RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
SEC13-203ENST00000383801 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
SEC13-203ENST00000383801 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
SEC13-203ENST00000383801 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
SEC13-203ENST00000383801 SLAIN2Q9P270 581 aa17.36■□□□□ 0.37
SEC13-203ENST00000383801 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
SEC13-203ENST00000383801 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
SEC13-203ENST00000383801 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
SEC13-203ENST00000383801 NBPF6Q5VWK0 638 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 BRINP3Q76B58 766 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 PANK1Q8TE04 598 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 NBPF4Q96M43 638 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 COG6Q9Y2V7 657 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 CPDO75976 1380 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
SEC13-203ENST00000383801 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.37
SEC13-203ENST00000383801 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.37
SEC13-203ENST00000383801 DCTN1Q14203 1278 aa17.33■□□□□ 0.37
SEC13-203ENST00000383801 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.37
SEC13-203ENST00000383801 MRPL50Q8N5N7 158 aaKnown RBP17.33■□□□□ 0.37
SEC13-203ENST00000383801 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.37
SEC13-203ENST00000383801 TRIM27P14373 513 aa17.32■□□□□ 0.36
SEC13-203ENST00000383801 MCM10Q7L590 875 aa17.32■□□□□ 0.36
SEC13-203ENST00000383801 LTV1Q96GA3 475 aaPredicted RBP17.32■□□□□ 0.36
SEC13-203ENST00000383801 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
SEC13-203ENST00000383801 LRRC37A3O60309 1634 aa17.32■□□□□ 0.36
SEC13-203ENST00000383801 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
SEC13-203ENST00000383801 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
SEC13-203ENST00000383801 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
SEC13-203ENST00000383801 FAM208AQ9UK61 1670 aaKnown RBP17.3■□□□□ 0.36
SEC13-203ENST00000383801 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
SEC13-203ENST00000383801 RLBP1P12271 317 aa17.3■□□□□ 0.36
SEC13-203ENST00000383801 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
SEC13-203ENST00000383801 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
SEC13-203ENST00000383801 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
SEC13-203ENST00000383801 ERBB3P21860 1342 aa17.29■□□□□ 0.36
SEC13-203ENST00000383801 CEMIPQ8WUJ3 1361 aa17.29■□□□□ 0.36
SEC13-203ENST00000383801 TSPYL6Q8N831 410 aa17.29■□□□□ 0.36
SEC13-203ENST00000383801 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
SEC13-203ENST00000383801 COL18A1P39060 1754 aa17.28■□□□□ 0.36
SEC13-203ENST00000383801 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
SEC13-203ENST00000383801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.364e-7■■■□□ 17.9
SEC13-203ENST00000383801 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
SEC13-203ENST00000383801 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.36
SEC13-203ENST00000383801 PTPRCP08575 1304 aa17.27■□□□□ 0.35
SEC13-203ENST00000383801 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
SEC13-203ENST00000383801 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
SEC13-203ENST00000383801 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
SEC13-203ENST00000383801 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
SEC13-203ENST00000383801 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
SEC13-203ENST00000383801 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
SEC13-203ENST00000383801 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
SEC13-203ENST00000383801 HOXB7P09629 217 aa17.24■□□□□ 0.35
SEC13-203ENST00000383801 ABCC4O15439 1325 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
SEC13-203ENST00000383801 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
SEC13-203ENST00000383801 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
SEC13-203ENST00000383801 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
SEC13-203ENST00000383801 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
SEC13-203ENST00000383801 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
SEC13-203ENST00000383801 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
SEC13-203ENST00000383801 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
SEC13-203ENST00000383801 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
SEC13-203ENST00000383801 IGHDP01880 384 aa17.2■□□□□ 0.34
SEC13-203ENST00000383801 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
SEC13-203ENST00000383801 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
SEC13-203ENST00000383801 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
SEC13-203ENST00000383801 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
SEC13-203ENST00000383801 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
SEC13-203ENST00000383801 TEFQ10587 303 aa17.19■□□□□ 0.34
SEC13-203ENST00000383801 INTS3Q68E01 1043 aaKnown RBP17.19■□□□□ 0.34
SEC13-203ENST00000383801 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
SEC13-203ENST00000383801 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
SEC13-203ENST00000383801 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
SEC13-203ENST00000383801 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
SEC13-203ENST00000383801 KDM3BQ7LBC6 1761 aa17.16■□□□□ 0.34
SEC13-203ENST00000383801 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
SEC13-203ENST00000383801 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
SEC13-203ENST00000383801 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
SEC13-203ENST00000383801 MIS18AQ9NYP9 233 aa17.16■□□□□ 0.34
SEC13-203ENST00000383801 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
SEC13-203ENST00000383801 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
SEC13-203ENST00000383801 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
SEC13-203ENST00000383801 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
SEC13-203ENST00000383801 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
SEC13-203ENST00000383801 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
SEC13-203ENST00000383801 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
SEC13-203ENST00000383801 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
SEC13-203ENST00000383801 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
SEC13-203ENST00000383801 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SEC13-203ENST00000383801 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
SEC13-203ENST00000383801 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
SEC13-203ENST00000383801 ABCA3Q99758 1704 aa17.13■□□□□ 0.33
SEC13-203ENST00000383801 LTBP4Q8N2S1 1624 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms