RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 HAP1P54257 671 aaPredicted RBP32.36■■■□□ 2.77
SMARCD3-203ENST00000392811 RTF1Q92541 710 aaKnown RBP32.35■■■□□ 2.77
SMARCD3-203ENST00000392811 NWD1Q149M9 1564 aa32.35■■■□□ 2.77
SMARCD3-203ENST00000392811 GAS2L2Q8NHY3 880 aa32.34■■■□□ 2.77
SMARCD3-203ENST00000392811 ESCO1Q5FWF5 840 aa32.31■■■□□ 2.76
SMARCD3-203ENST00000392811 C1orf115Q9H7X2 142 aa32.31■■■□□ 2.76
SMARCD3-203ENST00000392811 MIS18AQ9NYP9 233 aa32.31■■■□□ 2.76
SMARCD3-203ENST00000392811 RTL1A6NKG5 1358 aa32.3■■■□□ 2.76
SMARCD3-203ENST00000392811 SLC4A3P48751 1232 aa32.29■■■□□ 2.76
SMARCD3-203ENST00000392811 NUCB1Q02818 461 aa32.29■■■□□ 2.76
SMARCD3-203ENST00000392811 LTN1O94822 1766 aa32.29■■■□□ 2.76
SMARCD3-203ENST00000392811 LTV1Q96GA3 475 aaPredicted RBP32.29■■■□□ 2.76
SMARCD3-203ENST00000392811 PSME1Q06323 249 aa32.27■■■□□ 2.76
SMARCD3-203ENST00000392811 TSPYL4Q9UJ04 414 aa32.27■■■□□ 2.76
SMARCD3-203ENST00000392811 DAXXQ9UER7 740 aaPredicted RBP32.27■■■□□ 2.76
SMARCD3-203ENST00000392811 NFAT5O94916 1531 aa32.26■■■□□ 2.76
SMARCD3-203ENST00000392811 RGS12O14924 1447 aa32.26■■■□□ 2.76
SMARCD3-203ENST00000392811 HTATSF1O43719 755 aaKnown RBP32.26■■■□□ 2.75
SMARCD3-203ENST00000392811 LRRC37A3O60309 1634 aa32.25■■■□□ 2.75
SMARCD3-203ENST00000392811 INTS3Q68E01 1043 aaKnown RBP32.24■■■□□ 2.75
SMARCD3-203ENST00000392811 CHD1LQ86WJ1 897 aa32.23■■■□□ 2.75
SMARCD3-203ENST00000392811 SIRT2Q8IXJ6 389 aa32.23■■■□□ 2.75
SMARCD3-203ENST00000392811 GNAT3A8MTJ3 354 aa32.22■■■□□ 2.75
SMARCD3-203ENST00000392811 GCC1Q96CN9 775 aa32.22■■■□□ 2.75
SMARCD3-203ENST00000392811 LNPKQ9C0E8 428 aa32.22■■■□□ 2.75
SMARCD3-203ENST00000392811 IP6K1Q92551 441 aa32.22■■■□□ 2.75
SMARCD3-203ENST00000392811 PTPRCP08575 1304 aa32.21■■■□□ 2.75
SMARCD3-203ENST00000392811 UPF2Q9HAU5 1272 aaKnown RBP32.2■■■□□ 2.75
SMARCD3-203ENST00000392811 MAP3K5Q99683 1374 aa32.19■■■□□ 2.74
SMARCD3-203ENST00000392811 USHBP1Q8N6Y0 703 aa32.19■■■□□ 2.74
SMARCD3-203ENST00000392811 ORAI2Q96SN7 254 aa32.19■■■□□ 2.74
SMARCD3-203ENST00000392811 SLC4A2P04920 1241 aa32.17■■■□□ 2.74
SMARCD3-203ENST00000392811 MSH6P52701 1360 aa32.17■■■□□ 2.74
SMARCD3-203ENST00000392811 KCNH5Q8NCM2 988 aa32.17■■■□□ 2.74
SMARCD3-203ENST00000392811 ANKRD45Q5TZF3 282 aa32.16■■■□□ 2.74
SMARCD3-203ENST00000392811 TBC1D32Q96NH3 1257 aa32.16■■■□□ 2.74
SMARCD3-203ENST00000392811 IL17REQ8NFR9 667 aa32.15■■■□□ 2.74
SMARCD3-203ENST00000392811 PHRF1Q9P1Y6 1649 aaKnown RBP32.13■■■□□ 2.73
SMARCD3-203ENST00000392811 XPCQ01831 940 aaPredicted RBP32.12■■■□□ 2.73
SMARCD3-203ENST00000392811 RTL5Q5HYW3 569 aaPredicted RBP32.12■■■□□ 2.73
SMARCD3-203ENST00000392811 NBPF6Q5VWK0 638 aa32.12■■■□□ 2.73
SMARCD3-203ENST00000392811 PROSER2Q86WR7 435 aaPredicted RBP32.12■■■□□ 2.73
SMARCD3-203ENST00000392811 NBPF4Q96M43 638 aa32.12■■■□□ 2.73
SMARCD3-203ENST00000392811 ZBTB7CA1YPR0 619 aa32.11■■■□□ 2.73
SMARCD3-203ENST00000392811 G2E3Q7L622 706 aa32.1■■■□□ 2.73
SMARCD3-203ENST00000392811 ATP10DQ9P241 1426 aa32.08■■■□□ 2.73
SMARCD3-203ENST00000392811 SLIT3O75094 1523 aa32.07■■■□□ 2.73
SMARCD3-203ENST00000392811 TAF7Q15545 349 aaPredicted RBP32.07■■■□□ 2.72
SMARCD3-203ENST00000392811 RGPD2P0DJD1 1756 aa32.06■■■□□ 2.72
SMARCD3-203ENST00000392811 GCP02774 474 aa32.06■■■□□ 2.72
SMARCD3-203ENST00000392811 ANKRD44Q8N8A2 993 aa32.06■■■□□ 2.72
SMARCD3-203ENST00000392811 BABAM1Q9NWV8 329 aa32.06■■■□□ 2.72
SMARCD3-203ENST00000392811 TRPM3Q9HCF6 1732 aaPredicted RBP32.06■■■□□ 2.72
SMARCD3-203ENST00000392811 FAM208AQ9UK61 1670 aaKnown RBP32.05■■■□□ 2.72
SMARCD3-203ENST00000392811 MFAP1P55081 439 aaKnown RBP32.05■■■□□ 2.72
SMARCD3-203ENST00000392811 STK31Q9BXU1 1019 aa32.05■■■□□ 2.72
SMARCD3-203ENST00000392811 BMP2KLQ5H9B9 411 aa32.04■■■□□ 2.72
SMARCD3-203ENST00000392811 MEIS3Q99687 375 aa32.04■■■□□ 2.72
SMARCD3-203ENST00000392811 DCTPP1Q9H773 170 aa32.04■■■□□ 2.72
SMARCD3-203ENST00000392811 BECN1Q14457 450 aa32.04■■■□□ 2.72
SMARCD3-203ENST00000392811 ARHGEF25Q86VW2 580 aa32.04■■■□□ 2.72
SMARCD3-203ENST00000392811 C1orf167Q5SNV9 1468 aa32.03■■■□□ 2.72
SMARCD3-203ENST00000392811 RPAP2Q8IXW5 612 aaPredicted RBP32.03■■■□□ 2.72
SMARCD3-203ENST00000392811 F6X3S4 739 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 CCDC30Q5VVM6 783 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 CEP85Q6P2H3 762 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 LRRC59Q96AG4 307 aaKnown RBP32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 KIF1AQ12756 1690 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 PLEKHG5O94827 1062 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 LMOD2Q6P5Q4 547 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 C19orf44Q9H6X5 657 aa32.02■■■□□ 2.72
SMARCD3-203ENST00000392811 CEMIPQ8WUJ3 1361 aa32.01■■■□□ 2.72
SMARCD3-203ENST00000392811 KRT28Q7Z3Y7 464 aa32.01■■■□□ 2.71
SMARCD3-203ENST00000392811 C22orf23Q9BZE7 217 aa32.01■■■□□ 2.71
SMARCD3-203ENST00000392811 USP35Q9P2H5 1018 aa32.01■■■□□ 2.71
SMARCD3-203ENST00000392811 SOS1Q07889 1333 aaPredicted RBP32.01■■■□□ 2.71
SMARCD3-203ENST00000392811 SLC4A10Q6U841 1118 aa32■■■□□ 2.71
SMARCD3-203ENST00000392811 CCT4P50991 539 aaKnown RBP32■■■□□ 2.71
SMARCD3-203ENST00000392811 NECTIN2Q92692 538 aa31.98■■■□□ 2.71
SMARCD3-203ENST00000392811 MED1Q15648 1581 aaPredicted RBP31.97■■■□□ 2.71
SMARCD3-203ENST00000392811 FLIIQ13045 1269 aa31.97■■■□□ 2.71
SMARCD3-203ENST00000392811 LGR6Q9HBX8 967 aa31.95■■■□□ 2.71
SMARCD3-203ENST00000392811 LMO7Q8WWI1 1683 aa31.95■■■□□ 2.7
SMARCD3-203ENST00000392811 DNAJC5Q9H3Z4 198 aa31.95■■■□□ 2.7
SMARCD3-203ENST00000392811 NCAPD2Q15021 1401 aa31.94■■■□□ 2.7
SMARCD3-203ENST00000392811 CACNA1FO60840 1977 aa31.94■■■□□ 2.7
SMARCD3-203ENST00000392811 DEKP35659 375 aaKnown RBP31.93■■■□□ 2.7
SMARCD3-203ENST00000392811 FKBP5Q13451 457 aaPredicted RBP31.93■■■□□ 2.7
SMARCD3-203ENST00000392811 ANKRD24Q8TF21 1146 aa31.93■■■□□ 2.7
SMARCD3-203ENST00000392811 NFKBIBQ15653 356 aa31.92■■■□□ 2.7
SMARCD3-203ENST00000392811 PLEKHO1Q53GL0 409 aaPredicted RBP31.92■■■□□ 2.7
SMARCD3-203ENST00000392811 ZNF530Q6P9A1 599 aaPredicted RBP31.92■■■□□ 2.7
SMARCD3-203ENST00000392811 TBC1D2Q9BYX2 928 aa31.92■■■□□ 2.7
SMARCD3-203ENST00000392811 AKAP4Q5JQC9 854 aa31.91■■■□□ 2.7
SMARCD3-203ENST00000392811 PLEKHM2Q8IWE5 1019 aa31.91■■■□□ 2.7
SMARCD3-203ENST00000392811 MST1RQ04912 1400 aa31.91■■■□□ 2.7
SMARCD3-203ENST00000392811 ALS2Q96Q42 1657 aa31.9■■■□□ 2.7
SMARCD3-203ENST00000392811 TMEM94Q12767 1356 aa31.9■■■□□ 2.7
SMARCD3-203ENST00000392811 STRCP1A6NGW2 1772 aa31.89■■■□□ 2.7
SMARCD3-203ENST00000392811 KDM3BQ7LBC6 1761 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 287.4 ms