RNA–Protein interactions for RNA: ENST00000392306.2

SH2D2A-203, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-203ENST00000392306 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
SH2D2A-203ENST00000392306 PXDNQ92626 1479 aa16.99■□□□□ 0.31
SH2D2A-203ENST00000392306 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
SH2D2A-203ENST00000392306 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SH2D2A-203ENST00000392306 NPHP3Q7Z494 1330 aa16.98■□□□□ 0.31
SH2D2A-203ENST00000392306 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
SH2D2A-203ENST00000392306 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 TWISTNBQ3B726 338 aaPredicted RBP16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 NOB1Q9ULX3 412 aaKnown RBP16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
SH2D2A-203ENST00000392306 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
SH2D2A-203ENST00000392306 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
SH2D2A-203ENST00000392306 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SH2D2A-203ENST00000392306 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
SH2D2A-203ENST00000392306 TNS3Q68CZ2 1445 aa16.96■□□□□ 0.31
SH2D2A-203ENST00000392306 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
SH2D2A-203ENST00000392306 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
SH2D2A-203ENST00000392306 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
SH2D2A-203ENST00000392306 COL18A1P39060 1754 aa16.95■□□□□ 0.3
SH2D2A-203ENST00000392306 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
SH2D2A-203ENST00000392306 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
SH2D2A-203ENST00000392306 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
SH2D2A-203ENST00000392306 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
SH2D2A-203ENST00000392306 IGHDP01880 384 aa16.93■□□□□ 0.3
SH2D2A-203ENST00000392306 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
SH2D2A-203ENST00000392306 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
SH2D2A-203ENST00000392306 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
SH2D2A-203ENST00000392306 SOS1Q07889 1333 aaPredicted RBP16.92■□□□□ 0.3
SH2D2A-203ENST00000392306 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
SH2D2A-203ENST00000392306 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
SH2D2A-203ENST00000392306 FAM208AQ9UK61 1670 aaKnown RBP16.91■□□□□ 0.3
SH2D2A-203ENST00000392306 RGPD5Q99666 1765 aa16.91■□□□□ 0.3
SH2D2A-203ENST00000392306 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
SH2D2A-203ENST00000392306 ABCC4O15439 1325 aa16.91■□□□□ 0.3
SH2D2A-203ENST00000392306 CPDO75976 1380 aa16.9■□□□□ 0.3
SH2D2A-203ENST00000392306 OVOS2A0A0G2JMS6 1433 aa16.9■□□□□ 0.3
SH2D2A-203ENST00000392306 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
SH2D2A-203ENST00000392306 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
SH2D2A-203ENST00000392306 ANKRD24Q8TF21 1146 aa16.89■□□□□ 0.29
SH2D2A-203ENST00000392306 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
SH2D2A-203ENST00000392306 ADAMTS7Q9UKP4 1686 aa16.89■□□□□ 0.29
SH2D2A-203ENST00000392306 ERBB3P21860 1342 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
SH2D2A-203ENST00000392306 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
SH2D2A-203ENST00000392306 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
SH2D2A-203ENST00000392306 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
SH2D2A-203ENST00000392306 CACNA1FO60840 1977 aa16.87■□□□□ 0.29
SH2D2A-203ENST00000392306 RGS12O14924 1447 aa16.86■□□□□ 0.29
SH2D2A-203ENST00000392306 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
SH2D2A-203ENST00000392306 LRRC59Q96AG4 307 aaKnown RBP16.86■□□□□ 0.29
SH2D2A-203ENST00000392306 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
SH2D2A-203ENST00000392306 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
SH2D2A-203ENST00000392306 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 PTPRCP08575 1304 aa16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 ZBTB7BO15156 539 aaPredicted RBP16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 PDE4AP27815 886 aa16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 KRT24Q2M2I5 525 aa16.85■□□□□ 0.29
SH2D2A-203ENST00000392306 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
SH2D2A-203ENST00000392306 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
SH2D2A-203ENST00000392306 SKAP1Q86WV1 359 aa16.82■□□□□ 0.28
SH2D2A-203ENST00000392306 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
SH2D2A-203ENST00000392306 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
SH2D2A-203ENST00000392306 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
SH2D2A-203ENST00000392306 MIS18AQ9NYP9 233 aa16.81■□□□□ 0.28
SH2D2A-203ENST00000392306 SMC5Q8IY18 1101 aa16.81■□□□□ 0.28
SH2D2A-203ENST00000392306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
SH2D2A-203ENST00000392306 HOXB7P09629 217 aa16.79■□□□□ 0.28
SH2D2A-203ENST00000392306 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
SH2D2A-203ENST00000392306 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
SH2D2A-203ENST00000392306 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
SH2D2A-203ENST00000392306 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
SH2D2A-203ENST00000392306 LGR6Q9HBX8 967 aa16.78■□□□□ 0.28
SH2D2A-203ENST00000392306 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
SH2D2A-203ENST00000392306 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
SH2D2A-203ENST00000392306 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
SH2D2A-203ENST00000392306 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
SH2D2A-203ENST00000392306 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
SH2D2A-203ENST00000392306 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
SH2D2A-203ENST00000392306 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
SH2D2A-203ENST00000392306 HEG1Q9ULI3 1381 aa16.76■□□□□ 0.27
SH2D2A-203ENST00000392306 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
SH2D2A-203ENST00000392306 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
SH2D2A-203ENST00000392306 C1orf141Q5JVX7 400 aa16.75■□□□□ 0.27
SH2D2A-203ENST00000392306 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
SH2D2A-203ENST00000392306 MEGF6O75095 1541 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms