RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 RTN4Q9NQC3 1192 aaKnown RBP29.58■■■□□ 2.33
RARA-204ENST00000394089 HTATSF1O43719 755 aaKnown RBP29.57■■■□□ 2.32
RARA-204ENST00000394089 NBPF6Q5VWK0 638 aa29.57■■■□□ 2.32
RARA-204ENST00000394089 FRAT1Q92837 279 aaPredicted RBP29.57■■■□□ 2.32
RARA-204ENST00000394089 NBPF4Q96M43 638 aa29.57■■■□□ 2.32
RARA-204ENST00000394089 ALDH1L2Q3SY69 923 aa29.56■■■□□ 2.32
RARA-204ENST00000394089 BCL2L13Q9BXK5 485 aa29.56■■■□□ 2.32
RARA-204ENST00000394089 SSH1Q8WYL5 1049 aa29.55■■■□□ 2.32
RARA-204ENST00000394089 NCAPD2Q15021 1401 aa29.55■■■□□ 2.32
RARA-204ENST00000394089 GSE1Q14687 1217 aa29.55■■■□□ 2.32
RARA-204ENST00000394089 SMC4Q9NTJ3 1288 aa29.55■■■□□ 2.32
RARA-204ENST00000394089 CRB1P82279 1406 aa29.55■■■□□ 2.32
RARA-204ENST00000394089 PLEKHG5O94827 1062 aa29.54■■■□□ 2.32
RARA-204ENST00000394089 MCM10Q7L590 875 aa29.54■■■□□ 2.32
RARA-204ENST00000394089 RTF1Q92541 710 aaKnown RBP29.54■■■□□ 2.32
RARA-204ENST00000394089 CHL1O00533 1208 aa29.53■■■□□ 2.32
RARA-204ENST00000394089 CRYBG1Q9Y4K1 1723 aa29.53■■■□□ 2.32
RARA-204ENST00000394089 SOS2Q07890 1332 aaPredicted RBP29.52■■■□□ 2.32
RARA-204ENST00000394089 USHBP1Q8N6Y0 703 aa29.52■■■□□ 2.32
RARA-204ENST00000394089 ANKRD24Q8TF21 1146 aa29.52■■■□□ 2.32
RARA-204ENST00000394089 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
RARA-204ENST00000394089 CAMTA1Q9Y6Y1 1673 aa29.51■■■□□ 2.32
RARA-204ENST00000394089 VAMP4O75379 141 aa29.51■■■□□ 2.31
RARA-204ENST00000394089 ZKSCAN2Q63HK3 967 aa29.51■■■□□ 2.31
RARA-204ENST00000394089 ABCC6O95255 1503 aa29.51■■■□□ 2.31
RARA-204ENST00000394089 BRPF1P55201 1214 aaPredicted RBP29.5■■■□□ 2.31
RARA-204ENST00000394089 NPM2Q86SE8 214 aaKnown RBP29.5■■■□□ 2.31
RARA-204ENST00000394089 AXIN2Q9Y2T1 843 aa29.5■■■□□ 2.31
RARA-204ENST00000394089 ZC3H6P61129 1189 aaKnown RBP29.5■■■□□ 2.31
RARA-204ENST00000394089 PANK1Q8TE04 598 aa29.5■■■□□ 2.31
RARA-204ENST00000394089 RGPD2P0DJD1 1756 aa29.49■■■□□ 2.31
RARA-204ENST00000394089 GNAT3A8MTJ3 354 aa29.49■■■□□ 2.31
RARA-204ENST00000394089 LRRC59Q96AG4 307 aaKnown RBP29.49■■■□□ 2.31
RARA-204ENST00000394089 LRRC37A3O60309 1634 aa29.48■■■□□ 2.31
RARA-204ENST00000394089 MAP3K5Q99683 1374 aa29.48■■■□□ 2.31
RARA-204ENST00000394089 KIF16BQ96L93 1317 aa29.47■■■□□ 2.31
RARA-204ENST00000394089 TSPYL6Q8N831 410 aa29.47■■■□□ 2.31
RARA-204ENST00000394089 COL18A1P39060 1754 aa29.46■■■□□ 2.31
RARA-204ENST00000394089 CPDO75976 1380 aa29.46■■■□□ 2.31
RARA-204ENST00000394089 AAMPQ13685 434 aa29.46■■■□□ 2.31
RARA-204ENST00000394089 TWISTNBQ3B726 338 aaPredicted RBP29.46■■■□□ 2.31
RARA-204ENST00000394089 C8orf58Q8NAV2 365 aa29.45■■■□□ 2.31
RARA-204ENST00000394089 COG6Q9Y2V7 657 aa29.45■■■□□ 2.31
RARA-204ENST00000394089 ERBB3P21860 1342 aa29.45■■■□□ 2.31
RARA-204ENST00000394089 KIAA0232Q92628 1395 aa29.45■■■□□ 2.3
RARA-204ENST00000394089 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.45■■■□□ 2.3
RARA-204ENST00000394089 LMO7Q8WWI1 1683 aa29.44■■■□□ 2.3
RARA-204ENST00000394089 RLBP1P12271 317 aa29.44■■■□□ 2.3
RARA-204ENST00000394089 CABLES1Q8TDN4 633 aa29.44■■■□□ 2.3
RARA-204ENST00000394089 TNNQ9UQP3 1299 aa29.44■■■□□ 2.3
RARA-204ENST00000394089 RGPD5Q99666 1765 aa29.43■■■□□ 2.3
RARA-204ENST00000394089 NHSL1Q5SYE7 1610 aa29.43■■■□□ 2.3
RARA-204ENST00000394089 IPO8O15397 1037 aaKnown RBP29.43■■■□□ 2.3
RARA-204ENST00000394089 NOB1Q9ULX3 412 aaKnown RBP29.43■■■□□ 2.3
RARA-204ENST00000394089 ATF7IPQ6VMQ6 1270 aa29.42■■■□□ 2.3
RARA-204ENST00000394089 DZIP1LQ8IYY4 767 aaKnown RBP29.42■■■□□ 2.3
RARA-204ENST00000394089 HAP1P54257 671 aaPredicted RBP29.42■■■□□ 2.3
RARA-204ENST00000394089 BRPF3Q9ULD4 1205 aa29.42■■■□□ 2.3
RARA-204ENST00000394089 TRIM27P14373 513 aa29.4■■■□□ 2.3
RARA-204ENST00000394089 AMOTQ4VCS5 1084 aa29.4■■■□□ 2.3
RARA-204ENST00000394089 PLEKHO1Q53GL0 409 aaPredicted RBP29.4■■■□□ 2.3
RARA-204ENST00000394089 MRPL50Q8N5N7 158 aaKnown RBP29.4■■■□□ 2.3
RARA-204ENST00000394089 NFKBIBQ15653 356 aa29.39■■■□□ 2.3
RARA-204ENST00000394089 FTSJ3Q8IY81 847 aaKnown RBP29.39■■■□□ 2.3
RARA-204ENST00000394089 BABAM1Q9NWV8 329 aa29.39■■■□□ 2.3
RARA-204ENST00000394089 KDM2BQ8NHM5 1336 aa29.39■■■□□ 2.3
RARA-204ENST00000394089 ELL2O00472 640 aaPredicted RBP29.38■■■□□ 2.29
RARA-204ENST00000394089 IL17REQ8NFR9 667 aa29.38■■■□□ 2.29
RARA-204ENST00000394089 CLUAP1Q96AJ1 413 aa29.38■■■□□ 2.29
RARA-204ENST00000394089 MVPQ14764 893 aaKnown RBP29.38■■■□□ 2.29
RARA-204ENST00000394089 ARHGAP45Q92619 1136 aa29.37■■■□□ 2.29
RARA-204ENST00000394089 TSPYL4Q9UJ04 414 aa29.37■■■□□ 2.29
RARA-204ENST00000394089 CENPQQ7L2Z9 268 aaPredicted RBP29.37■■■□□ 2.29
RARA-204ENST00000394089 FAM208AQ9UK61 1670 aaKnown RBP29.36■■■□□ 2.29
RARA-204ENST00000394089 LTBP4Q8N2S1 1624 aa29.36■■■□□ 2.29
RARA-204ENST00000394089 CEMIPQ8WUJ3 1361 aa29.36■■■□□ 2.29
RARA-204ENST00000394089 AKAP4Q5JQC9 854 aa29.35■■■□□ 2.29
RARA-204ENST00000394089 MIS18AQ9NYP9 233 aa29.33■■■□□ 2.29
RARA-204ENST00000394089 TAF7Q15545 349 aaPredicted RBP29.32■■■□□ 2.28
RARA-204ENST00000394089 CHRNA2Q15822 529 aa29.32■■■□□ 2.28
RARA-204ENST00000394089 ZNF530Q6P9A1 599 aaPredicted RBP29.32■■■□□ 2.28
RARA-204ENST00000394089 PLEKHG2Q9H7P9 1386 aa29.32■■■□□ 2.28
RARA-204ENST00000394089 KRT24Q2M2I5 525 aa29.31■■■□□ 2.28
RARA-204ENST00000394089 ABCA3Q99758 1704 aa29.3■■■□□ 2.28
RARA-204ENST00000394089 FAM43AQ8N2R8 423 aa29.3■■■□□ 2.28
RARA-204ENST00000394089 NLRP2Q9NX02 1062 aa29.3■■■□□ 2.28
RARA-204ENST00000394089 DDX19BQ9UMR2 479 aa29.29■■■□□ 2.28
RARA-204ENST00000394089 OVOS2A0A0G2JMS6 1433 aa29.29■■■□□ 2.28
RARA-204ENST00000394089 CSB-PGBD3P0DP91 1061 aa29.28■■■□□ 2.28
RARA-204ENST00000394089 C1orf141Q5JVX7 400 aa29.27■■■□□ 2.28
RARA-204ENST00000394089 TMEM57Q8N5G2 664 aa29.27■■■□□ 2.28
RARA-204ENST00000394089 SOS1Q07889 1333 aaPredicted RBP29.27■■■□□ 2.28
RARA-204ENST00000394089 RAPGEF4Q8WZA2 1011 aa29.27■■■□□ 2.28
RARA-204ENST00000394089 PRDM11Q9NQV5 511 aa29.26■■■□□ 2.27
RARA-204ENST00000394089 LGR6Q9HBX8 967 aa29.25■■■□□ 2.27
RARA-204ENST00000394089 ITPRIPQ8IWB1 547 aa29.25■■■□□ 2.27
RARA-204ENST00000394089 API5Q9BZZ5 524 aaKnown RBP29.25■■■□□ 2.27
RARA-204ENST00000394089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.24■■■□□ 2.27
RARA-204ENST00000394089 ROBO1Q9Y6N7 1651 aa29.24■■■□□ 2.27
RARA-204ENST00000394089 TATP17735 454 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms