RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
C15orf39-202ENST00000394987 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
C15orf39-202ENST00000394987 PTMSP20962 102 aa16.39■□□□□ 0.21
C15orf39-202ENST00000394987 RALYLQ86SE5 291 aaKnown RBP16.39■□□□□ 0.21
C15orf39-202ENST00000394987 CNNM1Q9NRU3 951 aa16.39■□□□□ 0.21
C15orf39-202ENST00000394987 YTHDC2Q9H6S0 1430 aaKnown RBP16.39■□□□□ 0.21
C15orf39-202ENST00000394987 KCNA6P17658 529 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 ASXL1Q8IXJ9 1541 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 COL17A1Q9UMD9 1497 aaPredicted RBP16.38■□□□□ 0.21
C15orf39-202ENST00000394987 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
C15orf39-202ENST00000394987 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
C15orf39-202ENST00000394987 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
C15orf39-202ENST00000394987 HSPA2P54652 639 aa16.37■□□□□ 0.21
C15orf39-202ENST00000394987 PDE4CQ08493 712 aa16.37■□□□□ 0.21
C15orf39-202ENST00000394987 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
C15orf39-202ENST00000394987 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
C15orf39-202ENST00000394987 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 ANXA1P04083 346 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 KCNH5Q8NCM2 988 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 TSPOAP1O95153 1857 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 NSD2O96028 1365 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 MLH3Q9UHC1 1453 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 PPIP5K1Q6PFW1 1433 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 ESPNB1AK53 854 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 ATP2B1P20020 1258 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 CCT4P50991 539 aaKnown RBP16.36■□□□□ 0.21
C15orf39-202ENST00000394987 AAMPQ13685 434 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
C15orf39-202ENST00000394987 BICD2Q8TD16 824 aa16.36■□□□□ 0.21
C15orf39-202ENST00000394987 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
C15orf39-202ENST00000394987 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
C15orf39-202ENST00000394987 ZFYVE16Q7Z3T8 1539 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
C15orf39-202ENST00000394987 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 TTC21BQ7Z4L5 1316 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
C15orf39-202ENST00000394987 CHMP4CQ96CF2 233 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
C15orf39-202ENST00000394987 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 TRIM29Q14134 588 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 BECN2A8MW95 431 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
C15orf39-202ENST00000394987 IGHDP01880 384 aa16.33■□□□□ 0.21
C15orf39-202ENST00000394987 ADCY10Q96PN6 1610 aa16.33■□□□□ 0.2
C15orf39-202ENST00000394987 SMARCA5O60264 1052 aaPredicted RBP16.33■□□□□ 0.2
C15orf39-202ENST00000394987 LTKP29376 864 aa16.33■□□□□ 0.2
C15orf39-202ENST00000394987 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.24e-8■■■■■ 35.1
C15orf39-202ENST00000394987 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
C15orf39-202ENST00000394987 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
C15orf39-202ENST00000394987 RRP9O43818 475 aaKnown RBP16.32■□□□□ 0.2
C15orf39-202ENST00000394987 CHD1LQ86WJ1 897 aa16.32■□□□□ 0.2
C15orf39-202ENST00000394987 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
C15orf39-202ENST00000394987 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
C15orf39-202ENST00000394987 AACSQ86V21 672 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 TPM4P67936 248 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 PUS7Q96PZ0 661 aaKnown RBP16.31■□□□□ 0.2
C15orf39-202ENST00000394987 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 ERICH2A1L162 156 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 MPHOSPH8Q99549 860 aa16.31■□□□□ 0.2
C15orf39-202ENST00000394987 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
C15orf39-202ENST00000394987 PRPF40AO75400 957 aaKnown RBP16.31■□□□□ 0.2
C15orf39-202ENST00000394987 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
C15orf39-202ENST00000394987 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
C15orf39-202ENST00000394987 TBC1D2BQ9UPU7 963 aa16.3■□□□□ 0.2
C15orf39-202ENST00000394987 PHF14O94880 888 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 GOLGA6L19H0YKK7 550 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 MCM4P33991 863 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 STK3Q13188 491 aa16.29■□□□□ 0.2
C15orf39-202ENST00000394987 JARID2Q92833 1246 aaPredicted RBP16.29■□□□□ 0.2
C15orf39-202ENST00000394987 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
C15orf39-202ENST00000394987 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
C15orf39-202ENST00000394987 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
C15orf39-202ENST00000394987 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
C15orf39-202ENST00000394987 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
C15orf39-202ENST00000394987 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
C15orf39-202ENST00000394987 TRIM27P14373 513 aa16.27■□□□□ 0.2
C15orf39-202ENST00000394987 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.19
C15orf39-202ENST00000394987 TMEM2Q9UHN6 1383 aa16.27■□□□□ 0.19
C15orf39-202ENST00000394987 PRDM15P57071 1507 aaPredicted RBP16.26■□□□□ 0.19
C15orf39-202ENST00000394987 NUCB2P80303 420 aa16.26■□□□□ 0.19
C15orf39-202ENST00000394987 CEBPZQ03701 1054 aaKnown RBP16.26■□□□□ 0.19
C15orf39-202ENST00000394987 TTC39AQ5SRH9 613 aa16.26■□□□□ 0.19
C15orf39-202ENST00000394987 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
C15orf39-202ENST00000394987 KDM5DQ9BY66 1539 aa16.26■□□□□ 0.19
C15orf39-202ENST00000394987 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
C15orf39-202ENST00000394987 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
C15orf39-202ENST00000394987 PANK2Q9BZ23 570 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms