RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
RPL13A-201ENST00000391857 TUBGCP6Q96RT7 1819 aa20.59■□□□□ 0.89
RPL13A-201ENST00000391857 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
RPL13A-201ENST00000391857 LTV1Q96GA3 475 aaPredicted RBP20.57■□□□□ 0.88
RPL13A-201ENST00000391857 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
RPL13A-201ENST00000391857 DNAJC5GQ8N7S2 189 aa20.55■□□□□ 0.88
RPL13A-201ENST00000391857 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
RPL13A-201ENST00000391857 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
RPL13A-201ENST00000391857 USP47Q96K76 1375 aa20.54■□□□□ 0.88
RPL13A-201ENST00000391857 LY75O60449 1722 aa20.53■□□□□ 0.88
RPL13A-201ENST00000391857 APLP1P51693 650 aa20.53■□□□□ 0.88
RPL13A-201ENST00000391857 USP54Q70EL1 1684 aa20.52■□□□□ 0.88
RPL13A-201ENST00000391857 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
RPL13A-201ENST00000391857 WWC3Q9ULE0 1092 aa20.52■□□□□ 0.88
RPL13A-201ENST00000391857 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.87
RPL13A-201ENST00000391857 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
RPL13A-201ENST00000391857 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
RPL13A-201ENST00000391857 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
RPL13A-201ENST00000391857 LTN1O94822 1766 aa20.49■□□□□ 0.87
RPL13A-201ENST00000391857 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
RPL13A-201ENST00000391857 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
RPL13A-201ENST00000391857 TOMM70O94826 608 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
RPL13A-201ENST00000391857 HOXC9P31274 260 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 MAP3K19Q56UN5 1328 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 MEGF6O75095 1541 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
RPL13A-201ENST00000391857 FBLN1P23142 703 aa20.46■□□□□ 0.87
RPL13A-201ENST00000391857 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
RPL13A-201ENST00000391857 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
RPL13A-201ENST00000391857 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
RPL13A-201ENST00000391857 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
RPL13A-201ENST00000391857 PALLDQ8WX93 1383 aa20.44■□□□□ 0.86
RPL13A-201ENST00000391857 AMPHP49418 695 aa20.43■□□□□ 0.86
RPL13A-201ENST00000391857 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
RPL13A-201ENST00000391857 AK7Q96M32 723 aa20.42■□□□□ 0.86
RPL13A-201ENST00000391857 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
RPL13A-201ENST00000391857 A0A1W2PP64 1363 aa20.42■□□□□ 0.86
RPL13A-201ENST00000391857 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
RPL13A-201ENST00000391857 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.41■□□□□ 0.86
RPL13A-201ENST00000391857 MPRIPQ6WCQ1 1025 aa20.41■□□□□ 0.86
RPL13A-201ENST00000391857 PHF14O94880 888 aa20.4■□□□□ 0.86
RPL13A-201ENST00000391857 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
RPL13A-201ENST00000391857 COG3Q96JB2 828 aa20.4■□□□□ 0.86
RPL13A-201ENST00000391857 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
RPL13A-201ENST00000391857 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
RPL13A-201ENST00000391857 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
RPL13A-201ENST00000391857 NMRK2Q9NPI5 230 aa20.38■□□□□ 0.85
RPL13A-201ENST00000391857 TATP17735 454 aaPredicted RBP20.37■□□□□ 0.85
RPL13A-201ENST00000391857 SSFA2P28290 1259 aa20.37■□□□□ 0.85
RPL13A-201ENST00000391857 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
RPL13A-201ENST00000391857 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
RPL13A-201ENST00000391857 C5P01031 1676 aa20.37■□□□□ 0.85
RPL13A-201ENST00000391857 KLRG1Q96E93 195 aa20.36■□□□□ 0.85
RPL13A-201ENST00000391857 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
RPL13A-201ENST00000391857 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
RPL13A-201ENST00000391857 CYP27B1O15528 508 aa20.35■□□□□ 0.85
RPL13A-201ENST00000391857 HTRA3P83110 453 aa20.35■□□□□ 0.85
RPL13A-201ENST00000391857 CICQ96RK0 1608 aaPredicted RBP20.35■□□□□ 0.85
RPL13A-201ENST00000391857 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
RPL13A-201ENST00000391857 PIGBQ92521 554 aa20.34■□□□□ 0.85
RPL13A-201ENST00000391857 CAPN15O75808 1086 aa20.33■□□□□ 0.85
RPL13A-201ENST00000391857 TGFB2P61812 414 aa20.33■□□□□ 0.85
RPL13A-201ENST00000391857 RRS1Q15050 365 aaKnown RBP20.33■□□□□ 0.85
RPL13A-201ENST00000391857 LINC00116Q8NCU8 138 aa20.33■□□□□ 0.85
RPL13A-201ENST00000391857 CARD11Q9BXL7 1154 aa20.33■□□□□ 0.85
RPL13A-201ENST00000391857 BCS1LQ9Y276 419 aa20.33■□□□□ 0.85
RPL13A-201ENST00000391857 NSD3Q9BZ95 1437 aa20.33■□□□□ 0.84
RPL13A-201ENST00000391857 C4BP0C0L5 1744 aa20.33■□□□□ 0.84
RPL13A-201ENST00000391857 MMP10P09238 476 aa20.32■□□□□ 0.84
RPL13A-201ENST00000391857 ARHGAP27Q6ZUM4 889 aa20.32■□□□□ 0.84
RPL13A-201ENST00000391857 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
RPL13A-201ENST00000391857 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 TOGARAM1Q9Y4F4 1720 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 A0A0G2JLW4 131 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 RGPD2P0DJD1 1756 aa20.31■□□□□ 0.84
RPL13A-201ENST00000391857 LOC102724428A0A0B4J2F2 783 aa20.3■□□□□ 0.84
RPL13A-201ENST00000391857 SIK1P57059 783 aa20.3■□□□□ 0.84
RPL13A-201ENST00000391857 PRELPP51888 382 aa20.29■□□□□ 0.84
RPL13A-201ENST00000391857 TNS4Q8IZW8 715 aa20.29■□□□□ 0.84
RPL13A-201ENST00000391857 GNPATO15228 680 aa20.28■□□□□ 0.84
RPL13A-201ENST00000391857 FSTL1Q12841 308 aa20.28■□□□□ 0.84
RPL13A-201ENST00000391857 ITPK1Q13572 414 aa20.28■□□□□ 0.84
RPL13A-201ENST00000391857 NKX1-1Q15270 411 aaPredicted RBP20.28■□□□□ 0.84
RPL13A-201ENST00000391857 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
RPL13A-201ENST00000391857 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
RPL13A-201ENST00000391857 DPEP1P16444 411 aa20.26■□□□□ 0.83
RPL13A-201ENST00000391857 C9orf131Q5VYM1 1079 aa20.26■□□□□ 0.83
RPL13A-201ENST00000391857 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
RPL13A-201ENST00000391857 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
RPL13A-201ENST00000391857 INSRP06213 1382 aa20.25■□□□□ 0.83
RPL13A-201ENST00000391857 FYB1O15117 783 aa20.25■□□□□ 0.83
RPL13A-201ENST00000391857 FCHSD2O94868 740 aa20.25■□□□□ 0.83
RPL13A-201ENST00000391857 NLGN1Q8N2Q7 840 aa20.24■□□□□ 0.83
RPL13A-201ENST00000391857 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
RPL13A-201ENST00000391857 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
RPL13A-201ENST00000391857 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms