RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 MLH3Q9UHC1 1453 aa27.8■■■□□ 2.04
RARA-202ENST00000394081 CPSF1Q10570 1443 aaKnown RBP27.8■■■□□ 2.04
RARA-202ENST00000394081 HAP1P54257 671 aaPredicted RBP27.79■■■□□ 2.04
RARA-202ENST00000394081 KIAA2012Q0VF49 1180 aa27.79■■■□□ 2.04
RARA-202ENST00000394081 ERC2O15083 957 aa27.78■■■□□ 2.04
RARA-202ENST00000394081 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
RARA-202ENST00000394081 TRHP20396 242 aaPredicted RBP27.78■■■□□ 2.04
RARA-202ENST00000394081 PHF14O94880 888 aa27.77■■■□□ 2.04
RARA-202ENST00000394081 TSPY26PQ9H489 355 aa27.77■■■□□ 2.04
RARA-202ENST00000394081 BRD1O95696 1058 aa27.76■■■□□ 2.04
RARA-202ENST00000394081 POLKQ9UBT6 870 aa27.76■■■□□ 2.04
RARA-202ENST00000394081 FAM184AQ8NB25 1140 aa27.76■■■□□ 2.03
RARA-202ENST00000394081 PHACTR3Q96KR7 559 aa27.76■■■□□ 2.03
RARA-202ENST00000394081 UVSSAQ2YD98 709 aa27.75■■■□□ 2.03
RARA-202ENST00000394081 INTS4Q96HW7 963 aaKnown RBP27.75■■■□□ 2.03
RARA-202ENST00000394081 PRIMPOLQ96LW4 560 aa27.75■■■□□ 2.03
RARA-202ENST00000394081 CUL4AQ13619 759 aa27.75■■■□□ 2.03
RARA-202ENST00000394081 MYRIPQ8NFW9 859 aa27.75■■■□□ 2.03
RARA-202ENST00000394081 YTHDC2Q9H6S0 1430 aaKnown RBP27.75■■■□□ 2.03
RARA-202ENST00000394081 KLHL34Q8N239 644 aa27.74■■■□□ 2.03
RARA-202ENST00000394081 OSBPL3Q9H4L5 887 aa27.74■■■□□ 2.03
RARA-202ENST00000394081 HMGN5P82970 282 aaKnown RBP27.73■■■□□ 2.03
RARA-202ENST00000394081 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.03
RARA-202ENST00000394081 C16orf71Q8IYS4 520 aaPredicted RBP27.73■■■□□ 2.03
RARA-202ENST00000394081 CCDC94Q9BW85 323 aaPredicted RBP27.73■■■□□ 2.03
RARA-202ENST00000394081 ATP7BP35670 1465 aa27.72■■■□□ 2.03
RARA-202ENST00000394081 CEP85Q6P2H3 762 aa27.72■■■□□ 2.03
RARA-202ENST00000394081 CDK12Q9NYV4 1490 aaPredicted RBP27.72■■■□□ 2.03
RARA-202ENST00000394081 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
RARA-202ENST00000394081 C8orf58Q8NAV2 365 aa27.72■■■□□ 2.03
RARA-202ENST00000394081 RIMS2Q9UQ26 1411 aa27.71■■■□□ 2.03
RARA-202ENST00000394081 THUMPD2Q9BTF0 503 aaKnown RBP27.71■■■□□ 2.03
RARA-202ENST00000394081 NSFL1CQ9UNZ2 370 aaKnown RBP27.71■■■□□ 2.03
RARA-202ENST00000394081 POGZQ7Z3K3 1410 aa27.71■■■□□ 2.03
RARA-202ENST00000394081 TMX3Q96JJ7 454 aa27.71■■■□□ 2.03
RARA-202ENST00000394081 DLG5Q8TDM6 1919 aa27.7■■■□□ 2.03
RARA-202ENST00000394081 PTMAP06454 111 aaKnown RBP27.7■■■□□ 2.03
RARA-202ENST00000394081 GTF2F1P35269 517 aaKnown RBP eCLIP27.7■■■□□ 2.03
RARA-202ENST00000394081 UTP14CQ5TAP6 766 aaKnown RBP27.7■■■□□ 2.03
RARA-202ENST00000394081 MAP2P11137 1827 aaKnown RBP27.69■■■□□ 2.02
RARA-202ENST00000394081 ANAPC15P60006 121 aa27.69■■■□□ 2.02
RARA-202ENST00000394081 GGT6Q6P531 493 aa27.69■■■□□ 2.02
RARA-202ENST00000394081 IL17RAQ96F46 866 aa27.69■■■□□ 2.02
RARA-202ENST00000394081 RGS12O14924 1447 aa27.69■■■□□ 2.02
RARA-202ENST00000394081 ELL2O00472 640 aaPredicted RBP27.69■■■□□ 2.02
RARA-202ENST00000394081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.69■■■□□ 2.02
RARA-202ENST00000394081 RTL1A6NKG5 1358 aa27.68■■■□□ 2.02
RARA-202ENST00000394081 IL13P35225 146 aa27.68■■■□□ 2.02
RARA-202ENST00000394081 OTUD7AQ8TE49 926 aaPredicted RBP27.67■■■□□ 2.02
RARA-202ENST00000394081 PIBF1Q8WXW3 757 aa27.67■■■□□ 2.02
RARA-202ENST00000394081 MINK1Q8N4C8 1332 aaPredicted RBP27.67■■■□□ 2.02
RARA-202ENST00000394081 PTPRCP08575 1304 aa27.67■■■□□ 2.02
RARA-202ENST00000394081 PRAM1Q96QH2 718 aa27.66■■■□□ 2.02
RARA-202ENST00000394081 SLC52A1Q9NWF4 448 aa27.66■■■□□ 2.02
RARA-202ENST00000394081 AATKQ6ZMQ8 1374 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 HMMRO75330 724 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 HMOX1P09601 288 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 MCCP23508 829 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 NEK4P51957 841 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 STK26Q9P289 416 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 RNF214Q8ND24 703 aa27.65■■■□□ 2.02
RARA-202ENST00000394081 SSH2Q76I76 1423 aa27.64■■■□□ 2.02
RARA-202ENST00000394081 NUTM2DQ5VT03 806 aaPredicted RBP27.64■■■□□ 2.02
RARA-202ENST00000394081 CDK19Q9BWU1 502 aa27.64■■■□□ 2.01
RARA-202ENST00000394081 CABP1Q9NZU7 370 aa27.63■■■□□ 2.01
RARA-202ENST00000394081 KIAA0232Q92628 1395 aa27.63■■■□□ 2.01
RARA-202ENST00000394081 EPB41L2O43491 1005 aaKnown RBP27.62■■■□□ 2.01
RARA-202ENST00000394081 LETM1O95202 739 aaPredicted RBP27.62■■■□□ 2.01
RARA-202ENST00000394081 TMEM87AQ8NBN3 555 aa27.61■■■□□ 2.01
RARA-202ENST00000394081 PDE1AP54750 535 aa27.6■■■□□ 2.01
RARA-202ENST00000394081 DMTNQ08495 405 aa27.6■■■□□ 2.01
RARA-202ENST00000394081 SPTLC3Q9NUV7 552 aa27.6■■■□□ 2.01
RARA-202ENST00000394081 MSH6P52701 1360 aa27.6■■■□□ 2.01
RARA-202ENST00000394081 TUBGCP6Q96RT7 1819 aa27.59■■■□□ 2.01
RARA-202ENST00000394081 NOLC1Q14978 699 aaKnown RBP eCLIP27.58■■■□□ 2.01
RARA-202ENST00000394081 WDR33Q9C0J8 1336 aaKnown RBP27.58■■■□□ 2.01
RARA-202ENST00000394081 TMEM131LA2VDJ0 1609 aa27.58■■■□□ 2.01
RARA-202ENST00000394081 SMARCA5O60264 1052 aaPredicted RBP27.58■■■□□ 2.01
RARA-202ENST00000394081 IDI1Q13907 227 aa27.58■■■□□ 2.01
RARA-202ENST00000394081 EDC4Q6P2E9 1401 aaKnown RBP27.57■■■□□ 2
RARA-202ENST00000394081 DNTTIP2Q5QJE6 756 aaKnown RBP27.57■■■□□ 2
RARA-202ENST00000394081 ESYT1Q9BSJ8 1104 aa27.57■■■□□ 2
RARA-202ENST00000394081 DLC1Q96QB1 1528 aa27.57■■■□□ 2
RARA-202ENST00000394081 CHAMP1Q96JM3 812 aa27.57■■■□□ 2
RARA-202ENST00000394081 CCDC183Q5T5S1 534 aa27.55■■■□□ 2
RARA-202ENST00000394081 FKBP5Q13451 457 aaPredicted RBP27.55■■■□□ 2
RARA-202ENST00000394081 MYO5BQ9ULV0 1848 aa27.54■■■□□ 2
RARA-202ENST00000394081 SALL3Q9BXA9 1300 aa27.54■■■□□ 2
RARA-202ENST00000394081 ALKQ9UM73 1620 aa27.54■■■□□ 2
RARA-202ENST00000394081 FOXD4L5Q5VV16 416 aaPredicted RBP27.53■■■□□ 2
RARA-202ENST00000394081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
RARA-202ENST00000394081 FOXD4L4Q8WXT5 416 aaPredicted RBP27.53■■■□□ 2
RARA-202ENST00000394081 MEIS3Q99687 375 aa27.53■■■□□ 2
RARA-202ENST00000394081 GTPBP4Q9BZE4 634 aaKnown RBP27.52■■■□□ 2
RARA-202ENST00000394081 EMILIN1Q9Y6C2 1016 aa27.52■■■□□ 2
RARA-202ENST00000394081 CHL1O00533 1208 aa27.52■■■□□ 2
RARA-202ENST00000394081 ZSCAN20P17040 1043 aaPredicted RBP27.52■■■□□ 2
RARA-202ENST00000394081 KIF3AQ9Y496 699 aa27.52■■■□□ 2
RARA-202ENST00000394081 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
RARA-202ENST00000394081 TPM3P06753 285 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms