RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 EYA1Q99502 592 aa17.24■□□□□ 0.35
CCDC142-202ENST00000393965 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
CCDC142-202ENST00000393965 NUCB1Q02818 461 aa17.24■□□□□ 0.35
CCDC142-202ENST00000393965 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
CCDC142-202ENST00000393965 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
CCDC142-202ENST00000393965 NLRP6P59044 892 aa17.23■□□□□ 0.35
CCDC142-202ENST00000393965 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
CCDC142-202ENST00000393965 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
CCDC142-202ENST00000393965 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
CCDC142-202ENST00000393965 CALD1Q05682 793 aaKnown RBP17.21■□□□□ 0.35
CCDC142-202ENST00000393965 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 RGS12O14924 1447 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 CHL1O00533 1208 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 AMPHP49418 695 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 G2E3Q7L622 706 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
CCDC142-202ENST00000393965 NAP1L5Q96NT1 182 aaPredicted RBP17.21■□□□□ 0.35
CCDC142-202ENST00000393965 PANK2Q9BZ23 570 aa17.21■□□□□ 0.34
CCDC142-202ENST00000393965 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
CCDC142-202ENST00000393965 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
CCDC142-202ENST00000393965 LMOD3Q0VAK6 560 aa17.2■□□□□ 0.34
CCDC142-202ENST00000393965 CRB1P82279 1406 aa17.2■□□□□ 0.34
CCDC142-202ENST00000393965 F6X3S4 739 aa17.19■□□□□ 0.34
CCDC142-202ENST00000393965 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
CCDC142-202ENST00000393965 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
CCDC142-202ENST00000393965 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
CCDC142-202ENST00000393965 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
CCDC142-202ENST00000393965 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
CCDC142-202ENST00000393965 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
CCDC142-202ENST00000393965 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
CCDC142-202ENST00000393965 MSH6P52701 1360 aa17.17■□□□□ 0.34
CCDC142-202ENST00000393965 FLT4P35916 1363 aa17.16■□□□□ 0.34
CCDC142-202ENST00000393965 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
CCDC142-202ENST00000393965 SBNO1A3KN83 1393 aa17.16■□□□□ 0.34
CCDC142-202ENST00000393965 MEIS3Q99687 375 aa17.16■□□□□ 0.34
CCDC142-202ENST00000393965 NCLP19338 710 aaKnown RBP17.15■□□□□ 0.34
CCDC142-202ENST00000393965 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
CCDC142-202ENST00000393965 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
CCDC142-202ENST00000393965 HOXC9P31274 260 aa17.15■□□□□ 0.34
CCDC142-202ENST00000393965 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
CCDC142-202ENST00000393965 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
CCDC142-202ENST00000393965 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
CCDC142-202ENST00000393965 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
CCDC142-202ENST00000393965 ANTXR1Q9H6X2 564 aa17.14■□□□□ 0.33
CCDC142-202ENST00000393965 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
CCDC142-202ENST00000393965 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
CCDC142-202ENST00000393965 API5Q9BZZ5 524 aaKnown RBP17.13■□□□□ 0.33
CCDC142-202ENST00000393965 NWD1Q149M9 1564 aa17.13■□□□□ 0.33
CCDC142-202ENST00000393965 ARID3AQ99856 593 aa17.13■□□□□ 0.33
CCDC142-202ENST00000393965 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
CCDC142-202ENST00000393965 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
CCDC142-202ENST00000393965 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
CCDC142-202ENST00000393965 KDRP35968 1356 aa17.11■□□□□ 0.33
CCDC142-202ENST00000393965 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
CCDC142-202ENST00000393965 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
CCDC142-202ENST00000393965 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
CCDC142-202ENST00000393965 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
CCDC142-202ENST00000393965 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
CCDC142-202ENST00000393965 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
CCDC142-202ENST00000393965 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
CCDC142-202ENST00000393965 LTN1O94822 1766 aa17.1■□□□□ 0.33
CCDC142-202ENST00000393965 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
CCDC142-202ENST00000393965 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
CCDC142-202ENST00000393965 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 CEP85Q6P2H3 762 aa17.09■□□□□ 0.33
CCDC142-202ENST00000393965 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
CCDC142-202ENST00000393965 RRAGDQ9NQL2 400 aaPredicted RBP17.09■□□□□ 0.33
CCDC142-202ENST00000393965 ORAI2Q96SN7 254 aa17.08■□□□□ 0.33
CCDC142-202ENST00000393965 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.33
CCDC142-202ENST00000393965 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
CCDC142-202ENST00000393965 PLEKHM2Q8IWE5 1019 aa17.08■□□□□ 0.32
CCDC142-202ENST00000393965 KIAA0232Q92628 1395 aa17.07■□□□□ 0.32
CCDC142-202ENST00000393965 FOXD4L6Q3SYB3 417 aaPredicted RBP17.07■□□□□ 0.32
CCDC142-202ENST00000393965 FOXD4L3Q6VB84 417 aaPredicted RBP17.07■□□□□ 0.32
CCDC142-202ENST00000393965 KIF2CQ99661 725 aa17.07■□□□□ 0.32
CCDC142-202ENST00000393965 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
CCDC142-202ENST00000393965 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
CCDC142-202ENST00000393965 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
CCDC142-202ENST00000393965 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
CCDC142-202ENST00000393965 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
CCDC142-202ENST00000393965 DCTPP1Q9H773 170 aa17.06■□□□□ 0.32
CCDC142-202ENST00000393965 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
CCDC142-202ENST00000393965 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
CCDC142-202ENST00000393965 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
CCDC142-202ENST00000393965 TRAK2O60296 914 aa17.05■□□□□ 0.32
CCDC142-202ENST00000393965 KCNQ3O43525 872 aa17.04■□□□□ 0.32
CCDC142-202ENST00000393965 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
CCDC142-202ENST00000393965 GAS2L2Q8NHY3 880 aa17.03■□□□□ 0.32
CCDC142-202ENST00000393965 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
CCDC142-202ENST00000393965 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC142-202ENST00000393965 LRRC37A3O60309 1634 aa17.02■□□□□ 0.32
CCDC142-202ENST00000393965 ANXA1P04083 346 aa17.02■□□□□ 0.32
CCDC142-202ENST00000393965 MCM4P33991 863 aa17.02■□□□□ 0.32
CCDC142-202ENST00000393965 PSME1Q06323 249 aa17.02■□□□□ 0.32
CCDC142-202ENST00000393965 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.32
CCDC142-202ENST00000393965 EXOC6BQ9Y2D4 811 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms