RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
PTPRN2-202ENST00000389416 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
PTPRN2-202ENST00000389416 EYA1Q99502 592 aa15.9■□□□□ 0.14
PTPRN2-202ENST00000389416 CEP126Q9P2H0 1117 aa15.89■□□□□ 0.14
PTPRN2-202ENST00000389416 TBC1D2BQ9UPU7 963 aa15.89■□□□□ 0.14
PTPRN2-202ENST00000389416 SLC39A6Q13433 755 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 AACSQ86V21 672 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 TRIM34Q9BYJ4 488 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 ZBTB3Q9H5J0 574 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 FLT4P35916 1363 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 RALYLQ86SE5 291 aaKnown RBP15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 SKAP1Q86WV1 359 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 CCDC158Q5M9N0 1113 aa15.89■□□□□ 0.13
PTPRN2-202ENST00000389416 MLH3Q9UHC1 1453 aa15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 MTHFSDQ2M296 383 aaKnown RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 ZCRB1Q8TBF4 217 aaKnown RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 KDM6BO15054 1643 aa15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 POLR3AO14802 1390 aaPredicted RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 C8orf37Q96NL8 207 aa15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 NFXL1Q6ZNB6 911 aa15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 DRC7Q8IY82 874 aa15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 COL17A1Q9UMD9 1497 aaPredicted RBP15.88■□□□□ 0.13
PTPRN2-202ENST00000389416 PTMSP20962 102 aa15.87■□□□□ 0.13
PTPRN2-202ENST00000389416 TTC39AQ5SRH9 613 aa15.87■□□□□ 0.13
PTPRN2-202ENST00000389416 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 GOLGA6L6A8MZA4 724 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 GPTP24298 496 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 PLEKHH1Q9ULM0 1364 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 TRPM2O94759 1503 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
PTPRN2-202ENST00000389416 MARCH6O60337 910 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.133e-6■■■■□ 19.7
PTPRN2-202ENST00000389416 LMTK3Q96Q04 1460 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 NRDCO43847 1150 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 HOXC9P31274 260 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 VPS53Q5VIR6 699 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 SMARCA5O60264 1052 aaPredicted RBP15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 CLSTN1O94985 981 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 CSPP1Q1MSJ5 1256 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 CHMP4CQ96CF2 233 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 DEKP35659 375 aaKnown RBP15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 C8orf58Q8NAV2 365 aa15.85■□□□□ 0.13
PTPRN2-202ENST00000389416 IL16Q14005 1332 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 A0A087WZG4 1122 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 VPS37CA5D8V6 355 aaPredicted RBP15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 NEK4P51957 841 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 FOSBP53539 338 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 DDX49Q9Y6V7 483 aaKnown RBP15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
PTPRN2-202ENST00000389416 ERICH2A1L162 156 aa15.83■□□□□ 0.13
PTPRN2-202ENST00000389416 ZPR1O75312 459 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 IP6K1Q92551 441 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 ATP6V1DQ9Y5K8 247 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 SNRPA1P09661 255 aaKnown RBP15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 MTMR7Q9Y216 660 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 MAP3K2Q9Y2U5 619 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
PTPRN2-202ENST00000389416 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 GNL3LQ9NVN8 582 aaKnown RBP15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 PREX2Q70Z35 1606 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 SAMD1Q6SPF0 538 aaPredicted RBP15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 NFATC2IPQ8NCF5 419 aa15.82■□□□□ 0.12
PTPRN2-202ENST00000389416 TRIM29Q14134 588 aa15.81■□□□□ 0.12
PTPRN2-202ENST00000389416 METP08581 1390 aa15.81■□□□□ 0.12
PTPRN2-202ENST00000389416 KIF1BPQ96EK5 621 aa15.81■□□□□ 0.12
PTPRN2-202ENST00000389416 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
PTPRN2-202ENST00000389416 CHPF2Q9P2E5 772 aa15.81■□□□□ 0.12
PTPRN2-202ENST00000389416 HIP1O00291 1037 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 IL2RBP14784 551 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 DDB1Q16531 1140 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 MAGI2Q86UL8 1455 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 METTL24Q5JXM2 366 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 CHMP5Q9NZZ3 219 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 PTPRCP08575 1304 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 UBE3BQ7Z3V4 1068 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 TSPYL6Q8N831 410 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
PTPRN2-202ENST00000389416 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms