RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
CYTH3-202ENST00000396741 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
CYTH3-202ENST00000396741 CYP46A1Q9Y6A2 500 aa17.74■□□□□ 0.43
CYTH3-202ENST00000396741 SPATA31E1Q6ZUB1 1445 aa17.74■□□□□ 0.43
CYTH3-202ENST00000396741 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
CYTH3-202ENST00000396741 SASS6Q6UVJ0 657 aa17.74■□□□□ 0.43
CYTH3-202ENST00000396741 NUP160Q12769 1436 aa17.74■□□□□ 0.43
CYTH3-202ENST00000396741 PSMA5P28066 241 aa17.74■□□□□ 0.43
CYTH3-202ENST00000396741 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
CYTH3-202ENST00000396741 MBD3O95983 291 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 SDF4Q9BRK5 362 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 TRIM29Q14134 588 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
CYTH3-202ENST00000396741 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
CYTH3-202ENST00000396741 CCDC34Q96HJ3 373 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
CYTH3-202ENST00000396741 MTMR7Q9Y216 660 aa17.73■□□□□ 0.43
CYTH3-202ENST00000396741 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
CYTH3-202ENST00000396741 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
CYTH3-202ENST00000396741 CLSTN1O94985 981 aa17.72■□□□□ 0.43
CYTH3-202ENST00000396741 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
CYTH3-202ENST00000396741 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
CYTH3-202ENST00000396741 G3V3G9 751 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 BMP2KLQ5H9B9 411 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 A0A1W2PP64 1363 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 NSD2O96028 1365 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 RAD21O60216 631 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 GDPD2Q9HCC8 539 aa17.71■□□□□ 0.43
CYTH3-202ENST00000396741 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
CYTH3-202ENST00000396741 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 EIF4A2Q14240 407 aaKnown RBP17.7■□□□□ 0.42
CYTH3-202ENST00000396741 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 SPG7Q9UQ90 795 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 ARHGEF12Q9NZN5 1544 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
CYTH3-202ENST00000396741 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
CYTH3-202ENST00000396741 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
CYTH3-202ENST00000396741 SPC24Q8NBT2 197 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 VAMP4O75379 141 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 KIF1BPQ96EK5 621 aa17.7■□□□□ 0.42
CYTH3-202ENST00000396741 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
CYTH3-202ENST00000396741 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
CYTH3-202ENST00000396741 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 SYCE3A1L190 88 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 NUCB1Q02818 461 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 HDAC1Q13547 482 aaPredicted RBP17.69■□□□□ 0.42
CYTH3-202ENST00000396741 PRPF40BQ6NWY9 871 aaKnown RBP17.69■□□□□ 0.42
CYTH3-202ENST00000396741 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
CYTH3-202ENST00000396741 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
CYTH3-202ENST00000396741 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
CYTH3-202ENST00000396741 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
CYTH3-202ENST00000396741 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
CYTH3-202ENST00000396741 CCDC83Q8IWF9 413 aa17.68■□□□□ 0.42
CYTH3-202ENST00000396741 IL16Q14005 1332 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
CYTH3-202ENST00000396741 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 MRPL50Q8N5N7 158 aaKnown RBP17.67■□□□□ 0.42
CYTH3-202ENST00000396741 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 ADGRL2O95490 1459 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
CYTH3-202ENST00000396741 MARCH6O60337 910 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 SDSP20132 328 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 MYD88Q99836 296 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 PDCP20941 246 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 ABCC10Q5T3U5 1492 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 KCNH5Q8NCM2 988 aa17.66■□□□□ 0.42
CYTH3-202ENST00000396741 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 ZBTB40Q9NUA8 1239 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 RNF123Q5XPI4 1314 aa17.65■□□□□ 0.42
CYTH3-202ENST00000396741 TMX4Q9H1E5 349 aaPredicted RBP17.64■□□□□ 0.42
CYTH3-202ENST00000396741 ESPNB1AK53 854 aa17.64■□□□□ 0.41
CYTH3-202ENST00000396741 HIP1O00291 1037 aa17.64■□□□□ 0.41
CYTH3-202ENST00000396741 PIP4K2AP48426 406 aaPredicted RBP17.64■□□□□ 0.41
CYTH3-202ENST00000396741 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
CYTH3-202ENST00000396741 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
CYTH3-202ENST00000396741 GLRX3O76003 335 aaKnown RBP17.64■□□□□ 0.41
CYTH3-202ENST00000396741 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
CYTH3-202ENST00000396741 TTC22Q5TAA0 569 aa17.64■□□□□ 0.41
CYTH3-202ENST00000396741 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.41
CYTH3-202ENST00000396741 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
CYTH3-202ENST00000396741 ERICH2A1L162 156 aa17.63■□□□□ 0.41
CYTH3-202ENST00000396741 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
CYTH3-202ENST00000396741 LRRIQ1Q96JM4 1722 aa17.63■□□□□ 0.41
CYTH3-202ENST00000396741 RBM10P98175 930 aaKnown RBP17.62■□□□□ 0.41
CYTH3-202ENST00000396741 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
CYTH3-202ENST00000396741 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms