RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
TRA2A-202ENST00000392502 U2SURPO15042 1029 aaKnown RBP19.92■□□□□ 0.78
TRA2A-202ENST00000392502 WDR63Q8IWG1 891 aa19.92■□□□□ 0.78
TRA2A-202ENST00000392502 KNDC1Q76NI1 1749 aa19.92■□□□□ 0.78
TRA2A-202ENST00000392502 RARSP54136 660 aaKnown RBP19.92■□□□□ 0.78
TRA2A-202ENST00000392502 SYCP1Q15431 976 aa19.92■□□□□ 0.78
TRA2A-202ENST00000392502 BCL2L13Q9BXK5 485 aa19.92■□□□□ 0.78
TRA2A-202ENST00000392502 COG6Q9Y2V7 657 aa19.92■□□□□ 0.78
TRA2A-202ENST00000392502 FBLN1P23142 703 aa19.91■□□□□ 0.78
TRA2A-202ENST00000392502 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
TRA2A-202ENST00000392502 PIBF1Q8WXW3 757 aa19.91■□□□□ 0.78
TRA2A-202ENST00000392502 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
TRA2A-202ENST00000392502 PLEKHF1Q96S99 279 aa19.9■□□□□ 0.78
TRA2A-202ENST00000392502 BCL2L12Q9HB09 334 aa19.9■□□□□ 0.78
TRA2A-202ENST00000392502 HDAC5Q9UQL6 1122 aa19.9■□□□□ 0.78
TRA2A-202ENST00000392502 KIF20BQ96Q89 1820 aa19.89■□□□□ 0.78
TRA2A-202ENST00000392502 HDGFL2Q7Z4V5 671 aaPredicted RBP19.89■□□□□ 0.77
TRA2A-202ENST00000392502 SLFN14P0C7P3 912 aa19.88■□□□□ 0.77
TRA2A-202ENST00000392502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRA2A-202ENST00000392502 RLBP1P12271 317 aa19.87■□□□□ 0.77
TRA2A-202ENST00000392502 ZSCAN23Q3MJ62 389 aa19.87■□□□□ 0.77
TRA2A-202ENST00000392502 RBSNQ9H1K0 784 aa19.87■□□□□ 0.77
TRA2A-202ENST00000392502 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
TRA2A-202ENST00000392502 PSEN1P49768 467 aa19.87■□□□□ 0.77
TRA2A-202ENST00000392502 METP08581 1390 aa19.86■□□□□ 0.77
TRA2A-202ENST00000392502 SPDYE4A6NLX3 237 aa19.86■□□□□ 0.77
TRA2A-202ENST00000392502 MFAP1P55081 439 aaKnown RBP19.86■□□□□ 0.77
TRA2A-202ENST00000392502 CHAF1AQ13111 956 aaPredicted RBP19.86■□□□□ 0.77
TRA2A-202ENST00000392502 TSR2Q969E8 191 aaKnown RBP19.86■□□□□ 0.77
TRA2A-202ENST00000392502 CTR9Q6PD62 1173 aa19.86■□□□□ 0.77
TRA2A-202ENST00000392502 FER1L4A9Z1Z3 1794 aa19.85■□□□□ 0.77
TRA2A-202ENST00000392502 TMPOP42166 694 aaKnown RBP19.85■□□□□ 0.77
TRA2A-202ENST00000392502 SPTLC3Q9NUV7 552 aa19.85■□□□□ 0.77
TRA2A-202ENST00000392502 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
TRA2A-202ENST00000392502 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
TRA2A-202ENST00000392502 CTIFO43310 598 aaKnown RBP19.84■□□□□ 0.77
TRA2A-202ENST00000392502 NOLC1Q14978 699 aaKnown RBP eCLIP19.84■□□□□ 0.77
TRA2A-202ENST00000392502 APPP05067 770 aa19.83■□□□□ 0.77
TRA2A-202ENST00000392502 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
TRA2A-202ENST00000392502 TERF2Q15554 542 aa19.83■□□□□ 0.76
TRA2A-202ENST00000392502 ATP7BP35670 1465 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 PTMAP06454 111 aaKnown RBP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 LRSAM1Q6UWE0 723 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 HOMEZQ8IX15 550 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 TRIM6-TRIM34B2RNG4 842 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 DIAPH1O60610 1272 aaKnown RBP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 BAG4O95429 457 aaKnown RBP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 TRIM34Q9BYJ4 488 aa19.82■□□□□ 0.76
TRA2A-202ENST00000392502 MORC2Q9Y6X9 1032 aaPredicted RBP19.82■□□□□ 0.76
TRA2A-202ENST00000392502 HSP90B1P14625 803 aaKnown RBP19.81■□□□□ 0.76
TRA2A-202ENST00000392502 U2AF2P26368 475 aaKnown RBP eCLIP19.81■□□□□ 0.763e-7■■□□□ 13.3
TRA2A-202ENST00000392502 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
TRA2A-202ENST00000392502 RWDD1Q9H446 243 aaPredicted RBP19.8■□□□□ 0.76
TRA2A-202ENST00000392502 ZRANB1Q9UGI0 708 aa19.8■□□□□ 0.76
TRA2A-202ENST00000392502 SAMD1Q6SPF0 538 aaPredicted RBP19.8■□□□□ 0.76
TRA2A-202ENST00000392502 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.8■□□□□ 0.767e-9■■■■■ 29.7
TRA2A-202ENST00000392502 POLKQ9UBT6 870 aa19.79■□□□□ 0.76
TRA2A-202ENST00000392502 UBR1Q8IWV7 1749 aa19.79■□□□□ 0.76
TRA2A-202ENST00000392502 ADAMTSL3P82987 1691 aa19.79■□□□□ 0.76
TRA2A-202ENST00000392502 WASLO00401 505 aaPredicted RBP19.79■□□□□ 0.76
TRA2A-202ENST00000392502 CAPN2P17655 700 aa19.79■□□□□ 0.76
TRA2A-202ENST00000392502 EXOSC9Q06265 439 aaKnown RBP19.79■□□□□ 0.76
TRA2A-202ENST00000392502 DDX41Q9UJV9 622 aaKnown RBP19.79■□□□□ 0.76
TRA2A-202ENST00000392502 CPS1P31327 1500 aa19.79■□□□□ 0.76
TRA2A-202ENST00000392502 NUCB2P80303 420 aa19.78■□□□□ 0.76
TRA2A-202ENST00000392502 PCDHB15Q9Y5E8 787 aa19.78■□□□□ 0.76
TRA2A-202ENST00000392502 TECPR2O15040 1411 aa19.78■□□□□ 0.76
TRA2A-202ENST00000392502 PRIM1P49642 420 aaKnown RBP19.78■□□□□ 0.76
TRA2A-202ENST00000392502 PDZRN3Q9UPQ7 1066 aa19.78■□□□□ 0.76
TRA2A-202ENST00000392502 PPIP5K1Q6PFW1 1433 aa19.77■□□□□ 0.76
TRA2A-202ENST00000392502 NME9Q86XW9 330 aa19.77■□□□□ 0.76
TRA2A-202ENST00000392502 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
TRA2A-202ENST00000392502 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.75
TRA2A-202ENST00000392502 FAM135BQ49AJ0 1406 aa19.77■□□□□ 0.75
TRA2A-202ENST00000392502 HDGFP51858 240 aaKnown RBP19.76■□□□□ 0.75
TRA2A-202ENST00000392502 CAVIN1Q6NZI2 390 aaKnown RBP19.76■□□□□ 0.75
TRA2A-202ENST00000392502 C3P01024 1663 aa19.76■□□□□ 0.75
TRA2A-202ENST00000392502 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 SOX12O15370 315 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 UVSSAQ2YD98 709 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 CTNNA3Q9UI47 895 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 EMILIN1Q9Y6C2 1016 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 MAP2P11137 1827 aaKnown RBP19.75■□□□□ 0.75
TRA2A-202ENST00000392502 RIMS1Q86UR5 1692 aaKnown RBP19.75■□□□□ 0.75
TRA2A-202ENST00000392502 TNRQ92752 1358 aa19.75■□□□□ 0.75
TRA2A-202ENST00000392502 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
TRA2A-202ENST00000392502 K7ELQ4 463 aaPredicted RBP19.74■□□□□ 0.75
TRA2A-202ENST00000392502 IGSF3O75054 1194 aa19.74■□□□□ 0.75
TRA2A-202ENST00000392502 TPM3P06753 285 aa19.74■□□□□ 0.75
TRA2A-202ENST00000392502 TNNT3P45378 269 aaPredicted RBP19.74■□□□□ 0.75
TRA2A-202ENST00000392502 KRT222Q8N1A0 295 aa19.74■□□□□ 0.75
TRA2A-202ENST00000392502 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
TRA2A-202ENST00000392502 FEZ2Q9UHY8 353 aaPredicted RBP19.74■□□□□ 0.75
TRA2A-202ENST00000392502 HMOX1P09601 288 aa19.73■□□□□ 0.75
TRA2A-202ENST00000392502 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
TRA2A-202ENST00000392502 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
TRA2A-202ENST00000392502 SSH1Q8WYL5 1049 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms