RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
NDUFC1-202ENST00000394225 TNS2Q63HR2 1409 aa20.38■□□□□ 0.85
NDUFC1-202ENST00000394225 EXOC5O00471 708 aa20.38■□□□□ 0.85
NDUFC1-202ENST00000394225 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
NDUFC1-202ENST00000394225 MEGF6O75095 1541 aa20.37■□□□□ 0.85
NDUFC1-202ENST00000394225 OVOS2A0A0G2JMS6 1433 aa20.37■□□□□ 0.85
NDUFC1-202ENST00000394225 PLEKHG2Q9H7P9 1386 aa20.37■□□□□ 0.85
NDUFC1-202ENST00000394225 KDRP35968 1356 aa20.35■□□□□ 0.85
NDUFC1-202ENST00000394225 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
NDUFC1-202ENST00000394225 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
NDUFC1-202ENST00000394225 ZCRB1Q8TBF4 217 aaKnown RBP20.33■□□□□ 0.85
NDUFC1-202ENST00000394225 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
NDUFC1-202ENST00000394225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
NDUFC1-202ENST00000394225 PKD1L3Q7Z443 1732 aa20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 HMOX1P09601 288 aa20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 SPG7Q9UQ90 795 aa20.3■□□□□ 0.84
NDUFC1-202ENST00000394225 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
NDUFC1-202ENST00000394225 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
NDUFC1-202ENST00000394225 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
NDUFC1-202ENST00000394225 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
NDUFC1-202ENST00000394225 MARCH10Q8NA82 808 aaPredicted RBP20.28■□□□□ 0.84
NDUFC1-202ENST00000394225 SHANK3Q9BYB0 1731 aa20.27■□□□□ 0.84
NDUFC1-202ENST00000394225 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
NDUFC1-202ENST00000394225 BCL9O00512 1426 aa20.27■□□□□ 0.83
NDUFC1-202ENST00000394225 FAM182BQ5T319 152 aa20.26■□□□□ 0.83
NDUFC1-202ENST00000394225 EP400Q96L91 3159 aa20.26■□□□□ 0.83
NDUFC1-202ENST00000394225 FCHSD2O94868 740 aa20.25■□□□□ 0.83
NDUFC1-202ENST00000394225 WDR43Q15061 677 aaKnown RBP eCLIP20.24■□□□□ 0.83
NDUFC1-202ENST00000394225 DIEXFQ68CQ4 756 aaKnown RBP20.24■□□□□ 0.83
NDUFC1-202ENST00000394225 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
NDUFC1-202ENST00000394225 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
NDUFC1-202ENST00000394225 IFNL2Q8IZJ0 200 aa20.23■□□□□ 0.83
NDUFC1-202ENST00000394225 CYP27B1O15528 508 aa20.22■□□□□ 0.83
NDUFC1-202ENST00000394225 NEFMP07197 916 aa20.22■□□□□ 0.83
NDUFC1-202ENST00000394225 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
NDUFC1-202ENST00000394225 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
NDUFC1-202ENST00000394225 SOCS7O14512 581 aa20.21■□□□□ 0.83
NDUFC1-202ENST00000394225 ZNF530Q6P9A1 599 aaPredicted RBP20.21■□□□□ 0.83
NDUFC1-202ENST00000394225 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
NDUFC1-202ENST00000394225 PHKG2P15735 406 aa20.2■□□□□ 0.82
NDUFC1-202ENST00000394225 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
NDUFC1-202ENST00000394225 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
NDUFC1-202ENST00000394225 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
NDUFC1-202ENST00000394225 NKX1-1Q15270 411 aaPredicted RBP20.19■□□□□ 0.82
NDUFC1-202ENST00000394225 UPF1Q92900 1129 aaKnown RBP eCLIP20.19■□□□□ 0.82
NDUFC1-202ENST00000394225 SBF2Q86WG5 1849 aa20.18■□□□□ 0.82
NDUFC1-202ENST00000394225 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
NDUFC1-202ENST00000394225 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
NDUFC1-202ENST00000394225 NHSQ6T4R5 1651 aa20.17■□□□□ 0.82
NDUFC1-202ENST00000394225 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
NDUFC1-202ENST00000394225 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
NDUFC1-202ENST00000394225 TRIM37O94972 964 aa20.16■□□□□ 0.82
NDUFC1-202ENST00000394225 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
NDUFC1-202ENST00000394225 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
NDUFC1-202ENST00000394225 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
NDUFC1-202ENST00000394225 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
NDUFC1-202ENST00000394225 ACSBG1Q96GR2 724 aa20.15■□□□□ 0.82
NDUFC1-202ENST00000394225 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
NDUFC1-202ENST00000394225 TNS1Q9HBL0 1735 aaKnown RBP20.14■□□□□ 0.81
NDUFC1-202ENST00000394225 PHACTR3Q96KR7 559 aa20.14■□□□□ 0.81
NDUFC1-202ENST00000394225 ADAMTS8Q9UP79 889 aa20.14■□□□□ 0.81
NDUFC1-202ENST00000394225 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
NDUFC1-202ENST00000394225 KAT6BQ8WYB5 2073 aa20.12■□□□□ 0.81
NDUFC1-202ENST00000394225 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
NDUFC1-202ENST00000394225 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
NDUFC1-202ENST00000394225 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 TOGARAM1Q9Y4F4 1720 aa20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 GNAT3A8MTJ3 354 aa20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 BAG6P46379 1132 aa20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 PRIM1P49642 420 aaKnown RBP20.11■□□□□ 0.81
NDUFC1-202ENST00000394225 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
NDUFC1-202ENST00000394225 KCNQ2O43526 872 aa20.1■□□□□ 0.81
NDUFC1-202ENST00000394225 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
NDUFC1-202ENST00000394225 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
NDUFC1-202ENST00000394225 APBA3O96018 575 aa20.09■□□□□ 0.81
NDUFC1-202ENST00000394225 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
NDUFC1-202ENST00000394225 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.81
NDUFC1-202ENST00000394225 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
NDUFC1-202ENST00000394225 BTAF1O14981 1849 aa20.08■□□□□ 0.8
NDUFC1-202ENST00000394225 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
NDUFC1-202ENST00000394225 ITGB4P16144 1822 aa20.07■□□□□ 0.8
NDUFC1-202ENST00000394225 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
NDUFC1-202ENST00000394225 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
NDUFC1-202ENST00000394225 TMOD3Q9NYL9 352 aa20.07■□□□□ 0.8
NDUFC1-202ENST00000394225 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 CABP4P57796 275 aa20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 PTF1AQ7RTS3 328 aa20.06■□□□□ 0.8
NDUFC1-202ENST00000394225 VIRMAQ69YN4 1812 aaKnown RBP20.05■□□□□ 0.8
NDUFC1-202ENST00000394225 PLSCR1O15162 318 aa20.05■□□□□ 0.8
NDUFC1-202ENST00000394225 MRC1P22897 1456 aa20.05■□□□□ 0.8
NDUFC1-202ENST00000394225 MIER1Q8N108 512 aa20.04■□□□□ 0.8
NDUFC1-202ENST00000394225 LGR6Q9HBX8 967 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms