RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
PPARGC1B-203ENST00000394320 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 TXLNAP40222 546 aa17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
PPARGC1B-203ENST00000394320 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 KLHL34Q8N239 644 aa17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 CIZ1Q9ULV3 898 aaPredicted RBP17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 NFKBIBQ15653 356 aa17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 CDKL5O76039 1030 aa17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 MRE11P49959 708 aa17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
PPARGC1B-203ENST00000394320 ACEP12821 1306 aa17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 IKQ13123 557 aaPredicted RBP17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
PPARGC1B-203ENST00000394320 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 PIP4K2BP78356 416 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 RIMS2Q9UQ26 1411 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 GPS2Q13227 327 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
PPARGC1B-203ENST00000394320 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 FOSBP53539 338 aa17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 STK38Q15208 465 aa17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
PPARGC1B-203ENST00000394320 MSH6P52701 1360 aa17.14■□□□□ 0.33
PPARGC1B-203ENST00000394320 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 ASXL1Q8IXJ9 1541 aa17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 MX1P20591 662 aa17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 TRAK2O60296 914 aa17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 IFIT1P09914 478 aaKnown RBP17.13■□□□□ 0.33
PPARGC1B-203ENST00000394320 EXOC5O00471 708 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 IL27Q8NEV9 243 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 NPHP3Q7Z494 1330 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 KRT85P78386 507 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 METTL24Q5JXM2 366 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
PPARGC1B-203ENST00000394320 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
PPARGC1B-203ENST00000394320 DCTN1Q14203 1278 aa17.11■□□□□ 0.33
PPARGC1B-203ENST00000394320 WASF1Q92558 559 aa17.11■□□□□ 0.33
PPARGC1B-203ENST00000394320 ZNF287Q9HBT7 754 aa17.11■□□□□ 0.33
PPARGC1B-203ENST00000394320 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
PPARGC1B-203ENST00000394320 ZPR1O75312 459 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 NOL7Q9UMY1 257 aaKnown RBP17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 TDO2P48775 406 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 UBAC1Q9BSL1 405 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 LRP2BPQ9P2M1 347 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
PPARGC1B-203ENST00000394320 FLIIQ13045 1269 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 MPRIPQ6WCQ1 1025 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 CCAR2Q8N163 923 aaKnown RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 MYD88Q99836 296 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 FILIP1LQ4L180 1135 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 IFIT5Q13325 482 aaKnown RBP17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
PPARGC1B-203ENST00000394320 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.33
PPARGC1B-203ENST00000394320 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.33
PPARGC1B-203ENST00000394320 LARP1BQ659C4 914 aaKnown RBP17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 EPS15P42566 896 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 DACH1Q9UI36 760 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 CFAP45Q9UL16 551 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 MTMR7Q9Y216 660 aa17.08■□□□□ 0.32
PPARGC1B-203ENST00000394320 TSPY26PQ9H489 355 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms