RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 HOXB4P17483 251 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 PTGIRP43119 386 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 DOC2BQ14184 412 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 DIXDC1Q155Q3 683 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 INTS6LQ5JSJ4 861 aaKnown RBP3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 C1orf229Q6ZS94 237 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 PRICKLE2Q7Z3G6 844 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 KDF1Q8NAX2 398 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 SLC10A4Q96EP9 437 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 RRAGCQ9HB90 399 aa3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 GDF2Q9UK05 429 aaPredicted RBP3.49□□□□□ -1.85
RNU6-1239P-201ENST00000391310 RHOQP17081 205 aa3.48□□□□□ -1.85
RNU6-1239P-201ENST00000391310 NBPF11Q86T75 865 aa3.48□□□□□ -1.85
RNU6-1239P-201ENST00000391310 EDARADDQ8WWZ3 215 aa3.48□□□□□ -1.85
RNU6-1239P-201ENST00000391310 TBC1D2Q9BYX2 928 aa3.48□□□□□ -1.85
RNU6-1239P-201ENST00000391310 LILRA1O75019 489 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 GPC1P35052 558 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 PDXDC2PQ6P474 469 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 GOLGA6L1Q8N7Z2 621 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 ZNF784Q8NCA9 323 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 KLRG1Q96E93 195 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 CFHR5Q9BXR6 569 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 NOP53Q9NZM5 478 aaKnown RBP3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 KDM2AQ9Y2K7 1162 aa3.47□□□□□ -1.85
RNU6-1239P-201ENST00000391310 ADD1P35611 737 aaKnown RBP3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 RSPO4Q2I0M5 234 aaPredicted RBP3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NKAPLQ5M9Q1 402 aa3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 CABLES1Q8TDN4 633 aa3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ARHGAP9Q9BRR9 750 aa3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 BEGAINQ9BUH8 593 aa3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TMPRSS4Q9NRS4 437 aa3.46□□□□□ -1.86
RNU6-1239P-201ENST00000391310 AMPD1P23109 780 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GATA4P43694 442 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 DGKGP49619 791 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TTLL12Q14166 644 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NBPF20Q3BBV1 942 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 WDR44Q5JSH3 913 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 SLCO4C1Q6ZQN7 724 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TSC1Q92574 1164 aa3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GAS2L1Q99501 681 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NUCKS1Q9H1E3 243 aaKnown RBP3.45□□□□□ -1.86
RNU6-1239P-201ENST00000391310 F11P03951 625 aa3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GIGYF2Q6Y7W6 1299 aaKnown RBP3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 RIC3Q7Z5B4 369 aa3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ZBTB33Q86T24 672 aa3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 HELBQ8NG08 1087 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 PHF24Q9UPV7 400 aa3.44□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ERVH48-1M5A8F1 160 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 DYRK3O43781 588 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 EPXP11678 715 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 POU4F2Q12837 409 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 AMHR2Q16671 573 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NBPF10Q6P3W6 841 aaKnown RBP3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NBPF15Q8N660 670 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TRIM52Q96A61 297 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 BTBD6Q96KE9 485 aa3.43□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NUTM2BA6NNL0 878 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NUTM2EB1AL46 878 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 SPATA31C2B4DYI2 1134 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 LILRB3O75022 631 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 COBLO75128 1261 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 THBS1P07996 1170 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 SPATA31C1P0DKV0 1188 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 LRP8Q14114 963 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 QPCTQ16769 361 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TUSC1Q2TAM9 212 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NUTM2DQ5VT03 806 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 NUTM2AQ8IVF1 878 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 OCSTAMPQ9BR26 566 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 FKBPLQ9UIM3 349 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GGA1Q9UJY5 639 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GPSM3Q9Y4H4 160 aa3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ZC3H4Q9UPT8 1303 aaKnown RBP3.42□□□□□ -1.86
RNU6-1239P-201ENST00000391310 A0A1W2PRU2 124 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ATP5J2-PTCD1G3V325 749 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 MEN1O00255 615 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TULP1O00294 542 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 CSPP1Q1MSJ5 1256 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 PRSS36Q5K4E3 855 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ADAM32Q8TC27 787 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 GRIP2Q9C0E4 1043 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TIMMDC1Q9NPL8 285 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 TPSG1Q9NRR2 321 aa3.41□□□□□ -1.86
RNU6-1239P-201ENST00000391310 ESPNB1AK53 854 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 C2CD2LO14523 706 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 BMP4P12644 408 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 YBX3P16989 372 aaKnown RBP eCLIP3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 RAB15P59190 212 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 PTK2Q05397 1052 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 UBAP2LQ14157 1087 aaKnown RBP3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 LBRQ14739 615 aaKnown RBP3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 SLC27A3Q5K4L6 730 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 TAS1R3Q7RTX0 852 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 RNF135Q8IUD6 432 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 SEPT12Q8IYM1 358 aa3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ATXN7L1Q9ULK2 861 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1239P-201ENST00000391310 ARID1BQ8NFD5 2236 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 WASLO00401 505 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1239P-201ENST00000391310 HYAL3O43820 417 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms