RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 PLEKHG5O94827 1062 aa17.38■□□□□ 0.37
CLIC1-209ENST00000395892 USHBP1Q8N6Y0 703 aa17.38■□□□□ 0.37
CLIC1-209ENST00000395892 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
CLIC1-209ENST00000395892 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
CLIC1-209ENST00000395892 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
CLIC1-209ENST00000395892 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
CLIC1-209ENST00000395892 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
CLIC1-209ENST00000395892 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
CLIC1-209ENST00000395892 VAMP4O75379 141 aa17.36■□□□□ 0.37
CLIC1-209ENST00000395892 PDE3AQ14432 1141 aa17.36■□□□□ 0.37
CLIC1-209ENST00000395892 MCM10Q7L590 875 aa17.36■□□□□ 0.37
CLIC1-209ENST00000395892 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
CLIC1-209ENST00000395892 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
CLIC1-209ENST00000395892 CAMTA1Q9Y6Y1 1673 aa17.36■□□□□ 0.37
CLIC1-209ENST00000395892 CPDO75976 1380 aa17.35■□□□□ 0.37
CLIC1-209ENST00000395892 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
CLIC1-209ENST00000395892 LMO7Q8WWI1 1683 aa17.34■□□□□ 0.37
CLIC1-209ENST00000395892 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
CLIC1-209ENST00000395892 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
CLIC1-209ENST00000395892 ABCC6O95255 1503 aa17.32■□□□□ 0.36
CLIC1-209ENST00000395892 BRPF1P55201 1214 aaPredicted RBP17.32■□□□□ 0.36
CLIC1-209ENST00000395892 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
CLIC1-209ENST00000395892 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
CLIC1-209ENST00000395892 TNNQ9UQP3 1299 aa17.32■□□□□ 0.36
CLIC1-209ENST00000395892 ERBB3P21860 1342 aa17.31■□□□□ 0.36
CLIC1-209ENST00000395892 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
CLIC1-209ENST00000395892 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
CLIC1-209ENST00000395892 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
CLIC1-209ENST00000395892 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
CLIC1-209ENST00000395892 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
CLIC1-209ENST00000395892 RLBP1P12271 317 aa17.29■□□□□ 0.36
CLIC1-209ENST00000395892 CHRNA2Q15822 529 aa17.29■□□□□ 0.36
CLIC1-209ENST00000395892 PANK1Q8TE04 598 aa17.29■□□□□ 0.36
CLIC1-209ENST00000395892 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
CLIC1-209ENST00000395892 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
CLIC1-209ENST00000395892 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
CLIC1-209ENST00000395892 SLC4A2P04920 1241 aa17.28■□□□□ 0.36
CLIC1-209ENST00000395892 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
CLIC1-209ENST00000395892 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
CLIC1-209ENST00000395892 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
CLIC1-209ENST00000395892 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
CLIC1-209ENST00000395892 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.36
CLIC1-209ENST00000395892 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
CLIC1-209ENST00000395892 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
CLIC1-209ENST00000395892 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
CLIC1-209ENST00000395892 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
CLIC1-209ENST00000395892 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
CLIC1-209ENST00000395892 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
CLIC1-209ENST00000395892 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
CLIC1-209ENST00000395892 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
CLIC1-209ENST00000395892 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
CLIC1-209ENST00000395892 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
CLIC1-209ENST00000395892 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
CLIC1-209ENST00000395892 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
CLIC1-209ENST00000395892 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
CLIC1-209ENST00000395892 ROBO1Q9Y6N7 1651 aa17.24■□□□□ 0.35
CLIC1-209ENST00000395892 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
CLIC1-209ENST00000395892 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
CLIC1-209ENST00000395892 TRIM27P14373 513 aa17.23■□□□□ 0.35
CLIC1-209ENST00000395892 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
CLIC1-209ENST00000395892 CANXP27824 592 aaKnown RBP17.22■□□□□ 0.35
CLIC1-209ENST00000395892 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
CLIC1-209ENST00000395892 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
CLIC1-209ENST00000395892 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
CLIC1-209ENST00000395892 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
CLIC1-209ENST00000395892 ARHGAP45Q92619 1136 aa17.22■□□□□ 0.35
CLIC1-209ENST00000395892 TSPYL4Q9UJ04 414 aa17.22■□□□□ 0.35
CLIC1-209ENST00000395892 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CLIC1-209ENST00000395892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLIC1-209ENST00000395892 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
CLIC1-209ENST00000395892 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
CLIC1-209ENST00000395892 CAPN15O75808 1086 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 MS4A1P11836 297 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 PRDM11Q9NQV5 511 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 KIF16BQ96L93 1317 aa17.2■□□□□ 0.34
CLIC1-209ENST00000395892 AAMPQ13685 434 aa17.19■□□□□ 0.34
CLIC1-209ENST00000395892 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
CLIC1-209ENST00000395892 MEGF6O75095 1541 aa17.18■□□□□ 0.34
CLIC1-209ENST00000395892 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
CLIC1-209ENST00000395892 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
CLIC1-209ENST00000395892 TATP17735 454 aaPredicted RBP17.18■□□□□ 0.34
CLIC1-209ENST00000395892 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
CLIC1-209ENST00000395892 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
CLIC1-209ENST00000395892 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
CLIC1-209ENST00000395892 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
CLIC1-209ENST00000395892 OVOS2A0A0G2JMS6 1433 aa17.17■□□□□ 0.34
CLIC1-209ENST00000395892 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
CLIC1-209ENST00000395892 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
CLIC1-209ENST00000395892 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
CLIC1-209ENST00000395892 TMEM57Q8N5G2 664 aa17.16■□□□□ 0.34
CLIC1-209ENST00000395892 IGHDP01880 384 aa17.15■□□□□ 0.34
CLIC1-209ENST00000395892 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
CLIC1-209ENST00000395892 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
CLIC1-209ENST00000395892 CARD10Q9BWT7 1032 aa17.15■□□□□ 0.34
CLIC1-209ENST00000395892 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
CLIC1-209ENST00000395892 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
CLIC1-209ENST00000395892 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms