RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
CTNNB1-202ENST00000396183 USP6P35125 1406 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 ATP7BP35670 1465 aa17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 OS9Q13438 667 aaPredicted RBP17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 PHAXQ9H814 394 aaKnown RBP17.37■□□□□ 0.37
CTNNB1-202ENST00000396183 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
CTNNB1-202ENST00000396183 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
CTNNB1-202ENST00000396183 TBC1D2Q9BYX2 928 aa17.36■□□□□ 0.37
CTNNB1-202ENST00000396183 CHL1O00533 1208 aa17.35■□□□□ 0.37
CTNNB1-202ENST00000396183 HSCBQ8IWL3 235 aa17.35■□□□□ 0.37
CTNNB1-202ENST00000396183 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
CTNNB1-202ENST00000396183 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
CTNNB1-202ENST00000396183 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
CTNNB1-202ENST00000396183 ATF3P18847 181 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 SPATA31D1Q6ZQQ2 1576 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 AGLP35573 1532 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 NUCB1Q02818 461 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 FLT4P35916 1363 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 COL3A1P02461 1466 aaPredicted RBP17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 SLC39A6Q13433 755 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
CTNNB1-202ENST00000396183 ZNF853P0CG23 659 aa17.33■□□□□ 0.37
CTNNB1-202ENST00000396183 USP19O94966 1318 aa17.33■□□□□ 0.36
CTNNB1-202ENST00000396183 FLIIQ13045 1269 aa17.33■□□□□ 0.36
CTNNB1-202ENST00000396183 GCP02774 474 aa17.32■□□□□ 0.36
CTNNB1-202ENST00000396183 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
CTNNB1-202ENST00000396183 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
CTNNB1-202ENST00000396183 MYL6BP14649 208 aa17.32■□□□□ 0.36
CTNNB1-202ENST00000396183 FOXD4L6Q3SYB3 417 aaPredicted RBP17.31■□□□□ 0.36
CTNNB1-202ENST00000396183 FOXD4L3Q6VB84 417 aaPredicted RBP17.31■□□□□ 0.36
CTNNB1-202ENST00000396183 TBC1D32Q96NH3 1257 aa17.31■□□□□ 0.36
CTNNB1-202ENST00000396183 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
CTNNB1-202ENST00000396183 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
CTNNB1-202ENST00000396183 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 MSH6P52701 1360 aa17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 TBC1D9Q6ZT07 1266 aa17.3■□□□□ 0.36
CTNNB1-202ENST00000396183 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
CTNNB1-202ENST00000396183 ANKRD24Q8TF21 1146 aa17.29■□□□□ 0.36
CTNNB1-202ENST00000396183 AAMPQ13685 434 aa17.29■□□□□ 0.36
CTNNB1-202ENST00000396183 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
CTNNB1-202ENST00000396183 DTNBO60941 627 aa17.28■□□□□ 0.36
CTNNB1-202ENST00000396183 GCC1Q96CN9 775 aa17.28■□□□□ 0.36
CTNNB1-202ENST00000396183 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
CTNNB1-202ENST00000396183 SURF6O75683 361 aaKnown RBP17.27■□□□□ 0.36
CTNNB1-202ENST00000396183 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
CTNNB1-202ENST00000396183 AXIN2Q9Y2T1 843 aa17.27■□□□□ 0.36
CTNNB1-202ENST00000396183 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
CTNNB1-202ENST00000396183 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
CTNNB1-202ENST00000396183 SBNO1A3KN83 1393 aa17.27■□□□□ 0.35
CTNNB1-202ENST00000396183 UBTFL1P0CB47 393 aaPredicted RBP17.27■□□□□ 0.35
CTNNB1-202ENST00000396183 CEP85Q6P2H3 762 aa17.27■□□□□ 0.35
CTNNB1-202ENST00000396183 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.35
CTNNB1-202ENST00000396183 HMMRO75330 724 aa17.26■□□□□ 0.35
CTNNB1-202ENST00000396183 GNAI2P04899 355 aa17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 SIL1Q9H173 461 aa17.25■□□□□ 0.35
CTNNB1-202ENST00000396183 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
CTNNB1-202ENST00000396183 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
CTNNB1-202ENST00000396183 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
CTNNB1-202ENST00000396183 ABCC4O15439 1325 aa17.24■□□□□ 0.35
CTNNB1-202ENST00000396183 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 GSE1Q14687 1217 aa17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 BRPF3Q9ULD4 1205 aa17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
CTNNB1-202ENST00000396183 IP6K1Q92551 441 aa17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 DLC1Q96QB1 1528 aa17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 LARP6Q9BRS8 491 aaKnown RBP17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 ANO2Q9NQ90 1003 aa17.22■□□□□ 0.35
CTNNB1-202ENST00000396183 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
CTNNB1-202ENST00000396183 MED14O60244 1454 aa17.21■□□□□ 0.35
CTNNB1-202ENST00000396183 CDC45O75419 566 aa17.21■□□□□ 0.35
CTNNB1-202ENST00000396183 SDSP20132 328 aa17.21■□□□□ 0.35
CTNNB1-202ENST00000396183 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
CTNNB1-202ENST00000396183 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 PROSER3Q2NL68 480 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
CTNNB1-202ENST00000396183 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms