RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 CLSPNQ9HAW4 1339 aa8.05□□□□□ -1.12
NPM1-203ENST00000393820 SAMD9Q5K651 1589 aa8.05□□□□□ -1.12
NPM1-203ENST00000393820 HECW2Q9P2P5 1572 aa8.05□□□□□ -1.12
NPM1-203ENST00000393820 CD2BP2O95400 341 aaKnown RBP8.05□□□□□ -1.12
NPM1-203ENST00000393820 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
NPM1-203ENST00000393820 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
NPM1-203ENST00000393820 PRM3Q9NNZ6 103 aa8.04□□□□□ -1.12
NPM1-203ENST00000393820 PLEKHD1A6NEE1 506 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 AP1G2O75843 785 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 FMNL1O95466 1100 aaPredicted RBP8.03□□□□□ -1.12
NPM1-203ENST00000393820 TMCO4Q5TGY1 634 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
NPM1-203ENST00000393820 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
NPM1-203ENST00000393820 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 PRDM9Q9NQV7 894 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 RAPGEF6Q8TEU7 1601 aa8.03□□□□□ -1.12
NPM1-203ENST00000393820 Q3C1V9 767 aa8.02□□□□□ -1.13
NPM1-203ENST00000393820 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
NPM1-203ENST00000393820 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
NPM1-203ENST00000393820 SPSB2Q99619 263 aa8.02□□□□□ -1.13
NPM1-203ENST00000393820 USB1Q9BQ65 265 aaKnown RBP8.02□□□□□ -1.13
NPM1-203ENST00000393820 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 GZF1Q9H116 711 aaPredicted RBP8.01□□□□□ -1.13
NPM1-203ENST00000393820 SENP2Q9HC62 589 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 KIF21BO75037 1637 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 EFCAB5A4FU69 1503 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 ATP13A2Q9NQ11 1180 aa8.01□□□□□ -1.13
NPM1-203ENST00000393820 NUP153P49790 1475 aaKnown RBP8.01□□□□□ -1.13
NPM1-203ENST00000393820 PTPRMP28827 1452 aa8□□□□□ -1.13
NPM1-203ENST00000393820 TTC24A2A3L6 582 aaPredicted RBP8□□□□□ -1.13
NPM1-203ENST00000393820 GPR37L1O60883 481 aa8□□□□□ -1.13
NPM1-203ENST00000393820 RAPGEF3O95398 923 aa8□□□□□ -1.13
NPM1-203ENST00000393820 SNRPBP14678 240 aaKnown RBP8□□□□□ -1.13
NPM1-203ENST00000393820 PBXIP1Q96AQ6 731 aa8□□□□□ -1.13
NPM1-203ENST00000393820 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
NPM1-203ENST00000393820 FHOD3Q2V2M9 1422 aa8□□□□□ -1.13
NPM1-203ENST00000393820 VPS8Q8N3P4 1428 aa8□□□□□ -1.13
NPM1-203ENST00000393820 CFAP74Q9C0B2 1584 aa8□□□□□ -1.13
NPM1-203ENST00000393820 ADAMTSL3P82987 1691 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 MAGI2Q86UL8 1455 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
NPM1-203ENST00000393820 MFAP1P55081 439 aaKnown RBP7.99□□□□□ -1.13
NPM1-203ENST00000393820 PDE4CQ08493 712 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 NDUFB9Q9Y6M9 179 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 CLIP1P30622 1438 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 POGZQ7Z3K3 1410 aa7.99□□□□□ -1.13
NPM1-203ENST00000393820 DENND4BO75064 1496 aaPredicted RBP7.98□□□□□ -1.13
NPM1-203ENST00000393820 CDK11AQ9UQ88 783 aaPredicted RBP7.98□□□□□ -1.13
NPM1-203ENST00000393820 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
NPM1-203ENST00000393820 AKNAQ7Z591 1439 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 FBXO41Q8TF61 875 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 LRRN4Q8WUT4 740 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 FANCAO15360 1455 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 ARID4BQ4LE39 1312 aaPredicted RBP7.97□□□□□ -1.13
NPM1-203ENST00000393820 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
NPM1-203ENST00000393820 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
NPM1-203ENST00000393820 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 SLC16A10Q8TF71 515 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 USTQ9Y2C2 406 aa7.97□□□□□ -1.13
NPM1-203ENST00000393820 BCORL1Q5H9F3 1711 aa7.96□□□□□ -1.14
NPM1-203ENST00000393820 KIFC2Q96AC6 838 aa7.96□□□□□ -1.14
NPM1-203ENST00000393820 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.14
NPM1-203ENST00000393820 HMX1Q9NP08 348 aaPredicted RBP7.96□□□□□ -1.14
NPM1-203ENST00000393820 FCF1Q9Y324 198 aaKnown RBP7.96□□□□□ -1.14
NPM1-203ENST00000393820 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
NPM1-203ENST00000393820 ZMYM4Q5VZL5 1548 aa7.95□□□□□ -1.14
NPM1-203ENST00000393820 ARHGEF40Q8TER5 1519 aa7.95□□□□□ -1.14
NPM1-203ENST00000393820 PATL2C9JE40 543 aaKnown RBP7.95□□□□□ -1.14
NPM1-203ENST00000393820 ZSCAN1Q8NBB4 408 aa7.95□□□□□ -1.14
NPM1-203ENST00000393820 PLCH2O75038 1416 aa7.95□□□□□ -1.14
NPM1-203ENST00000393820 FRMPD1Q5SYB0 1578 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 BRD1O95696 1058 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 JUNDP17535 347 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 KCNA1Q09470 495 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 WASHC4Q2M389 1173 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 MSS51Q4VC12 460 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 HELBQ8NG08 1087 aaPredicted RBP7.94□□□□□ -1.14
NPM1-203ENST00000393820 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
NPM1-203ENST00000393820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.94□□□□□ -1.145e-17■□□□□ 10.1
NPM1-203ENST00000393820 PCF11O94913 1555 aaKnown RBP7.94□□□□□ -1.14
NPM1-203ENST00000393820 RICTORQ6R327 1708 aa7.93□□□□□ -1.14
NPM1-203ENST00000393820 SMPD1P17405 629 aa7.93□□□□□ -1.14
NPM1-203ENST00000393820 EFCAB2Q5VUJ9 269 aa7.93□□□□□ -1.14
NPM1-203ENST00000393820 SNIP1Q8TAD8 396 aaKnown RBP7.93□□□□□ -1.14
NPM1-203ENST00000393820 YTHDC1Q96MU7 727 aaKnown RBP7.93□□□□□ -1.14
NPM1-203ENST00000393820 DXOO77932 396 aaKnown RBP7.93□□□□□ -1.14
NPM1-203ENST00000393820 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
NPM1-203ENST00000393820 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
NPM1-203ENST00000393820 ZBTB24O43167 697 aaPredicted RBP7.92□□□□□ -1.14
NPM1-203ENST00000393820 RFX1P22670 979 aa7.92□□□□□ -1.14
NPM1-203ENST00000393820 MMP16P51512 607 aa7.92□□□□□ -1.14
NPM1-203ENST00000393820 FOXD4L5Q5VV16 416 aaPredicted RBP7.92□□□□□ -1.14
NPM1-203ENST00000393820 LYPD8Q6UX82 237 aa7.92□□□□□ -1.14
NPM1-203ENST00000393820 FOXD4L4Q8WXT5 416 aaPredicted RBP7.92□□□□□ -1.14
NPM1-203ENST00000393820 LMTK3Q96Q04 1460 aa7.91□□□□□ -1.14
NPM1-203ENST00000393820 MADDQ8WXG6 1647 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms