RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 PTPN23Q9H3S7 1636 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 NLRP6P59044 892 aa10.21□□□□□ -0.77
PKP4-202ENST00000389759 HS1BP3Q53T59 392 aa10.21□□□□□ -0.77
PKP4-202ENST00000389759 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.77
PKP4-202ENST00000389759 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.78
PKP4-202ENST00000389759 KRT32Q14532 448 aa10.21□□□□□ -0.78
PKP4-202ENST00000389759 GRIN2BQ13224 1484 aa10.21□□□□□ -0.78
PKP4-202ENST00000389759 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.78
PKP4-202ENST00000389759 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.78
PKP4-202ENST00000389759 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 HCLS1P14317 486 aaPredicted RBP10.2□□□□□ -0.78
PKP4-202ENST00000389759 VPS53Q5VIR6 699 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 ATAD2Q6PL18 1390 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 SMTNL1A8MU46 457 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 SEC24BO95487 1268 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 PIP4K2AP48426 406 aaPredicted RBP10.2□□□□□ -0.78
PKP4-202ENST00000389759 DCTN1Q14203 1278 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
PKP4-202ENST00000389759 NUCB1Q02818 461 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 NOLC1Q14978 699 aaKnown RBP eCLIP10.2□□□□□ -0.78
PKP4-202ENST00000389759 DACH1Q9UI36 760 aa10.2□□□□□ -0.78
PKP4-202ENST00000389759 NEMFO60524 1076 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 CKAP2LQ8IYA6 745 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 PARD3Q8TEW0 1356 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 GLRX3O76003 335 aaKnown RBP10.19□□□□□ -0.78
PKP4-202ENST00000389759 RAB3GAP1Q15042 981 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 CFAP100Q494V2 611 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 RNF123Q5XPI4 1314 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 UBE2HP62256 183 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
PKP4-202ENST00000389759 AACSQ86V21 672 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 KIF1BPQ96EK5 621 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 DEF6Q9H4E7 631 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 DISP3Q9P2K9 1392 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 CCDC102AQ96A19 550 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 DDX11Q96FC9 970 aa10.19□□□□□ -0.78
PKP4-202ENST00000389759 DDX19AQ9NUU7 478 aaKnown RBP10.19□□□□□ -0.78
PKP4-202ENST00000389759 URI1O94763 535 aaPredicted RBP10.18□□□□□ -0.78
PKP4-202ENST00000389759 KIAA0754O94854 1291 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 USP8P40818 1118 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 PRIM1P49642 420 aaKnown RBP10.18□□□□□ -0.78
PKP4-202ENST00000389759 CCDC191Q8NCU4 936 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 RAPGEF4Q8WZA2 1011 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 STX6O43752 255 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 PRPF40BQ6NWY9 871 aaKnown RBP10.18□□□□□ -0.78
PKP4-202ENST00000389759 SIL1Q9H173 461 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 TRMT1Q9NXH9 659 aaKnown RBP10.18□□□□□ -0.78
PKP4-202ENST00000389759 ZNHIT6Q9NWK9 470 aaKnown RBP10.18□□□□□ -0.78
PKP4-202ENST00000389759 MRC2Q9UBG0 1479 aa10.18□□□□□ -0.78
PKP4-202ENST00000389759 RAB11FIP3O75154 756 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 ZNF165P49910 485 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 OSCARQ8IYS5 282 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
PKP4-202ENST00000389759 PTPRKQ15262 1439 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 PSME1Q06323 249 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 NUTM2GQ5VZR2 741 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 TMX3Q96JJ7 454 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 ZNF830Q96NB3 372 aaPredicted RBP10.17□□□□□ -0.78
PKP4-202ENST00000389759 ZSCAN12O43309 604 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
PKP4-202ENST00000389759 RRS1Q15050 365 aaKnown RBP10.17□□□□□ -0.78
PKP4-202ENST00000389759 ARHGAP29Q52LW3 1261 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 AMOTL1Q8IY63 956 aa10.17□□□□□ -0.78
PKP4-202ENST00000389759 CTAGE5O15320 804 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 TRERF1Q96PN7 1200 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 GBP3Q9H0R5 595 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 LAMC3Q9Y6N6 1575 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 POLR3GO15318 223 aaPredicted RBP10.16□□□□□ -0.78
PKP4-202ENST00000389759 CALRP27797 417 aaKnown RBP10.16□□□□□ -0.78
PKP4-202ENST00000389759 TTC12Q9H892 705 aaPredicted RBP10.16□□□□□ -0.78
PKP4-202ENST00000389759 MAGEC2Q9UBF1 373 aaPredicted RBP10.16□□□□□ -0.78
PKP4-202ENST00000389759 RPGRIP1LQ68CZ1 1315 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
PKP4-202ENST00000389759 CAVIN2O95810 425 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 GTF2F1P35269 517 aaKnown RBP eCLIP10.15□□□□□ -0.782e-13■■■□□ 16.7
PKP4-202ENST00000389759 TXLNAP40222 546 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 GSDMDP57764 484 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 GIMAP6Q6P9H5 292 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 DDX54Q8TDD1 881 aaKnown RBP10.15□□□□□ -0.78
PKP4-202ENST00000389759 PEG3Q9GZU2 1588 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
PKP4-202ENST00000389759 KRT222Q8N1A0 295 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
PKP4-202ENST00000389759 IL16Q14005 1332 aa10.15□□□□□ -0.78
PKP4-202ENST00000389759 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.79
PKP4-202ENST00000389759 RLBP1P12271 317 aa10.15□□□□□ -0.79
PKP4-202ENST00000389759 VPS37DQ86XT2 251 aa10.15□□□□□ -0.79
PKP4-202ENST00000389759 CCDC94Q9BW85 323 aaPredicted RBP10.15□□□□□ -0.79
PKP4-202ENST00000389759 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms