RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
HERC4-203ENST00000395185 APBA3O96018 575 aa11.34□□□□□ -0.59
HERC4-203ENST00000395185 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
HERC4-203ENST00000395185 SPDYE1Q8NFV5 336 aaPredicted RBP11.34□□□□□ -0.59
HERC4-203ENST00000395185 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
HERC4-203ENST00000395185 MARF1Q9Y4F3 1742 aaKnown RBP11.34□□□□□ -0.59
HERC4-203ENST00000395185 USP54Q70EL1 1684 aa11.33□□□□□ -0.6
HERC4-203ENST00000395185 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
HERC4-203ENST00000395185 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
HERC4-203ENST00000395185 RTL1A6NKG5 1358 aa11.32□□□□□ -0.6
HERC4-203ENST00000395185 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
HERC4-203ENST00000395185 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
HERC4-203ENST00000395185 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
HERC4-203ENST00000395185 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
HERC4-203ENST00000395185 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
HERC4-203ENST00000395185 FLT4P35916 1363 aa11.31□□□□□ -0.6
HERC4-203ENST00000395185 NFAT5O94916 1531 aa11.31□□□□□ -0.6
HERC4-203ENST00000395185 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
HERC4-203ENST00000395185 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
HERC4-203ENST00000395185 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 ANKRD26Q9UPS8 1709 aa11.31□□□□□ -0.6
HERC4-203ENST00000395185 PHRF1Q9P1Y6 1649 aaKnown RBP11.31□□□□□ -0.6
HERC4-203ENST00000395185 PLCH1Q4KWH8 1693 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 ABCA3Q99758 1704 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 IL13P35225 146 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 ABCC6O95255 1503 aa11.3□□□□□ -0.6
HERC4-203ENST00000395185 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
HERC4-203ENST00000395185 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
HERC4-203ENST00000395185 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
HERC4-203ENST00000395185 KIF20BQ96Q89 1820 aa11.29□□□□□ -0.6
HERC4-203ENST00000395185 FKBP8Q14318 412 aa11.28□□□□□ -0.6
HERC4-203ENST00000395185 SPG7Q9UQ90 795 aa11.28□□□□□ -0.6
HERC4-203ENST00000395185 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.6
HERC4-203ENST00000395185 LMO7Q8WWI1 1683 aa11.27□□□□□ -0.6
HERC4-203ENST00000395185 CRYBG1Q9Y4K1 1723 aa11.27□□□□□ -0.61
HERC4-203ENST00000395185 PLSCR1O15162 318 aa11.27□□□□□ -0.61
HERC4-203ENST00000395185 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
HERC4-203ENST00000395185 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
HERC4-203ENST00000395185 USHBP1Q8N6Y0 703 aa11.27□□□□□ -0.61
HERC4-203ENST00000395185 NRAPQ86VF7 1730 aa11.26□□□□□ -0.61
HERC4-203ENST00000395185 HMGB2P26583 209 aaKnown RBP11.26□□□□□ -0.61
HERC4-203ENST00000395185 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
HERC4-203ENST00000395185 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
HERC4-203ENST00000395185 EYA1Q99502 592 aa11.26□□□□□ -0.61
HERC4-203ENST00000395185 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
HERC4-203ENST00000395185 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
HERC4-203ENST00000395185 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
HERC4-203ENST00000395185 PLEKHF1Q96S99 279 aa11.25□□□□□ -0.61
HERC4-203ENST00000395185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.25□□□□□ -0.614e-7■■■□□ 15.5
HERC4-203ENST00000395185 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
HERC4-203ENST00000395185 FCHSD2O94868 740 aa11.24□□□□□ -0.61
HERC4-203ENST00000395185 PLEKHO1Q53GL0 409 aaPredicted RBP11.24□□□□□ -0.61
HERC4-203ENST00000395185 DISP2A7MBM2 1401 aa11.24□□□□□ -0.61
HERC4-203ENST00000395185 BCL9O00512 1426 aa11.24□□□□□ -0.61
HERC4-203ENST00000395185 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
HERC4-203ENST00000395185 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
HERC4-203ENST00000395185 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
HERC4-203ENST00000395185 COL18A1P39060 1754 aa11.23□□□□□ -0.61
HERC4-203ENST00000395185 KCNQ2O43526 872 aa11.22□□□□□ -0.61
HERC4-203ENST00000395185 MAP2P11137 1827 aaKnown RBP11.22□□□□□ -0.61
HERC4-203ENST00000395185 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
HERC4-203ENST00000395185 NGEFQ8N5V2 710 aa11.22□□□□□ -0.61
HERC4-203ENST00000395185 PCDH11XQ9BZA7 1347 aa11.22□□□□□ -0.61
HERC4-203ENST00000395185 PCDH11YQ9BZA8 1340 aa11.22□□□□□ -0.61
HERC4-203ENST00000395185 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
HERC4-203ENST00000395185 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 KDRP35968 1356 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 HSP90AB1P08238 724 aaKnown RBP11.21□□□□□ -0.61
HERC4-203ENST00000395185 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
HERC4-203ENST00000395185 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.615e-7■■■■□ 20.1
HERC4-203ENST00000395185 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 RUNDC1Q96C34 613 aa11.21□□□□□ -0.61
HERC4-203ENST00000395185 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
HERC4-203ENST00000395185 TXNRD1Q16881 649 aa11.2□□□□□ -0.62
HERC4-203ENST00000395185 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
HERC4-203ENST00000395185 PROM2Q8N271 834 aa11.2□□□□□ -0.62
HERC4-203ENST00000395185 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
HERC4-203ENST00000395185 ZNF521Q96K83 1311 aa11.19□□□□□ -0.62
HERC4-203ENST00000395185 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
HERC4-203ENST00000395185 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
HERC4-203ENST00000395185 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
HERC4-203ENST00000395185 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
HERC4-203ENST00000395185 APAF1O14727 1248 aa11.18□□□□□ -0.62
HERC4-203ENST00000395185 U2SURPO15042 1029 aaKnown RBP11.18□□□□□ -0.62
HERC4-203ENST00000395185 PRR29P0C7W0 189 aa11.18□□□□□ -0.62
HERC4-203ENST00000395185 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
HERC4-203ENST00000395185 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
HERC4-203ENST00000395185 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
HERC4-203ENST00000395185 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
HERC4-203ENST00000395185 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
HERC4-203ENST00000395185 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
HERC4-203ENST00000395185 STK32BQ9NY57 414 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms