RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
RFX3-204ENST00000382004 ZWINTO95229 277 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 GNAI2P04899 355 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 MPHOSPH8Q99549 860 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 USP47Q96K76 1375 aa6.86□□□□□ -1.31
RFX3-204ENST00000382004 FERP16591 822 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.85□□□□□ -1.31
RFX3-204ENST00000382004 CAMK4Q16566 473 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 FEZ1Q99689 392 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 CDKL5O76039 1030 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 PABPN1LA6NDY0 278 aaKnown RBP6.85□□□□□ -1.31
RFX3-204ENST00000382004 KIF4BQ2VIQ3 1234 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 PPP4R3AQ6IN85 833 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 MICALCLQ6ZW33 695 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 PDZRN3Q9UPQ7 1066 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 KIF5CO60282 957 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 URI1O94763 535 aaPredicted RBP6.85□□□□□ -1.31
RFX3-204ENST00000382004 LIG1P18858 919 aa6.85□□□□□ -1.31
RFX3-204ENST00000382004 APBB1IPQ7Z5R6 666 aaPredicted RBP6.85□□□□□ -1.31
RFX3-204ENST00000382004 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
RFX3-204ENST00000382004 HLTFQ14527 1009 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFX3-204ENST00000382004 DRC1Q96MC2 740 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 MYL6BP14649 208 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 TNIP1Q15025 636 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 CCDC150Q8NCX0 1101 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 BLOC1S2Q6QNY1 142 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 TSG101Q99816 390 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 FKBP15Q5T1M5 1219 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 PLCD3Q8N3E9 789 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 CCDC160A6NGH7 325 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 PTPN14Q15678 1187 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 PDRG1Q9NUG6 133 aa6.84□□□□□ -1.31
RFX3-204ENST00000382004 JAKMIP1Q96N16 626 aaKnown RBP6.84□□□□□ -1.31
RFX3-204ENST00000382004 K7ELQ4 463 aaPredicted RBP6.84□□□□□ -1.32
RFX3-204ENST00000382004 ARL1P40616 181 aaPredicted RBP6.84□□□□□ -1.32
RFX3-204ENST00000382004 NLRP6P59044 892 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 CCDC96Q2M329 555 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 ZSCAN25Q6NSZ9 544 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 DAAM2Q86T65 1068 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 VPS36Q86VN1 386 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 TIGD1Q96MW7 591 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 SRRTQ9BXP5 876 aaKnown RBP6.84□□□□□ -1.32
RFX3-204ENST00000382004 CEP131Q9UPN4 1083 aa6.84□□□□□ -1.32
RFX3-204ENST00000382004 MRPS9P82933 396 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 PRPF4BQ13523 1007 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 WDR78Q5VTH9 848 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 TSNARE1Q96NA8 513 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 SSX2IPQ9Y2D8 614 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 C6orf163Q5TEZ5 329 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 CWC27Q6UX04 472 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 FSD2A1L4K1 749 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 MCM3P25205 808 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 PAFAH1B1P43034 410 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 LMAN1P49257 510 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 TDRD12Q587J7 1177 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 SEC63Q9UGP8 760 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 ATP2C2O75185 946 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 NOB1Q9ULX3 412 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 GIGYF2Q6Y7W6 1299 aaKnown RBP6.83□□□□□ -1.32
RFX3-204ENST00000382004 AACSQ86V21 672 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 ABTB2Q8N961 1025 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 FAM107BQ9H098 131 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 CABP2Q9NPB3 220 aa6.83□□□□□ -1.32
RFX3-204ENST00000382004 MAP3K11Q16584 847 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 SPTY2D1Q68D10 685 aaPredicted RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 TAOK3Q9H2K8 898 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 CABP4P57796 275 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 DDX54Q8TDD1 881 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 CTR9Q6PD62 1173 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 ZSCAN12O43309 604 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 RRP9O43818 475 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 SFPQP23246 707 aaKnown RBP eCLIP6.82□□□□□ -1.322e-6■■■□□ 15.1
RFX3-204ENST00000382004 GTF2F1P35269 517 aaKnown RBP eCLIP6.82□□□□□ -1.32
RFX3-204ENST00000382004 PLEKHO1Q53GL0 409 aaPredicted RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 MAATS1Q7Z4T9 603 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 RAB3IL1Q8TBN0 382 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 ZNF526Q8TF50 670 aaPredicted RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 CPLX3Q8WVH0 158 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 NUP88Q99567 741 aaPredicted RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 CGNQ9P2M7 1197 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 TRMT1LQ7Z2T5 733 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 WASF1Q92558 559 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 VPS8Q8N3P4 1428 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 KIF18AQ8NI77 898 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 SYCE3A1L190 88 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 CA8P35219 290 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 MXRA7P84157 204 aa6.82□□□□□ -1.32
RFX3-204ENST00000382004 TRMT1Q9NXH9 659 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
RFX3-204ENST00000382004 TOP1P11387 765 aaKnown RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
RFX3-204ENST00000382004 AAMPQ13685 434 aa6.81□□□□□ -1.32
RFX3-204ENST00000382004 SPECC1LQ69YQ0 1117 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms