□□ -0.13
NUP98-205ENST00000397007 NLRP2Q9NX02 1062 aa14.22□□□□□ -0.13
NUP98-205ENST00000397007 TRIM35Q9UPQ4 493 aa14.22□□□□□ -0.13
NUP98-205ENST00000397007 HTATSF1O43719 755 aaKnown RBP14.22□□□□□ -0.13
NUP98-205ENST00000397007 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
NUP98-205ENST00000397007 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
NUP98-205ENST00000397007 AKAP4Q5JQC9 854 aa14.2□□□□□ -0.14
NUP98-205ENST00000397007 LTV1Q96GA3 475 aaPredicted RBP14.2□□□□□ -0.14
NUP98-205ENST00000397007 PRKAR2BP31323 418 aa14.2□□□□□ -0.14
NUP98-205ENST00000397007 SCN7AQ01118 1682 aa14.2□□□□□ -0.14
NUP98-205ENST00000397007 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
NUP98-205ENST00000397007 PLEKHG5O94827 1062 aa14.19□□□□□ -0.14
NUP98-205ENST00000397007 HMOX1P09601 288 aa14.19□□□□□ -0.14
NUP98-205ENST00000397007 TATP17735 454 aaPredicted RBP14.19□□□□□ -0.14
NUP98-205ENST00000397007 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
NUP98-205ENST00000397007 DDB1Q16531 1140 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 KRT27Q7Z3Y8 459 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 NUDCQ9Y266 331 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 ZNF853P0CG23 659 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 IL17REQ8NFR9 667 aa14.18□□□□□ -0.14
NUP98-205ENST00000397007 CSB-PGBD3P0DP91 1061 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 SPG7Q9UQ90 795 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 TMPOP42166 694 aaKnown RBP14.16□□□□□ -0.14
NUP98-205ENST00000397007 ANKRD36CQ5JPF3 1778 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 ZBTB7CA1YPR0 619 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 PTF1AQ7RTS3 328 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 IFNL2Q8IZJ0 200 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 NRXN2Q9P2S2 1712 aa14.16□□□□□ -0.14
NUP98-205ENST00000397007 EXOC5O00471 708 aa14.15□□□□□ -0.14
NUP98-205ENST00000397007 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
NUP98-205ENST00000397007 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
NUP98-205ENST00000397007 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
NUP98-205ENST00000397007 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
NUP98-205ENST00000397007 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.141e-7■■□□□ 11.9
NUP98-205ENST00000397007 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
NUP98-205ENST00000397007 MRS2Q9HD23 443 aa14.15□□□□□ -0.14
NUP98-205ENST00000397007 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
NUP98-205ENST00000397007 GAS2L2Q8NHY3 880 aa14.14□□□□□ -0.15
NUP98-205ENST00000397007 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
NUP98-205ENST00000397007 KIF13BQ9NQT8 1826 aa14.13□□□□□ -0.15
NUP98-205ENST00000397007 FAM196AQ6ZSG2 479 aa14.13□□□□□ -0.15
NUP98-205ENST00000397007 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
NUP98-205ENST00000397007 LGR6Q9HBX8 967 aa14.12□□□□□ -0.15
NUP98-205ENST00000397007 NGEFQ8N5V2 710 aa14.12□□□□□ -0.15
NUP98-205ENST00000397007 PNNQ9H307 717 aaKnown RBP14.12□□□□□ -0.15
NUP98-205ENST00000397007 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
NUP98-205ENST00000397007 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
NUP98-205ENST00000397007 GNAT3A8MTJ3 354 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms