RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
UBFD1-201ENST00000395878 SYCP1Q15431 976 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 ALDH1L2Q3SY69 923 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 CEP57L1Q8IYX8 460 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
UBFD1-201ENST00000395878 NUP62CLQ9H1M0 184 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 TXLNBQ8N3L3 684 aa20.48■□□□□ 0.87
UBFD1-201ENST00000395878 ANKLE2Q86XL3 938 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 CCDC112Q8NEF3 446 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 HMGXB3Q12766 1538 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 CCDC66A2RUB6 948 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
UBFD1-201ENST00000395878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■■■ 178.4
UBFD1-201ENST00000395878 KIF1BPQ96EK5 621 aa20.46■□□□□ 0.87
UBFD1-201ENST00000395878 RAB11FIP3O75154 756 aa20.46■□□□□ 0.87
UBFD1-201ENST00000395878 RAPGEF3O95398 923 aa20.45■□□□□ 0.87
UBFD1-201ENST00000395878 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
UBFD1-201ENST00000395878 CDK13Q14004 1512 aaKnown RBP20.45■□□□□ 0.86
UBFD1-201ENST00000395878 WASF1Q92558 559 aa20.45■□□□□ 0.86
UBFD1-201ENST00000395878 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
UBFD1-201ENST00000395878 DUSP27Q5VZP5 1158 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 H0YHG0 523 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 PRDM11Q9NQV5 511 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 RARSP54136 660 aaKnown RBP20.44■□□□□ 0.86
UBFD1-201ENST00000395878 KCNH5Q8NCM2 988 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 GLRX3O76003 335 aaKnown RBP20.44■□□□□ 0.86
UBFD1-201ENST00000395878 MX1P20591 662 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 TDO2P48775 406 aa20.44■□□□□ 0.86
UBFD1-201ENST00000395878 EXOC6BQ9Y2D4 811 aa20.43■□□□□ 0.86
UBFD1-201ENST00000395878 ATP2B2Q01814 1243 aa20.43■□□□□ 0.86
UBFD1-201ENST00000395878 DEF6Q9H4E7 631 aa20.43■□□□□ 0.86
UBFD1-201ENST00000395878 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
UBFD1-201ENST00000395878 POGZQ7Z3K3 1410 aa20.42■□□□□ 0.86
UBFD1-201ENST00000395878 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
UBFD1-201ENST00000395878 NUTM1Q86Y26 1132 aa20.42■□□□□ 0.86
UBFD1-201ENST00000395878 STK11IPQ8N1F8 1099 aa20.42■□□□□ 0.86
UBFD1-201ENST00000395878 ERLIN2O94905 339 aa20.42■□□□□ 0.86
UBFD1-201ENST00000395878 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
UBFD1-201ENST00000395878 TMEM132AQ24JP5 1023 aa20.41■□□□□ 0.86
UBFD1-201ENST00000395878 AXDND1Q5T1B0 1012 aaPredicted RBP20.41■□□□□ 0.86
UBFD1-201ENST00000395878 UPF3BQ9BZI7 483 aaKnown RBP20.41■□□□□ 0.86
UBFD1-201ENST00000395878 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
UBFD1-201ENST00000395878 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
UBFD1-201ENST00000395878 LEKR1Q6ZMV7 388 aa20.41■□□□□ 0.86
UBFD1-201ENST00000395878 ERLIN1O75477 346 aa20.4■□□□□ 0.86
UBFD1-201ENST00000395878 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
UBFD1-201ENST00000395878 MAP3K11Q16584 847 aa20.4■□□□□ 0.86
UBFD1-201ENST00000395878 ESPNB1AK53 854 aa20.39■□□□□ 0.86
UBFD1-201ENST00000395878 CCDC181Q5TID7 509 aa20.39■□□□□ 0.86
UBFD1-201ENST00000395878 TANGO6Q9C0B7 1094 aa20.39■□□□□ 0.86
UBFD1-201ENST00000395878 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.86
UBFD1-201ENST00000395878 RAI14Q9P0K7 980 aa20.39■□□□□ 0.85
UBFD1-201ENST00000395878 MAGI1Q96QZ7 1491 aaPredicted RBP20.39■□□□□ 0.85
UBFD1-201ENST00000395878 MCM10Q7L590 875 aa20.39■□□□□ 0.85
UBFD1-201ENST00000395878 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
UBFD1-201ENST00000395878 WWC2Q6AWC2 1192 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 LARP1Q6PKG0 1096 aaKnown RBP20.38■□□□□ 0.85
UBFD1-201ENST00000395878 PKNOX2Q96KN3 472 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 RBM10P98175 930 aaKnown RBP20.38■□□□□ 0.85
UBFD1-201ENST00000395878 ZHX3Q9H4I2 956 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 U3KPZ7 1027 aaPredicted RBP20.38■□□□□ 0.85
UBFD1-201ENST00000395878 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
UBFD1-201ENST00000395878 MPNDQ8N594 471 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 LRP2BPQ9P2M1 347 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 AKAP2Q9Y2D5 859 aa20.38■□□□□ 0.85
UBFD1-201ENST00000395878 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
UBFD1-201ENST00000395878 CEP131Q9UPN4 1083 aa20.37■□□□□ 0.85
UBFD1-201ENST00000395878 GOLGA6L10A6NI86 522 aa20.37■□□□□ 0.85
UBFD1-201ENST00000395878 IDH1O75874 414 aaKnown RBP20.37■□□□□ 0.85
UBFD1-201ENST00000395878 STARD3NLO95772 234 aa20.36■□□□□ 0.85
UBFD1-201ENST00000395878 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
UBFD1-201ENST00000395878 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
UBFD1-201ENST00000395878 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
UBFD1-201ENST00000395878 PCF11O94913 1555 aaKnown RBP20.36■□□□□ 0.85
UBFD1-201ENST00000395878 IQGAP2Q13576 1575 aa20.36■□□□□ 0.85
UBFD1-201ENST00000395878 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
UBFD1-201ENST00000395878 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
UBFD1-201ENST00000395878 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 EIF3JO75822 258 aaKnown RBP20.35■□□□□ 0.85
UBFD1-201ENST00000395878 FILIP1Q7Z7B0 1213 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 ABCC5O15440 1437 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 SKIDA1Q1XH10 827 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 IQCEQ6IPM2 695 aa20.35■□□□□ 0.85
UBFD1-201ENST00000395878 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
UBFD1-201ENST00000395878 SYCE3A1L190 88 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
UBFD1-201ENST00000395878 UQCRHLA0A096LP55 91 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 UQCRHP07919 91 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 TSPYL1Q9H0U9 437 aa20.34■□□□□ 0.85
UBFD1-201ENST00000395878 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms