RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 MEGF6O75095 1541 aa33.93■■■■□ 3.02
TNFRSF4-201ENST00000379236 DOT1LQ8TEK3 1739 aa33.93■■■■□ 3.02
TNFRSF4-201ENST00000379236 ZCRB1Q8TBF4 217 aaKnown RBP33.92■■■■□ 3.02
TNFRSF4-201ENST00000379236 PANK3Q9H999 370 aa33.92■■■■□ 3.02
TNFRSF4-201ENST00000379236 TATP17735 454 aaPredicted RBP33.89■■■■□ 3.02
TNFRSF4-201ENST00000379236 TXNRD1Q16881 649 aa33.88■■■■□ 3.01
TNFRSF4-201ENST00000379236 TNNT2P45379 298 aaPredicted RBP33.86■■■■□ 3.01
TNFRSF4-201ENST00000379236 NSD2O96028 1365 aa33.85■■■■□ 3.01
TNFRSF4-201ENST00000379236 SYTL4Q96C24 671 aaPredicted RBP33.84■■■■□ 3.01
TNFRSF4-201ENST00000379236 PROM2Q8N271 834 aa33.83■■■■□ 3.01
TNFRSF4-201ENST00000379236 STK32BQ9NY57 414 aa33.82■■■■□ 3
TNFRSF4-201ENST00000379236 WASHC2AQ641Q2 1341 aa33.81■■■■□ 3
TNFRSF4-201ENST00000379236 ANO8Q9HCE9 1232 aaPredicted RBP33.81■■■■□ 3
TNFRSF4-201ENST00000379236 POLKQ9UBT6 870 aa33.8■■■■□ 3
TNFRSF4-201ENST00000379236 KNSTRNQ9Y448 316 aa33.8■■■■□ 3
TNFRSF4-201ENST00000379236 PCDH11XQ9BZA7 1347 aa33.79■■■■□ 3
TNFRSF4-201ENST00000379236 PCDH11YQ9BZA8 1340 aa33.79■■■■□ 3
TNFRSF4-201ENST00000379236 PKD1L3Q7Z443 1732 aa33.78■■■■□ 3
TNFRSF4-201ENST00000379236 CASZ1Q86V15 1759 aa33.77■■■■□ 3
TNFRSF4-201ENST00000379236 KIF7Q2M1P5 1343 aa33.76■■■□□ 2.99
TNFRSF4-201ENST00000379236 PRIM1P49642 420 aaKnown RBP33.75■■■□□ 2.99
TNFRSF4-201ENST00000379236 MORC1Q86VD1 984 aa33.75■■■□□ 2.99
TNFRSF4-201ENST00000379236 SPON1Q9HCB6 807 aa33.75■■■□□ 2.99
TNFRSF4-201ENST00000379236 SLC15A2Q16348 729 aa33.72■■■□□ 2.99
TNFRSF4-201ENST00000379236 LY75O60449 1722 aa33.72■■■□□ 2.99
TNFRSF4-201ENST00000379236 PPP1R1BQ9UD71 204 aaPredicted RBP33.71■■■□□ 2.99
TNFRSF4-201ENST00000379236 PAPPAQ13219 1627 aa33.71■■■□□ 2.99
TNFRSF4-201ENST00000379236 NCAPD2Q15021 1401 aa33.7■■■□□ 2.99
TNFRSF4-201ENST00000379236 EYA1Q99502 592 aa33.7■■■□□ 2.99
TNFRSF4-201ENST00000379236 SLC27A3Q5K4L6 730 aa33.68■■■□□ 2.98
TNFRSF4-201ENST00000379236 SPG7Q9UQ90 795 aa33.68■■■□□ 2.98
TNFRSF4-201ENST00000379236 ITGB4P16144 1822 aa33.67■■■□□ 2.98
TNFRSF4-201ENST00000379236 EIF4A2Q14240 407 aaKnown RBP33.67■■■□□ 2.98
TNFRSF4-201ENST00000379236 TOGARAM1Q9Y4F4 1720 aa33.63■■■□□ 2.97
TNFRSF4-201ENST00000379236 LRRC4BQ9NT99 713 aa33.62■■■□□ 2.97
TNFRSF4-201ENST00000379236 QSER1Q2KHR3 1735 aa33.62■■■□□ 2.97
TNFRSF4-201ENST00000379236 CYP27B1O15528 508 aa33.61■■■□□ 2.97
TNFRSF4-201ENST00000379236 ZBTB7AO95365 584 aa33.61■■■□□ 2.97
TNFRSF4-201ENST00000379236 PDGFDQ9GZP0 370 aaPredicted RBP33.6■■■□□ 2.97
TNFRSF4-201ENST00000379236 MPRIPQ6WCQ1 1025 aa33.58■■■□□ 2.97
TNFRSF4-201ENST00000379236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.58■■■□□ 2.97
TNFRSF4-201ENST00000379236 CCNL1Q9UK58 526 aaPredicted RBP33.58■■■□□ 2.97
TNFRSF4-201ENST00000379236 AMER1Q5JTC6 1135 aaPredicted RBP33.57■■■□□ 2.96
TNFRSF4-201ENST00000379236 TUBGCP6Q96RT7 1819 aa33.57■■■□□ 2.96
TNFRSF4-201ENST00000379236 IGSF1Q8N6C5 1336 aa33.56■■■□□ 2.96
TNFRSF4-201ENST00000379236 ZNF827Q17R98 1081 aa33.56■■■□□ 2.96
TNFRSF4-201ENST00000379236 ATF5Q9Y2D1 282 aaPredicted RBP33.55■■■□□ 2.96
TNFRSF4-201ENST00000379236 KCNQ4P56696 695 aa33.54■■■□□ 2.96
TNFRSF4-201ENST00000379236 IFNL2Q8IZJ0 200 aa33.54■■■□□ 2.96
TNFRSF4-201ENST00000379236 PLEKHG2Q9H7P9 1386 aa33.54■■■□□ 2.96
TNFRSF4-201ENST00000379236 C5P01031 1676 aa33.54■■■□□ 2.96
TNFRSF4-201ENST00000379236 MTFR1LQ9H019 292 aa33.53■■■□□ 2.96
TNFRSF4-201ENST00000379236 NKX1-1Q15270 411 aaPredicted RBP33.51■■■□□ 2.95
TNFRSF4-201ENST00000379236 AKT1S1Q96B36 256 aa33.51■■■□□ 2.95
TNFRSF4-201ENST00000379236 TFCP2L1Q9NZI6 479 aa33.51■■■□□ 2.95
TNFRSF4-201ENST00000379236 TAF1LQ8IZX4 1826 aa33.51■■■□□ 2.95
TNFRSF4-201ENST00000379236 PALLDQ8WX93 1383 aa33.5■■■□□ 2.95
TNFRSF4-201ENST00000379236 HMGB2P26583 209 aaKnown RBP33.5■■■□□ 2.95
TNFRSF4-201ENST00000379236 CC2D1BQ5T0F9 858 aaKnown RBP33.5■■■□□ 2.95
TNFRSF4-201ENST00000379236 PHKG2P15735 406 aa33.49■■■□□ 2.95
TNFRSF4-201ENST00000379236 SMARCC1Q92922 1105 aaPredicted RBP33.49■■■□□ 2.95
TNFRSF4-201ENST00000379236 PLEKHO1Q53GL0 409 aaPredicted RBP33.47■■■□□ 2.95
TNFRSF4-201ENST00000379236 TMOD3Q9NYL9 352 aa33.47■■■□□ 2.95
TNFRSF4-201ENST00000379236 PER1O15534 1290 aaPredicted RBP33.45■■■□□ 2.95
TNFRSF4-201ENST00000379236 CNGB1Q14028 1251 aaPredicted RBP33.45■■■□□ 2.95
TNFRSF4-201ENST00000379236 DCAF8L1A6NGE4 600 aa33.44■■■□□ 2.94
TNFRSF4-201ENST00000379236 PTGER2P43116 358 aa33.43■■■□□ 2.94
TNFRSF4-201ENST00000379236 MTHFSP49914 203 aa33.43■■■□□ 2.94
TNFRSF4-201ENST00000379236 AMOTQ4VCS5 1084 aa33.43■■■□□ 2.94
TNFRSF4-201ENST00000379236 PIGBQ92521 554 aa33.43■■■□□ 2.94
TNFRSF4-201ENST00000379236 HSP90AB1P08238 724 aaKnown RBP33.42■■■□□ 2.94
TNFRSF4-201ENST00000379236 SULT6B1Q6IMI4 303 aa33.42■■■□□ 2.94
TNFRSF4-201ENST00000379236 PNPLA7Q6ZV29 1317 aa33.42■■■□□ 2.94
TNFRSF4-201ENST00000379236 ZNF530Q6P9A1 599 aaPredicted RBP33.41■■■□□ 2.94
TNFRSF4-201ENST00000379236 AEBP1Q8IUX7 1158 aa33.41■■■□□ 2.94
TNFRSF4-201ENST00000379236 SLC16A10Q8TF71 515 aa33.41■■■□□ 2.94
TNFRSF4-201ENST00000379236 MSH5O43196 834 aa33.4■■■□□ 2.94
TNFRSF4-201ENST00000379236 IL13P35225 146 aa33.4■■■□□ 2.94
TNFRSF4-201ENST00000379236 C1orf141Q5JVX7 400 aa33.39■■■□□ 2.94
TNFRSF4-201ENST00000379236 NPC1L1Q9UHC9 1359 aa33.38■■■□□ 2.93
TNFRSF4-201ENST00000379236 C4BP0C0L5 1744 aa33.38■■■□□ 2.93
TNFRSF4-201ENST00000379236 DCAF5Q96JK2 942 aa33.36■■■□□ 2.93
TNFRSF4-201ENST00000379236 POLD1P28340 1107 aa33.35■■■□□ 2.93
TNFRSF4-201ENST00000379236 ARXQ96QS3 562 aa33.35■■■□□ 2.93
TNFRSF4-201ENST00000379236 KDRP35968 1356 aa33.34■■■□□ 2.93
TNFRSF4-201ENST00000379236 COL24A1Q17RW2 1714 aa33.33■■■□□ 2.93
TNFRSF4-201ENST00000379236 ERVV-2B6SEH9 535 aa33.33■■■□□ 2.93
TNFRSF4-201ENST00000379236 AK7Q96M32 723 aa33.33■■■□□ 2.93
TNFRSF4-201ENST00000379236 SGIP1Q9BQI5 828 aa33.33■■■□□ 2.93
TNFRSF4-201ENST00000379236 DIAPH1O60610 1272 aaKnown RBP33.32■■■□□ 2.92
TNFRSF4-201ENST00000379236 VIRMAQ69YN4 1812 aaKnown RBP33.32■■■□□ 2.92
TNFRSF4-201ENST00000379236 LOC102724428A0A0B4J2F2 783 aa33.31■■■□□ 2.92
TNFRSF4-201ENST00000379236 SIK1P57059 783 aa33.31■■■□□ 2.92
TNFRSF4-201ENST00000379236 FHDC1Q9C0D6 1143 aaPredicted RBP33.31■■■□□ 2.92
TNFRSF4-201ENST00000379236 ASAP1Q9ULH1 1129 aa33.31■■■□□ 2.92
TNFRSF4-201ENST00000379236 SCN11AQ9UI33 1791 aa33.3■■■□□ 2.92
TNFRSF4-201ENST00000379236 FLAD1Q8NFF5 587 aa33.3■■■□□ 2.92
TNFRSF4-201ENST00000379236 UBR3Q6ZT12 1888 aa33.3■■■□□ 2.92
TNFRSF4-201ENST00000379236 CABP4P57796 275 aa33.29■■■□□ 2.92
TNFRSF4-201ENST00000379236 HMOX1P09601 288 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms