RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
DEPDC4-202ENST00000378244 BRWD3Q6RI45 1802 aa15.68■□□□□ 0.1
DEPDC4-202ENST00000378244 OVOS2A0A0G2JMS6 1433 aa15.66■□□□□ 0.1
DEPDC4-202ENST00000378244 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 SPG7Q9UQ90 795 aa15.65■□□□□ 0.1
DEPDC4-202ENST00000378244 NCAPD2Q15021 1401 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 KDRP35968 1356 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 CYP27B1O15528 508 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
DEPDC4-202ENST00000378244 TRIM37O94972 964 aa15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 FAM196AQ6ZSG2 479 aa15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
DEPDC4-202ENST00000378244 WDR43Q15061 677 aaKnown RBP eCLIP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PLEKHO1Q53GL0 409 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 SYTL4Q96C24 671 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 ZNF530Q6P9A1 599 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 RGPD1P0DJD0 1748 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
DEPDC4-202ENST00000378244 KCNQ2O43526 872 aa15.61■□□□□ 0.09
DEPDC4-202ENST00000378244 FCHSD2O94868 740 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 UPF1Q92900 1129 aaKnown RBP eCLIP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.09
DEPDC4-202ENST00000378244 KAT6BQ8WYB5 2073 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 SENP3-EIF4A1A0A087X0R7 540 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 PHKG2P15735 406 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
DEPDC4-202ENST00000378244 SOCS7O14512 581 aa15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 PRIM1P49642 420 aaKnown RBP15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 MIER1Q8N108 512 aa15.58■□□□□ 0.08
DEPDC4-202ENST00000378244 NEFMP07197 916 aa15.57■□□□□ 0.08
DEPDC4-202ENST00000378244 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
DEPDC4-202ENST00000378244 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
DEPDC4-202ENST00000378244 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
DEPDC4-202ENST00000378244 APBA3O96018 575 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 MAPK8IP3Q9UPT6 1336 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
DEPDC4-202ENST00000378244 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 SHANK3Q9BYB0 1731 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 RRP7AQ9Y3A4 280 aaKnown RBP15.54■□□□□ 0.08
DEPDC4-202ENST00000378244 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 PKD1L3Q7Z443 1732 aa15.53■□□□□ 0.08
DEPDC4-202ENST00000378244 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
DEPDC4-202ENST00000378244 DCAF5Q96JK2 942 aa15.52■□□□□ 0.08
DEPDC4-202ENST00000378244 NKX1-1Q15270 411 aaPredicted RBP15.52■□□□□ 0.07
DEPDC4-202ENST00000378244 PNNQ9H307 717 aaKnown RBP15.52■□□□□ 0.07
DEPDC4-202ENST00000378244 GNAT3A8MTJ3 354 aa15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 DCTN1Q14203 1278 aa15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
DEPDC4-202ENST00000378244 CABP4P57796 275 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 MCM10Q7L590 875 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 CCDC125Q86Z20 511 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 NFATC2IPQ8NCF5 419 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 BAG6P46379 1132 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 PIGBQ92521 554 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 RUNDC1Q96C34 613 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 BCL9O00512 1426 aa15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
DEPDC4-202ENST00000378244 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 MAP3K5Q99683 1374 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 APAF1O14727 1248 aa15.49■□□□□ 0.07
DEPDC4-202ENST00000378244 RNMTO43148 476 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 RIPK4P57078 832 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 EZH2Q15910 746 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 NFE2L2Q16236 605 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 KCNQ4P56696 695 aa15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 THUMPD2Q9BTF0 503 aaKnown RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 SALL2Q9Y467 1007 aaPredicted RBP15.48■□□□□ 0.07
DEPDC4-202ENST00000378244 DOT1LQ8TEK3 1739 aa15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 SRCAPQ6ZRS2 3230 aa15.47■□□□□ 0.07
DEPDC4-202ENST00000378244 ERVV-2B6SEH9 535 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 ASAP1Q9ULH1 1129 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 CCER2I3L3R5 266 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 TEFQ10587 303 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
DEPDC4-202ENST00000378244 SLC52A2Q9HAB3 445 aa15.45■□□□□ 0.06
DEPDC4-202ENST00000378244 TOGARAM1Q9Y4F4 1720 aa15.44■□□□□ 0.06
DEPDC4-202ENST00000378244 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
DEPDC4-202ENST00000378244 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms