RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 TAF7Q15545 349 aaPredicted RBP10.56□□□□□ -0.72
CHD2-201ENST00000394196 TSNAXIP1Q2TAA8 658 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 RNF187Q5TA31 235 aaPredicted RBP10.55□□□□□ -0.72
CHD2-201ENST00000394196 MAP7D1Q3KQU3 841 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 ANKRD62A6NC57 917 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 MCM6Q14566 821 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
CHD2-201ENST00000394196 EBAG9O00559 213 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 CAVIN2O95810 425 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 B4GALNT4Q76KP1 1039 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 FRAT2O75474 233 aaPredicted RBP10.55□□□□□ -0.72
CHD2-201ENST00000394196 CLNS1AP54105 237 aaKnown RBP10.55□□□□□ -0.72
CHD2-201ENST00000394196 ZNF397Q8NF99 534 aaPredicted RBP10.55□□□□□ -0.72
CHD2-201ENST00000394196 ZWINTO95229 277 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 RLBP1P12271 317 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 DESP17661 470 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 CNTROBQ8N137 903 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 CLCN1P35523 988 aa10.55□□□□□ -0.72
CHD2-201ENST00000394196 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 SEPT8Q92599 483 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 CEP57L1Q8IYX8 460 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 SART3Q15020 963 aaKnown RBP10.54□□□□□ -0.72
CHD2-201ENST00000394196 MIER3Q7Z3K6 550 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 SPC24Q8NBT2 197 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 MCM4P33991 863 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
CHD2-201ENST00000394196 STIM2Q9P246 746 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 EPB41L2O43491 1005 aaKnown RBP10.54□□□□□ -0.72
CHD2-201ENST00000394196 NEBLO76041 1014 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
CHD2-201ENST00000394196 KIF5CO60282 957 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 GSDMDP57764 484 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
CHD2-201ENST00000394196 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 MPHOSPH9Q99550 1183 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
CHD2-201ENST00000394196 CETN2P41208 172 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 G3V3G9 751 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 TERF1P54274 439 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 NBPF6Q5VWK0 638 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
CHD2-201ENST00000394196 NBPF4Q96M43 638 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 VCX3BQ9H321 246 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 CASQ1P31415 396 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 K7ELQ4 463 aaPredicted RBP10.53□□□□□ -0.72
CHD2-201ENST00000394196 TAOK3Q9H2K8 898 aa10.53□□□□□ -0.72
CHD2-201ENST00000394196 ZKSCAN8Q15776 578 aaPredicted RBP10.52□□□□□ -0.72
CHD2-201ENST00000394196 ARHGAP29Q52LW3 1261 aa10.52□□□□□ -0.72
CHD2-201ENST00000394196 COG6Q9Y2V7 657 aa10.52□□□□□ -0.72
CHD2-201ENST00000394196 SKIDA1Q1XH10 827 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 TTC14Q96N46 770 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 NUCB1Q02818 461 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 LRRC23Q53EV4 343 aaPredicted RBP10.52□□□□□ -0.73
CHD2-201ENST00000394196 THEGQ9P2T0 379 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 CCDC160A6NGH7 325 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 DIAPH1O60610 1272 aaKnown RBP10.52□□□□□ -0.73
CHD2-201ENST00000394196 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 TTC19Q6DKK2 380 aaPredicted RBP10.52□□□□□ -0.73
CHD2-201ENST00000394196 CASQ2O14958 399 aaPredicted RBP10.52□□□□□ -0.73
CHD2-201ENST00000394196 RFC1P35251 1148 aaPredicted RBP10.52□□□□□ -0.73
CHD2-201ENST00000394196 GCKP35557 465 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 CCDC110Q8TBZ0 833 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 TAF4BQ92750 862 aa10.52□□□□□ -0.73
CHD2-201ENST00000394196 LMAN1P49257 510 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 STMN4Q9H169 189 aaPredicted RBP10.51□□□□□ -0.73
CHD2-201ENST00000394196 CEP57Q86XR8 500 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 C9orf78Q9NZ63 289 aaPredicted RBP10.51□□□□□ -0.73
CHD2-201ENST00000394196 ARHGAP25P42331 645 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 IKQ13123 557 aaPredicted RBP10.51□□□□□ -0.73
CHD2-201ENST00000394196 SOGA3Q5TF21 947 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 CCDC121Q6ZUS5 278 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 OGFRQ9NZT2 677 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 SFPQP23246 707 aaKnown RBP eCLIP10.51□□□□□ -0.732e-6■■■□□ 14.7
CHD2-201ENST00000394196 CTAGE5O15320 804 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 G3BP1Q13283 466 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD2-201ENST00000394196 HS1BP3Q53T59 392 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 BICD1Q96G01 975 aa10.51□□□□□ -0.73
CHD2-201ENST00000394196 GFAPP14136 432 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
CHD2-201ENST00000394196 SKILP12757 684 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 PDE3AQ14432 1141 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 BUB1BO60566 1050 aaPredicted RBP10.5□□□□□ -0.73
CHD2-201ENST00000394196 LACTBP83111 547 aaPredicted RBP10.5□□□□□ -0.73
CHD2-201ENST00000394196 ZRANB2O95218 330 aaKnown RBP eCLIP10.5□□□□□ -0.733e-21■■■■■ 49.8
CHD2-201ENST00000394196 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD2-201ENST00000394196 CCDC172P0C7W6 258 aa10.5□□□□□ -0.73
CHD2-201ENST00000394196 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
CHD2-201ENST00000394196 EIF2AQ9BY44 585 aaKnown RBP10.5□□□□□ -0.73
CHD2-201ENST00000394196 NUP62CLQ9H1M0 184 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms