RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
BRF1-203ENST00000379937 UTRNP46939 3433 aa19.45■□□□□ 0.7
BRF1-203ENST00000379937 CD2BP2O95400 341 aaKnown RBP19.45■□□□□ 0.7
BRF1-203ENST00000379937 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
BRF1-203ENST00000379937 CALD1Q05682 793 aaKnown RBP19.44■□□□□ 0.7
BRF1-203ENST00000379937 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
BRF1-203ENST00000379937 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
BRF1-203ENST00000379937 LRRC7Q96NW7 1537 aa19.43■□□□□ 0.7
BRF1-203ENST00000379937 ZC3H13Q5T200 1668 aaKnown RBP19.43■□□□□ 0.7
BRF1-203ENST00000379937 CCDC85AQ96PX6 553 aaPredicted RBP19.43■□□□□ 0.7
BRF1-203ENST00000379937 LRRFIP2Q9Y608 721 aaKnown RBP19.43■□□□□ 0.7
BRF1-203ENST00000379937 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
BRF1-203ENST00000379937 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
BRF1-203ENST00000379937 GNAT3A8MTJ3 354 aa19.42■□□□□ 0.7
BRF1-203ENST00000379937 TBC1D9Q6ZT07 1266 aa19.42■□□□□ 0.7
BRF1-203ENST00000379937 PNMA6EA0A0J9YXQ4 647 aa19.41■□□□□ 0.7
BRF1-203ENST00000379937 CHPF2Q9P2E5 772 aa19.41■□□□□ 0.7
BRF1-203ENST00000379937 CFAP74Q9C0B2 1584 aa19.41■□□□□ 0.7
BRF1-203ENST00000379937 API5Q9BZZ5 524 aaKnown RBP19.41■□□□□ 0.7
BRF1-203ENST00000379937 MSH6P52701 1360 aa19.41■□□□□ 0.7
BRF1-203ENST00000379937 FLIIQ13045 1269 aa19.4■□□□□ 0.7
BRF1-203ENST00000379937 HSCBQ8IWL3 235 aa19.4■□□□□ 0.7
BRF1-203ENST00000379937 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
BRF1-203ENST00000379937 KIAA1210Q9ULL0 1709 aa19.4■□□□□ 0.7
BRF1-203ENST00000379937 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
BRF1-203ENST00000379937 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
BRF1-203ENST00000379937 NLRP1Q9C000 1473 aa19.39■□□□□ 0.7
BRF1-203ENST00000379937 CWF19L2Q2TBE0 894 aaKnown RBP19.39■□□□□ 0.69
BRF1-203ENST00000379937 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.39■□□□□ 0.69
BRF1-203ENST00000379937 CHMP3Q9Y3E7 222 aa19.39■□□□□ 0.69
BRF1-203ENST00000379937 SETBP1Q9Y6X0 1596 aa19.39■□□□□ 0.69
BRF1-203ENST00000379937 PI4KAP2A4QPH2 592 aa19.39■□□□□ 0.69
BRF1-203ENST00000379937 PI4KAP1Q8N8J0 262 aa19.39■□□□□ 0.69
BRF1-203ENST00000379937 NUCB1Q02818 461 aa19.38■□□□□ 0.69
BRF1-203ENST00000379937 PROSER3Q2NL68 480 aa19.38■□□□□ 0.69
BRF1-203ENST00000379937 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
BRF1-203ENST00000379937 SURF6O75683 361 aaKnown RBP19.38■□□□□ 0.69
BRF1-203ENST00000379937 GCP02774 474 aa19.38■□□□□ 0.69
BRF1-203ENST00000379937 PUS7Q96PZ0 661 aaKnown RBP19.38■□□□□ 0.69
BRF1-203ENST00000379937 PA2G4Q9UQ80 394 aaKnown RBP19.38■□□□□ 0.69
BRF1-203ENST00000379937 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
BRF1-203ENST00000379937 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 CHL1O00533 1208 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 TBC1D32Q96NH3 1257 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 GSPT1P15170 499 aaKnown RBP19.37■□□□□ 0.69
BRF1-203ENST00000379937 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
BRF1-203ENST00000379937 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
BRF1-203ENST00000379937 ZFYVE9O95405 1425 aa19.36■□□□□ 0.69
BRF1-203ENST00000379937 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
BRF1-203ENST00000379937 SMC5Q8IY18 1101 aa19.36■□□□□ 0.69
BRF1-203ENST00000379937 NBPF7P0C2Y1 421 aaPredicted RBP19.36■□□□□ 0.69
BRF1-203ENST00000379937 ALDH1L2Q3SY69 923 aa19.36■□□□□ 0.69
BRF1-203ENST00000379937 FAM135BQ49AJ0 1406 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 C1orf141Q5JVX7 400 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 UPF3BQ9BZI7 483 aaKnown RBP19.35■□□□□ 0.69
BRF1-203ENST00000379937 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
BRF1-203ENST00000379937 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 PPFIA3O75145 1194 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 NINLQ9Y2I6 1382 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 ANKRD24Q8TF21 1146 aa19.35■□□□□ 0.69
BRF1-203ENST00000379937 USP6P35125 1406 aa19.34■□□□□ 0.69
BRF1-203ENST00000379937 GSE1Q14687 1217 aa19.34■□□□□ 0.69
BRF1-203ENST00000379937 CEP85Q6P2H3 762 aa19.34■□□□□ 0.69
BRF1-203ENST00000379937 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
BRF1-203ENST00000379937 ANO2Q9NQ90 1003 aa19.34■□□□□ 0.69
BRF1-203ENST00000379937 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
BRF1-203ENST00000379937 ATF3P18847 181 aa19.33■□□□□ 0.69
BRF1-203ENST00000379937 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.69
BRF1-203ENST00000379937 ATP5J2-PTCD1G3V325 749 aa19.33■□□□□ 0.69
BRF1-203ENST00000379937 ATP7BP35670 1465 aa19.33■□□□□ 0.68
BRF1-203ENST00000379937 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.68
BRF1-203ENST00000379937 GAS2L2Q8NHY3 880 aa19.33■□□□□ 0.68
BRF1-203ENST00000379937 SRGAP3O43295 1099 aa19.32■□□□□ 0.68
BRF1-203ENST00000379937 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
BRF1-203ENST00000379937 SDSP20132 328 aa19.31■□□□□ 0.68
BRF1-203ENST00000379937 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
BRF1-203ENST00000379937 COL3A1P02461 1466 aaPredicted RBP19.31■□□□□ 0.68
BRF1-203ENST00000379937 PLEKHM2Q8IWE5 1019 aa19.31■□□□□ 0.68
BRF1-203ENST00000379937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.31■□□□□ 0.68
BRF1-203ENST00000379937 FAM177BA6PVY3 158 aa19.31■□□□□ 0.68
BRF1-203ENST00000379937 UBTFL1P0CB47 393 aaPredicted RBP19.31■□□□□ 0.68
BRF1-203ENST00000379937 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
BRF1-203ENST00000379937 IL16Q14005 1332 aa19.3■□□□□ 0.68
BRF1-203ENST00000379937 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
BRF1-203ENST00000379937 FLT4P35916 1363 aa19.29■□□□□ 0.68
BRF1-203ENST00000379937 CPA1P15085 419 aa19.28■□□□□ 0.68
BRF1-203ENST00000379937 PKP1Q13835 747 aa19.28■□□□□ 0.68
BRF1-203ENST00000379937 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
BRF1-203ENST00000379937 GNAI2P04899 355 aa19.27■□□□□ 0.68
BRF1-203ENST00000379937 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
BRF1-203ENST00000379937 RAPGEF4Q8WZA2 1011 aa19.27■□□□□ 0.68
BRF1-203ENST00000379937 MPNDQ8N594 471 aa19.27■□□□□ 0.67
BRF1-203ENST00000379937 CT47B1P0C2W7 299 aaPredicted RBP19.26■□□□□ 0.67
BRF1-203ENST00000379937 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
BRF1-203ENST00000379937 CCDC8Q9H0W5 538 aaPredicted RBP19.25■□□□□ 0.67
BRF1-203ENST00000379937 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms