RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NBPF4Q96M43 638 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 KIF16BQ96L93 1317 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 COG6Q9Y2V7 657 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 RGPD2P0DJD1 1756 aa27.39■■□□□ 1.98
SPHK1-202ENST00000392496 CAMTA1Q9Y6Y1 1673 aa27.38■■□□□ 1.97
SPHK1-202ENST00000392496 USHBP1Q8N6Y0 703 aa27.37■■□□□ 1.97
SPHK1-202ENST00000392496 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
SPHK1-202ENST00000392496 CRYBG1Q9Y4K1 1723 aa27.37■■□□□ 1.97
SPHK1-202ENST00000392496 RLBP1P12271 317 aa27.37■■□□□ 1.97
SPHK1-202ENST00000392496 TWISTNBQ3B726 338 aaPredicted RBP27.37■■□□□ 1.97
SPHK1-202ENST00000392496 TSPYL6Q8N831 410 aa27.37■■□□□ 1.97
SPHK1-202ENST00000392496 KDM2BQ8NHM5 1336 aa27.36■■□□□ 1.97
SPHK1-202ENST00000392496 GNAT3A8MTJ3 354 aa27.36■■□□□ 1.97
SPHK1-202ENST00000392496 IPO8O15397 1037 aaKnown RBP27.36■■□□□ 1.97
SPHK1-202ENST00000392496 PLEKHG5O94827 1062 aa27.36■■□□□ 1.97
SPHK1-202ENST00000392496 DZIP1LQ8IYY4 767 aaKnown RBP27.36■■□□□ 1.97
SPHK1-202ENST00000392496 ANKRD24Q8TF21 1146 aa27.36■■□□□ 1.97
SPHK1-202ENST00000392496 TNNQ9UQP3 1299 aa27.36■■□□□ 1.97
SPHK1-202ENST00000392496 ATF7IPQ6VMQ6 1270 aa27.35■■□□□ 1.97
SPHK1-202ENST00000392496 ABCC6O95255 1503 aa27.35■■□□□ 1.97
SPHK1-202ENST00000392496 KIAA0232Q92628 1395 aa27.35■■□□□ 1.97
SPHK1-202ENST00000392496 MAP3K5Q99683 1374 aa27.35■■□□□ 1.97
SPHK1-202ENST00000392496 CENPQQ7L2Z9 268 aaPredicted RBP27.35■■□□□ 1.97
SPHK1-202ENST00000392496 C8orf58Q8NAV2 365 aa27.35■■□□□ 1.97
SPHK1-202ENST00000392496 NOB1Q9ULX3 412 aaKnown RBP27.35■■□□□ 1.97
SPHK1-202ENST00000392496 HAP1P54257 671 aaPredicted RBP27.34■■□□□ 1.97
SPHK1-202ENST00000392496 FTSJ3Q8IY81 847 aaKnown RBP27.34■■□□□ 1.97
SPHK1-202ENST00000392496 CLUAP1Q96AJ1 413 aa27.34■■□□□ 1.97
SPHK1-202ENST00000392496 TRIM27P14373 513 aa27.33■■□□□ 1.97
SPHK1-202ENST00000392496 RGPD5Q99666 1765 aa27.33■■□□□ 1.97
SPHK1-202ENST00000392496 ZC3H6P61129 1189 aaKnown RBP27.32■■□□□ 1.96
SPHK1-202ENST00000392496 LRRC59Q96AG4 307 aaKnown RBP27.32■■□□□ 1.96
SPHK1-202ENST00000392496 AXIN2Q9Y2T1 843 aa27.32■■□□□ 1.96
SPHK1-202ENST00000392496 SOS2Q07890 1332 aaPredicted RBP27.32■■□□□ 1.96
SPHK1-202ENST00000392496 ROBO1Q9Y6N7 1651 aa27.32■■□□□ 1.96
SPHK1-202ENST00000392496 COL18A1P39060 1754 aa27.32■■□□□ 1.96
SPHK1-202ENST00000392496 MVPQ14764 893 aaKnown RBP27.32■■□□□ 1.96
SPHK1-202ENST00000392496 MRPL50Q8N5N7 158 aaKnown RBP27.32■■□□□ 1.96
SPHK1-202ENST00000392496 LMO7Q8WWI1 1683 aa27.3■■□□□ 1.96
SPHK1-202ENST00000392496 ARHGAP45Q92619 1136 aa27.3■■□□□ 1.96
SPHK1-202ENST00000392496 ERBB3P21860 1342 aa27.29■■□□□ 1.96
SPHK1-202ENST00000392496 ELL2O00472 640 aaPredicted RBP27.29■■□□□ 1.96
SPHK1-202ENST00000392496 CPDO75976 1380 aa27.28■■□□□ 1.96
SPHK1-202ENST00000392496 PLEKHO1Q53GL0 409 aaPredicted RBP27.27■■□□□ 1.96
SPHK1-202ENST00000392496 BABAM1Q9NWV8 329 aa27.27■■□□□ 1.96
SPHK1-202ENST00000392496 AMOTQ4VCS5 1084 aa27.27■■□□□ 1.96
SPHK1-202ENST00000392496 TSPYL4Q9UJ04 414 aa27.27■■□□□ 1.96
SPHK1-202ENST00000392496 IL17REQ8NFR9 667 aa27.26■■□□□ 1.95
SPHK1-202ENST00000392496 CABLES1Q8TDN4 633 aa27.26■■□□□ 1.95
SPHK1-202ENST00000392496 NHSL1Q5SYE7 1610 aa27.26■■□□□ 1.95
SPHK1-202ENST00000392496 FAM208AQ9UK61 1670 aaKnown RBP27.25■■□□□ 1.95
SPHK1-202ENST00000392496 FBXO41Q8TF61 875 aa27.25■■□□□ 1.95
SPHK1-202ENST00000392496 DDX19BQ9UMR2 479 aa27.25■■□□□ 1.95
SPHK1-202ENST00000392496 TCERG1O14776 1098 aaKnown RBP27.23■■□□□ 1.95
SPHK1-202ENST00000392496 CEMIPQ8WUJ3 1361 aa27.23■■□□□ 1.95
SPHK1-202ENST00000392496 AKAP4Q5JQC9 854 aa27.22■■□□□ 1.95
SPHK1-202ENST00000392496 TAF7Q15545 349 aaPredicted RBP27.21■■□□□ 1.95
SPHK1-202ENST00000392496 TMEM57Q8N5G2 664 aa27.21■■□□□ 1.95
SPHK1-202ENST00000392496 MIS18AQ9NYP9 233 aa27.21■■□□□ 1.95
SPHK1-202ENST00000392496 KRT24Q2M2I5 525 aa27.2■■□□□ 1.95
SPHK1-202ENST00000392496 AHDC1Q5TGY3 1603 aaPredicted RBP27.2■■□□□ 1.94
SPHK1-202ENST00000392496 ZNF530Q6P9A1 599 aaPredicted RBP27.2■■□□□ 1.94
SPHK1-202ENST00000392496 ITPRIPQ8IWB1 547 aa27.2■■□□□ 1.94
SPHK1-202ENST00000392496 RBM19Q9Y4C8 960 aaKnown RBP27.2■■□□□ 1.94
SPHK1-202ENST00000392496 PLEKHG2Q9H7P9 1386 aa27.18■■□□□ 1.94
SPHK1-202ENST00000392496 API5Q9BZZ5 524 aaKnown RBP27.18■■□□□ 1.94
SPHK1-202ENST00000392496 SOS1Q07889 1333 aaPredicted RBP27.18■■□□□ 1.94
SPHK1-202ENST00000392496 IGHDP01880 384 aa27.17■■□□□ 1.94
SPHK1-202ENST00000392496 OVOS2A0A0G2JMS6 1433 aa27.17■■□□□ 1.94
SPHK1-202ENST00000392496 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
SPHK1-202ENST00000392496 PCDHB15Q9Y5E8 787 aa27.17■■□□□ 1.94
SPHK1-202ENST00000392496 ABCA3Q99758 1704 aa27.16■■□□□ 1.94
SPHK1-202ENST00000392496 CHRNA2Q15822 529 aa27.16■■□□□ 1.94
SPHK1-202ENST00000392496 NLRP2Q9NX02 1062 aa27.16■■□□□ 1.94
SPHK1-202ENST00000392496 ABCC4O15439 1325 aa27.16■■□□□ 1.94
SPHK1-202ENST00000392496 C1orf141Q5JVX7 400 aa27.15■■□□□ 1.94
SPHK1-202ENST00000392496 CHMP4BQ9H444 224 aaKnown RBP27.14■■□□□ 1.94
SPHK1-202ENST00000392496 CSB-PGBD3P0DP91 1061 aa27.13■■□□□ 1.93
SPHK1-202ENST00000392496 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
SPHK1-202ENST00000392496 VIRMAQ69YN4 1812 aaKnown RBP27.12■■□□□ 1.93
SPHK1-202ENST00000392496 LGR6Q9HBX8 967 aa27.12■■□□□ 1.93
SPHK1-202ENST00000392496 RWDD1Q9H446 243 aaPredicted RBP27.12■■□□□ 1.93
SPHK1-202ENST00000392496 ZBTB40Q9NUA8 1239 aa27.12■■□□□ 1.93
SPHK1-202ENST00000392496 KDM3BQ7LBC6 1761 aa27.11■■□□□ 1.93
SPHK1-202ENST00000392496 PTPRCP08575 1304 aa27.11■■□□□ 1.93
SPHK1-202ENST00000392496 ADAMTS7Q9UKP4 1686 aa27.11■■□□□ 1.93
SPHK1-202ENST00000392496 RNMTO43148 476 aaKnown RBP27.1■■□□□ 1.93
SPHK1-202ENST00000392496 TATP17735 454 aaPredicted RBP27.1■■□□□ 1.93
SPHK1-202ENST00000392496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.1■■□□□ 1.93
SPHK1-202ENST00000392496 PRDM11Q9NQV5 511 aa27.09■■□□□ 1.93
SPHK1-202ENST00000392496 HSPA1LP34931 641 aa27.09■■□□□ 1.93
SPHK1-202ENST00000392496 TEFQ10587 303 aa27.08■■□□□ 1.93
SPHK1-202ENST00000392496 MPRIPQ6WCQ1 1025 aa27.08■■□□□ 1.93
SPHK1-202ENST00000392496 MEGF6O75095 1541 aa27.07■■□□□ 1.92
SPHK1-202ENST00000392496 ZBTB7BO15156 539 aaPredicted RBP27.06■■□□□ 1.92
SPHK1-202ENST00000392496 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
SPHK1-202ENST00000392496 CCDC30Q5VVM6 783 aa27.06■■□□□ 1.92
SPHK1-202ENST00000392496 SPG7Q9UQ90 795 aa27.06■■□□□ 1.92
SPHK1-202ENST00000392496 CACNA1FO60840 1977 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms