RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
SCAF11-204ENST00000395454 VPS72Q15906 364 aa19.74■□□□□ 0.75
SCAF11-204ENST00000395454 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
SCAF11-204ENST00000395454 PLEKHF1Q96S99 279 aa19.74■□□□□ 0.75
SCAF11-204ENST00000395454 TRPC5Q9UL62 973 aaPredicted RBP19.74■□□□□ 0.75
SCAF11-204ENST00000395454 ZNF772Q68DY9 489 aaPredicted RBP19.73■□□□□ 0.75
SCAF11-204ENST00000395454 SPATA31A1Q5TZJ5 1347 aa19.73■□□□□ 0.75
SCAF11-204ENST00000395454 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
SCAF11-204ENST00000395454 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
SCAF11-204ENST00000395454 QTRT2Q9H974 415 aaKnown RBP19.72■□□□□ 0.75
SCAF11-204ENST00000395454 KDRP35968 1356 aa19.71■□□□□ 0.75
SCAF11-204ENST00000395454 WDR63Q8IWG1 891 aa19.71■□□□□ 0.75
SCAF11-204ENST00000395454 SPINK5Q9NQ38 1064 aaPredicted RBP19.71■□□□□ 0.75
SCAF11-204ENST00000395454 NCAPD2Q15021 1401 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 ATRNO75882 1429 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 FCHSD2O94868 740 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
SCAF11-204ENST00000395454 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
SCAF11-204ENST00000395454 THRAP3Q9Y2W1 955 aaKnown RBP19.68■□□□□ 0.74
SCAF11-204ENST00000395454 IL2RBP14784 551 aa19.68■□□□□ 0.74
SCAF11-204ENST00000395454 FAM98CQ17RN3 349 aaKnown RBP19.67■□□□□ 0.74
SCAF11-204ENST00000395454 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
SCAF11-204ENST00000395454 RGS17Q9UGC6 210 aaPredicted RBP19.67■□□□□ 0.74
SCAF11-204ENST00000395454 MEGF6O75095 1541 aa19.67■□□□□ 0.74
SCAF11-204ENST00000395454 NEFMP07197 916 aa19.66■□□□□ 0.74
SCAF11-204ENST00000395454 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
SCAF11-204ENST00000395454 MAPK8IP3Q9UPT6 1336 aa19.66■□□□□ 0.74
SCAF11-204ENST00000395454 A0A0G2JS52 829 aa19.65■□□□□ 0.74
SCAF11-204ENST00000395454 MYT1Q01538 1121 aa19.65■□□□□ 0.74
SCAF11-204ENST00000395454 GLI3P10071 1580 aa19.65■□□□□ 0.74
SCAF11-204ENST00000395454 BARGINQ6ZT62 677 aa19.64■□□□□ 0.74
SCAF11-204ENST00000395454 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
SCAF11-204ENST00000395454 WNK3Q9BYP7 1800 aa19.63■□□□□ 0.73
SCAF11-204ENST00000395454 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
SCAF11-204ENST00000395454 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
SCAF11-204ENST00000395454 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
SCAF11-204ENST00000395454 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
SCAF11-204ENST00000395454 CDCA7Q9BWT1 371 aaPredicted RBP19.62■□□□□ 0.73
SCAF11-204ENST00000395454 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
SCAF11-204ENST00000395454 OVOS2A0A0G2JMS6 1433 aa19.62■□□□□ 0.73
SCAF11-204ENST00000395454 POTEAQ6S8J7 498 aa19.61■□□□□ 0.73
SCAF11-204ENST00000395454 IL16Q14005 1332 aa19.61■□□□□ 0.73
SCAF11-204ENST00000395454 EP400Q96L91 3159 aa19.61■□□□□ 0.73
SCAF11-204ENST00000395454 B4GALNT3Q6L9W6 998 aa19.61■□□□□ 0.73
SCAF11-204ENST00000395454 RXRBP28702 533 aa19.6■□□□□ 0.73
SCAF11-204ENST00000395454 AMOTQ4VCS5 1084 aa19.6■□□□□ 0.73
SCAF11-204ENST00000395454 PLEKHO1Q53GL0 409 aaPredicted RBP19.6■□□□□ 0.73
SCAF11-204ENST00000395454 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
SCAF11-204ENST00000395454 DDB1Q16531 1140 aa19.59■□□□□ 0.73
SCAF11-204ENST00000395454 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
SCAF11-204ENST00000395454 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
SCAF11-204ENST00000395454 ZCRB1Q8TBF4 217 aaKnown RBP19.59■□□□□ 0.73
SCAF11-204ENST00000395454 EXOC5O00471 708 aa19.58■□□□□ 0.72
SCAF11-204ENST00000395454 NEUROD2Q15784 382 aa19.58■□□□□ 0.72
SCAF11-204ENST00000395454 GAS2L2Q8NHY3 880 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 EXOC6Q8TAG9 804 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.57■□□□□ 0.726e-11■■■■□ 26.7
SCAF11-204ENST00000395454 PKD1L3Q7Z443 1732 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 PLEKHG2Q9H7P9 1386 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-204ENST00000395454 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-204ENST00000395454 SEPT12Q8IYM1 358 aa19.57■□□□□ 0.72
SCAF11-204ENST00000395454 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
SCAF11-204ENST00000395454 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
SCAF11-204ENST00000395454 THSD7AQ9UPZ6 1657 aa19.56■□□□□ 0.72
SCAF11-204ENST00000395454 LRRC37A3O60309 1634 aa19.56■□□□□ 0.72
SCAF11-204ENST00000395454 DLG5Q8TDM6 1919 aa19.56■□□□□ 0.72
SCAF11-204ENST00000395454 TNS2Q63HR2 1409 aa19.56■□□□□ 0.72
SCAF11-204ENST00000395454 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 CT47B1P0C2W7 299 aaPredicted RBP19.55■□□□□ 0.72
SCAF11-204ENST00000395454 PLIN1O60240 522 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 NFE2L2Q16236 605 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 C1orf141Q5JVX7 400 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 CCDC136Q96JN2 1154 aa19.55■□□□□ 0.72
SCAF11-204ENST00000395454 SHANK3Q9BYB0 1731 aa19.53■□□□□ 0.72
SCAF11-204ENST00000395454 CYP27B1O15528 508 aa19.53■□□□□ 0.72
SCAF11-204ENST00000395454 RIPK4P57078 832 aa19.53■□□□□ 0.72
SCAF11-204ENST00000395454 IFNL2Q8IZJ0 200 aa19.53■□□□□ 0.72
SCAF11-204ENST00000395454 AKAP4Q5JQC9 854 aa19.52■□□□□ 0.72
SCAF11-204ENST00000395454 PHKG2P15735 406 aa19.51■□□□□ 0.71
SCAF11-204ENST00000395454 FANCIQ9NVI1 1328 aa19.51■□□□□ 0.71
SCAF11-204ENST00000395454 GNAT3A8MTJ3 354 aa19.51■□□□□ 0.71
SCAF11-204ENST00000395454 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
SCAF11-204ENST00000395454 MAP3K5Q99683 1374 aa19.5■□□□□ 0.71
SCAF11-204ENST00000395454 C20orf194Q5TEA3 1177 aa19.5■□□□□ 0.71
SCAF11-204ENST00000395454 RGS12O14924 1447 aa19.5■□□□□ 0.71
SCAF11-204ENST00000395454 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
SCAF11-204ENST00000395454 RTF1Q92541 710 aaKnown RBP19.49■□□□□ 0.71
SCAF11-204ENST00000395454 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
SCAF11-204ENST00000395454 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
SCAF11-204ENST00000395454 MARCH10Q8NA82 808 aaPredicted RBP19.49■□□□□ 0.71
SCAF11-204ENST00000395454 BRWD3Q6RI45 1802 aa19.49■□□□□ 0.71
SCAF11-204ENST00000395454 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
SCAF11-204ENST00000395454 BCAR3O75815 825 aa19.48■□□□□ 0.71
SCAF11-204ENST00000395454 LMOD3Q0VAK6 560 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms