RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 MARF1Q9Y4F3 1742 aaKnown RBP19.32■□□□□ 0.68
UBE2D3-207ENST00000394801 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
UBE2D3-207ENST00000394801 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
UBE2D3-207ENST00000394801 INTS3Q68E01 1043 aaKnown RBP19.31■□□□□ 0.68
UBE2D3-207ENST00000394801 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
UBE2D3-207ENST00000394801 SIRT2Q8IXJ6 389 aa19.3■□□□□ 0.68
UBE2D3-207ENST00000394801 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
UBE2D3-207ENST00000394801 GAS2L2Q8NHY3 880 aa19.29■□□□□ 0.68
UBE2D3-207ENST00000394801 HOXC9P31274 260 aa19.28■□□□□ 0.68
UBE2D3-207ENST00000394801 BECN1Q14457 450 aa19.28■□□□□ 0.68
UBE2D3-207ENST00000394801 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
UBE2D3-207ENST00000394801 RGS12O14924 1447 aa19.28■□□□□ 0.68
UBE2D3-207ENST00000394801 PTPRCP08575 1304 aa19.27■□□□□ 0.68
UBE2D3-207ENST00000394801 FOXO3O43524 673 aa19.27■□□□□ 0.68
UBE2D3-207ENST00000394801 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
UBE2D3-207ENST00000394801 LNPKQ9C0E8 428 aa19.27■□□□□ 0.68
UBE2D3-207ENST00000394801 C1orf115Q9H7X2 142 aa19.27■□□□□ 0.67
UBE2D3-207ENST00000394801 ABTB2Q8N961 1025 aa19.26■□□□□ 0.67
UBE2D3-207ENST00000394801 PHF8Q9UPP1 1060 aa19.26■□□□□ 0.67
UBE2D3-207ENST00000394801 NWD1Q149M9 1564 aa19.26■□□□□ 0.67
UBE2D3-207ENST00000394801 NFKBIBQ15653 356 aa19.25■□□□□ 0.67
UBE2D3-207ENST00000394801 SETD1BQ9UPS6 1966 aaKnown RBP19.25■□□□□ 0.67
UBE2D3-207ENST00000394801 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
UBE2D3-207ENST00000394801 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
UBE2D3-207ENST00000394801 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
UBE2D3-207ENST00000394801 RTL1A6NKG5 1358 aa19.24■□□□□ 0.67
UBE2D3-207ENST00000394801 TSPYL4Q9UJ04 414 aa19.23■□□□□ 0.67
UBE2D3-207ENST00000394801 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
UBE2D3-207ENST00000394801 NUTM2GQ5VZR2 741 aa19.22■□□□□ 0.67
UBE2D3-207ENST00000394801 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
UBE2D3-207ENST00000394801 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
UBE2D3-207ENST00000394801 ADGRL3Q9HAR2 1447 aa19.21■□□□□ 0.67
UBE2D3-207ENST00000394801 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
UBE2D3-207ENST00000394801 GNAT3A8MTJ3 354 aa19.2■□□□□ 0.66
UBE2D3-207ENST00000394801 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
UBE2D3-207ENST00000394801 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
UBE2D3-207ENST00000394801 ANKRD44Q8N8A2 993 aa19.2■□□□□ 0.66
UBE2D3-207ENST00000394801 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
UBE2D3-207ENST00000394801 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
UBE2D3-207ENST00000394801 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
UBE2D3-207ENST00000394801 TBC1D2Q9BYX2 928 aa19.19■□□□□ 0.66
UBE2D3-207ENST00000394801 IP6K1Q92551 441 aa19.18■□□□□ 0.66
UBE2D3-207ENST00000394801 SOS1Q07889 1333 aaPredicted RBP19.18■□□□□ 0.66
UBE2D3-207ENST00000394801 NFAT5O94916 1531 aa19.17■□□□□ 0.66
UBE2D3-207ENST00000394801 MAP3K5Q99683 1374 aa19.17■□□□□ 0.66
UBE2D3-207ENST00000394801 RBM25P49756 843 aaKnown RBP19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 IL17REQ8NFR9 667 aa19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 LTN1O94822 1766 aa19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 NPHP4O75161 1426 aaPredicted RBP19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 MSH6P52701 1360 aa19.16■□□□□ 0.66
UBE2D3-207ENST00000394801 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
UBE2D3-207ENST00000394801 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.66
UBE2D3-207ENST00000394801 KCNH5Q8NCM2 988 aa19.14■□□□□ 0.66
UBE2D3-207ENST00000394801 CCT4P50991 539 aaKnown RBP19.14■□□□□ 0.65
UBE2D3-207ENST00000394801 PSME1Q06323 249 aa19.14■□□□□ 0.65
UBE2D3-207ENST00000394801 ESCO1Q5FWF5 840 aa19.14■□□□□ 0.65
UBE2D3-207ENST00000394801 G2E3Q7L622 706 aa19.14■□□□□ 0.65
UBE2D3-207ENST00000394801 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.65
UBE2D3-207ENST00000394801 TAF7Q15545 349 aaPredicted RBP19.13■□□□□ 0.65
UBE2D3-207ENST00000394801 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
UBE2D3-207ENST00000394801 LTV1Q96GA3 475 aaPredicted RBP19.13■□□□□ 0.65
UBE2D3-207ENST00000394801 MEIS3Q99687 375 aa19.13■□□□□ 0.65
UBE2D3-207ENST00000394801 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
UBE2D3-207ENST00000394801 PLEKHM2Q8IWE5 1019 aa19.12■□□□□ 0.65
UBE2D3-207ENST00000394801 STK31Q9BXU1 1019 aa19.12■□□□□ 0.65
UBE2D3-207ENST00000394801 CACNA1FO60840 1977 aa19.11■□□□□ 0.65
UBE2D3-207ENST00000394801 FRAT2O75474 233 aaPredicted RBP19.11■□□□□ 0.65
UBE2D3-207ENST00000394801 CEMIPQ8WUJ3 1361 aa19.11■□□□□ 0.65
UBE2D3-207ENST00000394801 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
UBE2D3-207ENST00000394801 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
UBE2D3-207ENST00000394801 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
UBE2D3-207ENST00000394801 FAM208AQ9UK61 1670 aaKnown RBP19.09■□□□□ 0.65
UBE2D3-207ENST00000394801 F6X3S4 739 aa19.08■□□□□ 0.64
UBE2D3-207ENST00000394801 FLIIQ13045 1269 aa19.08■□□□□ 0.64
UBE2D3-207ENST00000394801 USHBP1Q8N6Y0 703 aa19.08■□□□□ 0.64
UBE2D3-207ENST00000394801 SLKQ9H2G2 1235 aaPredicted RBP19.08■□□□□ 0.64
UBE2D3-207ENST00000394801 GSPT1P15170 499 aaKnown RBP19.07■□□□□ 0.64
UBE2D3-207ENST00000394801 SNX21Q969T3 373 aa19.07■□□□□ 0.64
UBE2D3-207ENST00000394801 EIF5BO60841 1220 aaKnown RBP19.07■□□□□ 0.64
UBE2D3-207ENST00000394801 HMMRO75330 724 aa19.07■□□□□ 0.64
UBE2D3-207ENST00000394801 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
UBE2D3-207ENST00000394801 SLC4A10Q6U841 1118 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 SLIT3O75094 1523 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 CDC45O75419 566 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 TTC22Q5TAA0 569 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 ARHGEF25Q86VW2 580 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 ORAI2Q96SN7 254 aa19.06■□□□□ 0.64
UBE2D3-207ENST00000394801 NCAPD2Q15021 1401 aa19.05■□□□□ 0.64
UBE2D3-207ENST00000394801 GSE1Q14687 1217 aa19.05■□□□□ 0.64
UBE2D3-207ENST00000394801 GCP02774 474 aa19.05■□□□□ 0.64
UBE2D3-207ENST00000394801 C16orf71Q8IYS4 520 aaPredicted RBP19.05■□□□□ 0.64
UBE2D3-207ENST00000394801 GNAI2P04899 355 aa19.04■□□□□ 0.64
UBE2D3-207ENST00000394801 KIF2CQ99661 725 aa19.04■□□□□ 0.64
UBE2D3-207ENST00000394801 FKBP5Q13451 457 aaPredicted RBP19.04■□□□□ 0.64
UBE2D3-207ENST00000394801 GNAI3P08754 354 aa19.03■□□□□ 0.64
UBE2D3-207ENST00000394801 PXDNLA1KZ92 1463 aa19.03■□□□□ 0.64
UBE2D3-207ENST00000394801 N4BP2Q86UW6 1770 aaPredicted RBP19.03■□□□□ 0.64
UBE2D3-207ENST00000394801 HSCBQ8IWL3 235 aa19.03■□□□□ 0.64
UBE2D3-207ENST00000394801 HOXB7P09629 217 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms