RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CPSF7-202ENST00000394888 MCM10Q7L590 875 aa19.52■□□□□ 0.72
CPSF7-202ENST00000394888 LMO7Q8WWI1 1683 aa19.51■□□□□ 0.71
CPSF7-202ENST00000394888 FRAT2O75474 233 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-202ENST00000394888 KIF2CQ99661 725 aa19.5■□□□□ 0.71
CPSF7-202ENST00000394888 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
CPSF7-202ENST00000394888 CHD1LQ86WJ1 897 aa19.5■□□□□ 0.71
CPSF7-202ENST00000394888 CRYBG1Q9Y4K1 1723 aa19.5■□□□□ 0.71
CPSF7-202ENST00000394888 FLT4P35916 1363 aa19.5■□□□□ 0.71
CPSF7-202ENST00000394888 CALD1Q05682 793 aaKnown RBP19.49■□□□□ 0.71
CPSF7-202ENST00000394888 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
CPSF7-202ENST00000394888 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
CPSF7-202ENST00000394888 KCNA6P17658 529 aa19.48■□□□□ 0.71
CPSF7-202ENST00000394888 DDIT3P35638 169 aa19.48■□□□□ 0.71
CPSF7-202ENST00000394888 MSH6P52701 1360 aa19.48■□□□□ 0.71
CPSF7-202ENST00000394888 LMOD3Q0VAK6 560 aa19.46■□□□□ 0.71
CPSF7-202ENST00000394888 LNPKQ9C0E8 428 aa19.46■□□□□ 0.71
CPSF7-202ENST00000394888 EYA1Q99502 592 aa19.46■□□□□ 0.71
CPSF7-202ENST00000394888 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
CPSF7-202ENST00000394888 ADAMTS7Q9UKP4 1686 aa19.45■□□□□ 0.7
CPSF7-202ENST00000394888 RBM25P49756 843 aaKnown RBP19.44■□□□□ 0.7
CPSF7-202ENST00000394888 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
CPSF7-202ENST00000394888 GSPT1P15170 499 aaKnown RBP19.43■□□□□ 0.7
CPSF7-202ENST00000394888 BMP2KLQ5H9B9 411 aa19.43■□□□□ 0.7
CPSF7-202ENST00000394888 RTL5Q5HYW3 569 aaPredicted RBP19.42■□□□□ 0.7
CPSF7-202ENST00000394888 EID1Q9Y6B2 187 aa19.42■□□□□ 0.7
CPSF7-202ENST00000394888 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
CPSF7-202ENST00000394888 MIS18AQ9NYP9 233 aa19.41■□□□□ 0.7
CPSF7-202ENST00000394888 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
CPSF7-202ENST00000394888 C22orf23Q9BZE7 217 aa19.41■□□□□ 0.7
CPSF7-202ENST00000394888 SLIT3O75094 1523 aa19.41■□□□□ 0.7
CPSF7-202ENST00000394888 STRCP1A6NGW2 1772 aa19.4■□□□□ 0.7
CPSF7-202ENST00000394888 G2E3Q7L622 706 aa19.4■□□□□ 0.7
CPSF7-202ENST00000394888 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
CPSF7-202ENST00000394888 HOXC9P31274 260 aa19.4■□□□□ 0.7
CPSF7-202ENST00000394888 DCTPP1Q9H773 170 aa19.39■□□□□ 0.7
CPSF7-202ENST00000394888 THEMISQ8N1K5 641 aaPredicted RBP19.39■□□□□ 0.69
CPSF7-202ENST00000394888 ALS2Q96Q42 1657 aa19.39■□□□□ 0.69
CPSF7-202ENST00000394888 CD2BP2O95400 341 aaKnown RBP19.38■□□□□ 0.69
CPSF7-202ENST00000394888 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
CPSF7-202ENST00000394888 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
CPSF7-202ENST00000394888 PLEKHM2Q8IWE5 1019 aa19.38■□□□□ 0.69
CPSF7-202ENST00000394888 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
CPSF7-202ENST00000394888 SOX12O15370 315 aa19.37■□□□□ 0.69
CPSF7-202ENST00000394888 ANKRD44Q8N8A2 993 aa19.37■□□□□ 0.69
CPSF7-202ENST00000394888 OTUD7AQ8TE49 926 aaPredicted RBP19.36■□□□□ 0.69
CPSF7-202ENST00000394888 GSE1Q14687 1217 aa19.36■□□□□ 0.69
CPSF7-202ENST00000394888 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
CPSF7-202ENST00000394888 C16orf71Q8IYS4 520 aaPredicted RBP19.36■□□□□ 0.69
CPSF7-202ENST00000394888 MEIS3Q99687 375 aa19.36■□□□□ 0.69
CPSF7-202ENST00000394888 PTPRCP08575 1304 aa19.35■□□□□ 0.69
CPSF7-202ENST00000394888 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
CPSF7-202ENST00000394888 CEMIPQ8WUJ3 1361 aa19.35■□□□□ 0.69
CPSF7-202ENST00000394888 ADGRL3Q9HAR2 1447 aa19.35■□□□□ 0.69
CPSF7-202ENST00000394888 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
CPSF7-202ENST00000394888 SLKQ9H2G2 1235 aaPredicted RBP19.34■□□□□ 0.69
CPSF7-202ENST00000394888 SALL3Q9BXA9 1300 aa19.33■□□□□ 0.69
CPSF7-202ENST00000394888 AK9Q5TCS8 1911 aa19.33■□□□□ 0.68
CPSF7-202ENST00000394888 PXDNQ92626 1479 aa19.32■□□□□ 0.68
CPSF7-202ENST00000394888 COL18A1P39060 1754 aa19.32■□□□□ 0.68
CPSF7-202ENST00000394888 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
CPSF7-202ENST00000394888 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
CPSF7-202ENST00000394888 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
CPSF7-202ENST00000394888 C5P01031 1676 aa19.3■□□□□ 0.68
CPSF7-202ENST00000394888 SNX21Q969T3 373 aa19.3■□□□□ 0.68
CPSF7-202ENST00000394888 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
CPSF7-202ENST00000394888 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
CPSF7-202ENST00000394888 F6X3S4 739 aa19.29■□□□□ 0.68
CPSF7-202ENST00000394888 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
CPSF7-202ENST00000394888 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
CPSF7-202ENST00000394888 NLRP6P59044 892 aa19.29■□□□□ 0.68
CPSF7-202ENST00000394888 BECN1Q14457 450 aa19.29■□□□□ 0.68
CPSF7-202ENST00000394888 MST1RQ04912 1400 aa19.28■□□□□ 0.68
CPSF7-202ENST00000394888 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
CPSF7-202ENST00000394888 TTC22Q5TAA0 569 aa19.28■□□□□ 0.68
CPSF7-202ENST00000394888 IL27Q8NEV9 243 aa19.27■□□□□ 0.68
CPSF7-202ENST00000394888 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.68
CPSF7-202ENST00000394888 LMTK3Q96Q04 1460 aa19.27■□□□□ 0.68
CPSF7-202ENST00000394888 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.67
CPSF7-202ENST00000394888 XIRP1Q702N8 1843 aaKnown RBP19.26■□□□□ 0.67
CPSF7-202ENST00000394888 GLI3P10071 1580 aa19.26■□□□□ 0.67
CPSF7-202ENST00000394888 UPF2Q9HAU5 1272 aaKnown RBP19.26■□□□□ 0.67
CPSF7-202ENST00000394888 KIF1AQ12756 1690 aa19.26■□□□□ 0.67
CPSF7-202ENST00000394888 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
CPSF7-202ENST00000394888 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
CPSF7-202ENST00000394888 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
CPSF7-202ENST00000394888 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
CPSF7-202ENST00000394888 AMPHP49418 695 aa19.24■□□□□ 0.67
CPSF7-202ENST00000394888 RPAP2Q8IXW5 612 aaPredicted RBP19.24■□□□□ 0.67
CPSF7-202ENST00000394888 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
CPSF7-202ENST00000394888 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
CPSF7-202ENST00000394888 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
CPSF7-202ENST00000394888 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
CPSF7-202ENST00000394888 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
CPSF7-202ENST00000394888 SPRYD3Q8NCJ5 442 aa19.23■□□□□ 0.67
CPSF7-202ENST00000394888 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
CPSF7-202ENST00000394888 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
CPSF7-202ENST00000394888 IP6K1Q92551 441 aa19.22■□□□□ 0.67
CPSF7-202ENST00000394888 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
CPSF7-202ENST00000394888 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms