RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
RAD50-201ENST00000378823 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
RAD50-201ENST00000378823 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
RAD50-201ENST00000378823 TDO2P48775 406 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.316e-6■■■■□ 21.9
RAD50-201ENST00000378823 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
RAD50-201ENST00000378823 PPP6R1Q9UPN7 881 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
RAD50-201ENST00000378823 AACSQ86V21 672 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 KIF18AQ8NI77 898 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 BCAR3O75815 825 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
RAD50-201ENST00000378823 MCM4P33991 863 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 TAF4BQ92750 862 aa13.13□□□□□ -0.31
RAD50-201ENST00000378823 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
RAD50-201ENST00000378823 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
RAD50-201ENST00000378823 SYCE3A1L190 88 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAD50-201ENST00000378823 MYL6BP14649 208 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAD50-201ENST00000378823 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
RAD50-201ENST00000378823 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 CETN2P41208 172 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
RAD50-201ENST00000378823 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 CASQ1P31415 396 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 DHX37Q8IY37 1157 aaKnown RBP13.11□□□□□ -0.31
RAD50-201ENST00000378823 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
RAD50-201ENST00000378823 KIF5CO60282 957 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 CABP4P57796 275 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 ZSCAN30Q86W11 494 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
RAD50-201ENST00000378823 SSR1P43307 286 aaKnown RBP13.11□□□□□ -0.31
RAD50-201ENST00000378823 SPA17Q15506 151 aa13.11□□□□□ -0.31
RAD50-201ENST00000378823 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
RAD50-201ENST00000378823 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
RAD50-201ENST00000378823 NEBLO76041 1014 aa13.1□□□□□ -0.31
RAD50-201ENST00000378823 ZNF76P36508 570 aa13.1□□□□□ -0.31
RAD50-201ENST00000378823 ESCO1Q5FWF5 840 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
RAD50-201ENST00000378823 ANAPC15P60006 121 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 DDX11Q96FC9 970 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 GIMAP7Q8NHV1 300 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 DNAI2Q9GZS0 605 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
RAD50-201ENST00000378823 WDR97A6NE52 1622 aa13.08□□□□□ -0.31
RAD50-201ENST00000378823 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.31
RAD50-201ENST00000378823 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
RAD50-201ENST00000378823 ZNF644Q9H582 1327 aaPredicted RBP13.08□□□□□ -0.32
RAD50-201ENST00000378823 SEC63Q9UGP8 760 aaKnown RBP13.08□□□□□ -0.32
RAD50-201ENST00000378823 LRP2BPQ9P2M1 347 aa13.08□□□□□ -0.32
RAD50-201ENST00000378823 CAMK4Q16566 473 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 PRAM1Q96QH2 718 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
RAD50-201ENST00000378823 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
RAD50-201ENST00000378823 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 STRN4Q9NRL3 753 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
RAD50-201ENST00000378823 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 NF2P35240 595 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 FKBP15Q5T1M5 1219 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
RAD50-201ENST00000378823 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 CCDC97Q96F63 343 aaPredicted RBP13.06□□□□□ -0.32
RAD50-201ENST00000378823 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
RAD50-201ENST00000378823 STAMBPO95630 424 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 FAM107BQ9H098 131 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 IFFO1Q0D2I5 559 aa13.06□□□□□ -0.32
RAD50-201ENST00000378823 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 SCAND2PQ9GZW5 306 aaPredicted RBP13.05□□□□□ -0.32
RAD50-201ENST00000378823 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
RAD50-201ENST00000378823 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
RAD50-201ENST00000378823 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 PHF23Q9BUL5 403 aaPredicted RBP13.05□□□□□ -0.32
RAD50-201ENST00000378823 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
RAD50-201ENST00000378823 GSTTP1A0A1W2PQM5 241 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 CTAGE5O15320 804 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms