RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 IL13P35225 146 aa17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 DDX11L8A8MPP1 907 aa17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 FSD2A1L4K1 749 aa17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-203ENST00000396268 VAMP4O75379 141 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 BMP2KLQ5H9B9 411 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 CLCN1P35523 988 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 NLRP6P59044 892 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
CCHCR1-203ENST00000396268 ANKARQ7Z5J8 1434 aa17.46■□□□□ 0.39
CCHCR1-203ENST00000396268 MRPL50Q8N5N7 158 aaKnown RBP17.46■□□□□ 0.39
CCHCR1-203ENST00000396268 GRPEL1Q9HAV7 217 aa17.46■□□□□ 0.39
CCHCR1-203ENST00000396268 FOXO3O43524 673 aa17.46■□□□□ 0.38
CCHCR1-203ENST00000396268 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.38
CCHCR1-203ENST00000396268 ZNF428Q96B54 188 aa17.46■□□□□ 0.38
CCHCR1-203ENST00000396268 GCC1Q96CN9 775 aa17.46■□□□□ 0.38
CCHCR1-203ENST00000396268 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 STRCP1A6NGW2 1772 aa17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 CHMP4BQ9H444 224 aaKnown RBP17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 SNX21Q969T3 373 aa17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 LRRC7Q96NW7 1537 aa17.45■□□□□ 0.38
CCHCR1-203ENST00000396268 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 GNAI1P63096 354 aa17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 DDX17Q92841 729 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 ESPNB1AK53 854 aa17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 MBIPQ9NS73 344 aa17.44■□□□□ 0.38
CCHCR1-203ENST00000396268 TBC1D9Q6ZT07 1266 aa17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 CDK12Q9NYV4 1490 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 GAS2L3Q86XJ1 694 aa17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 MRE11P49959 708 aa17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-203ENST00000396268 TTC21AQ8NDW8 1320 aa17.42■□□□□ 0.38
CCHCR1-203ENST00000396268 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-203ENST00000396268 PSME1Q06323 249 aa17.42■□□□□ 0.38
CCHCR1-203ENST00000396268 GBP4Q96PP9 640 aa17.42■□□□□ 0.38
CCHCR1-203ENST00000396268 LMTK3Q96Q04 1460 aa17.42■□□□□ 0.38
CCHCR1-203ENST00000396268 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 NWD1Q149M9 1564 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 ARID3AQ99856 593 aa17.41■□□□□ 0.38
CCHCR1-203ENST00000396268 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
CCHCR1-203ENST00000396268 KIF2CQ99661 725 aa17.4■□□□□ 0.38
CCHCR1-203ENST00000396268 DDIT3P35638 169 aa17.4■□□□□ 0.38
CCHCR1-203ENST00000396268 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
CCHCR1-203ENST00000396268 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
CCHCR1-203ENST00000396268 SULT6B1Q6IMI4 303 aa17.39■□□□□ 0.37
CCHCR1-203ENST00000396268 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.37
CCHCR1-203ENST00000396268 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
CCHCR1-203ENST00000396268 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
CCHCR1-203ENST00000396268 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
CCHCR1-203ENST00000396268 K7ELQ4 463 aaPredicted RBP17.38■□□□□ 0.37
CCHCR1-203ENST00000396268 ZBTB7CA1YPR0 619 aa17.38■□□□□ 0.37
CCHCR1-203ENST00000396268 RAB3GAP1Q15042 981 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 ABCC4O15439 1325 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 CDC45O75419 566 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 AMPHP49418 695 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
CCHCR1-203ENST00000396268 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
CCHCR1-203ENST00000396268 RRP9O43818 475 aaKnown RBP17.36■□□□□ 0.37
CCHCR1-203ENST00000396268 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
CCHCR1-203ENST00000396268 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
CCHCR1-203ENST00000396268 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
CCHCR1-203ENST00000396268 ZNF335Q9H4Z2 1342 aaPredicted RBP17.35■□□□□ 0.37
CCHCR1-203ENST00000396268 APBB1O00213 710 aa17.35■□□□□ 0.37
CCHCR1-203ENST00000396268 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
CCHCR1-203ENST00000396268 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
CCHCR1-203ENST00000396268 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-203ENST00000396268 SSFA2P28290 1259 aa17.34■□□□□ 0.37
CCHCR1-203ENST00000396268 GAS2L2Q8NHY3 880 aa17.34■□□□□ 0.37
CCHCR1-203ENST00000396268 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.37
CCHCR1-203ENST00000396268 ATF3P18847 181 aa17.33■□□□□ 0.36
CCHCR1-203ENST00000396268 SKOR2Q2VWA4 1001 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-203ENST00000396268 PLEKHM2Q8IWE5 1019 aa17.32■□□□□ 0.36
CCHCR1-203ENST00000396268 GOLGA6L22H0YM25 854 aa17.32■□□□□ 0.36
CCHCR1-203ENST00000396268 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-203ENST00000396268 HOXC9P31274 260 aa17.32■□□□□ 0.36
CCHCR1-203ENST00000396268 KRT24Q2M2I5 525 aa17.32■□□□□ 0.36
CCHCR1-203ENST00000396268 SBNO1A3KN83 1393 aa17.31■□□□□ 0.36
CCHCR1-203ENST00000396268 EYA1Q99502 592 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms