RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.18■■■□□ 2.42
HLA-C-202ENST00000376237 ZBED9Q6R2W3 1325 aa30.17■■■□□ 2.42
HLA-C-202ENST00000376237 CCDC27Q2M243 656 aa30.17■■■□□ 2.42
HLA-C-202ENST00000376237 CDCA7Q9BWT1 371 aaPredicted RBP30.17■■■□□ 2.42
HLA-C-202ENST00000376237 RIPK4P57078 832 aa30.16■■■□□ 2.42
HLA-C-202ENST00000376237 MTHFSDQ2M296 383 aaKnown RBP30.16■■■□□ 2.42
HLA-C-202ENST00000376237 NEUROD2Q15784 382 aa30.15■■■□□ 2.42
HLA-C-202ENST00000376237 SPG7Q9UQ90 795 aa30.15■■■□□ 2.42
HLA-C-202ENST00000376237 MEGF6O75095 1541 aa30.15■■■□□ 2.42
HLA-C-202ENST00000376237 TRPC5Q9UL62 973 aaPredicted RBP30.14■■■□□ 2.42
HLA-C-202ENST00000376237 RRP7AQ9Y3A4 280 aaKnown RBP30.14■■■□□ 2.42
HLA-C-202ENST00000376237 OVOS2A0A0G2JMS6 1433 aa30.13■■■□□ 2.41
HLA-C-202ENST00000376237 LMOD3Q0VAK6 560 aa30.13■■■□□ 2.41
HLA-C-202ENST00000376237 BARGINQ6ZT62 677 aa30.13■■■□□ 2.41
HLA-C-202ENST00000376237 SALL2Q9Y467 1007 aaPredicted RBP30.13■■■□□ 2.41
HLA-C-202ENST00000376237 PHF23Q9BUL5 403 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-202ENST00000376237 SENP3-EIF4A1A0A087X0R7 540 aa30.11■■■□□ 2.41
HLA-C-202ENST00000376237 ZNF772Q68DY9 489 aaPredicted RBP30.11■■■□□ 2.41
HLA-C-202ENST00000376237 DISP2A7MBM2 1401 aa30.1■■■□□ 2.41
HLA-C-202ENST00000376237 ATRNO75882 1429 aa30.09■■■□□ 2.41
HLA-C-202ENST00000376237 HTATSF1O43719 755 aaKnown RBP30.09■■■□□ 2.41
HLA-C-202ENST00000376237 ZCRB1Q8TBF4 217 aaKnown RBP30.09■■■□□ 2.41
HLA-C-202ENST00000376237 PARP4Q9UKK3 1724 aaKnown RBP30.09■■■□□ 2.41
HLA-C-202ENST00000376237 WWC1Q8IX03 1113 aa30.08■■■□□ 2.41
HLA-C-202ENST00000376237 GJD4Q96KN9 370 aaPredicted RBP30.08■■■□□ 2.41
HLA-C-202ENST00000376237 AKAP4Q5JQC9 854 aa30.07■■■□□ 2.4
HLA-C-202ENST00000376237 ZNF530Q6P9A1 599 aaPredicted RBP30.07■■■□□ 2.4
HLA-C-202ENST00000376237 TRIM35Q9UPQ4 493 aa30.07■■■□□ 2.4
HLA-C-202ENST00000376237 GNAT3A8MTJ3 354 aa30.06■■■□□ 2.4
HLA-C-202ENST00000376237 C1orf141Q5JVX7 400 aa30.06■■■□□ 2.4
HLA-C-202ENST00000376237 QTRT2Q9H974 415 aaKnown RBP30.06■■■□□ 2.4
HLA-C-202ENST00000376237 ZNF521Q96K83 1311 aa30.06■■■□□ 2.4
HLA-C-202ENST00000376237 RTF1Q92541 710 aaKnown RBP30.06■■■□□ 2.4
HLA-C-202ENST00000376237 MAP3K5Q99683 1374 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 PCDH11XQ9BZA7 1347 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 PCDH11YQ9BZA8 1340 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 PDE3BQ13370 1112 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 WDR63Q8IWG1 891 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 IFNL2Q8IZJ0 200 aa30.04■■■□□ 2.4
HLA-C-202ENST00000376237 PKD1L3Q7Z443 1732 aa30.03■■■□□ 2.4
HLA-C-202ENST00000376237 EXOC5O00471 708 aa30.03■■■□□ 2.4
HLA-C-202ENST00000376237 CALD1Q05682 793 aaKnown RBP30.02■■■□□ 2.4
HLA-C-202ENST00000376237 HSP90AB1P08238 724 aaKnown RBP30.01■■■□□ 2.39
HLA-C-202ENST00000376237 PHKG2P15735 406 aa30.01■■■□□ 2.39
HLA-C-202ENST00000376237 FAM98CQ17RN3 349 aaKnown RBP30.01■■■□□ 2.39
HLA-C-202ENST00000376237 GOLGA2Q08379 1002 aa29.99■■■□□ 2.39
HLA-C-202ENST00000376237 DDB1Q16531 1140 aa29.99■■■□□ 2.39
HLA-C-202ENST00000376237 WNK3Q9BYP7 1800 aa29.98■■■□□ 2.39
HLA-C-202ENST00000376237 CYP27B1O15528 508 aa29.98■■■□□ 2.39
HLA-C-202ENST00000376237 ONECUT3O60422 494 aaPredicted RBP29.98■■■□□ 2.39
HLA-C-202ENST00000376237 IL16Q14005 1332 aa29.97■■■□□ 2.39
HLA-C-202ENST00000376237 TNS2Q63HR2 1409 aa29.97■■■□□ 2.39
HLA-C-202ENST00000376237 DLG5Q8TDM6 1919 aa29.96■■■□□ 2.39
HLA-C-202ENST00000376237 GLI3P10071 1580 aa29.96■■■□□ 2.39
HLA-C-202ENST00000376237 MCM10Q7L590 875 aa29.95■■■□□ 2.38
HLA-C-202ENST00000376237 DDX54Q8TDD1 881 aaKnown RBP29.95■■■□□ 2.38
HLA-C-202ENST00000376237 RBM6P78332 1123 aaKnown RBP29.94■■■□□ 2.38
HLA-C-202ENST00000376237 DCTN1Q14203 1278 aa29.94■■■□□ 2.38
HLA-C-202ENST00000376237 NKX1-1Q15270 411 aaPredicted RBP29.94■■■□□ 2.38
HLA-C-202ENST00000376237 IL17REQ8NFR9 667 aa29.94■■■□□ 2.38
HLA-C-202ENST00000376237 DCAF5Q96JK2 942 aa29.94■■■□□ 2.38
HLA-C-202ENST00000376237 CEMIPQ8WUJ3 1361 aa29.93■■■□□ 2.38
HLA-C-202ENST00000376237 E9PSI1 815 aa29.92■■■□□ 2.38
HLA-C-202ENST00000376237 MPRIPQ6WCQ1 1025 aa29.92■■■□□ 2.38
HLA-C-202ENST00000376237 RNMTO43148 476 aaKnown RBP29.91■■■□□ 2.38
HLA-C-202ENST00000376237 A0A0G2JS52 829 aa29.91■■■□□ 2.38
HLA-C-202ENST00000376237 MYT1Q01538 1121 aa29.91■■■□□ 2.38
HLA-C-202ENST00000376237 THUMPD2Q9BTF0 503 aaKnown RBP29.91■■■□□ 2.38
HLA-C-202ENST00000376237 THSD7AQ9UPZ6 1657 aa29.89■■■□□ 2.38
HLA-C-202ENST00000376237 SLFN5Q08AF3 891 aa29.89■■■□□ 2.38
HLA-C-202ENST00000376237 LGR6Q9HBX8 967 aa29.89■■■□□ 2.38
HLA-C-202ENST00000376237 MYH16Q9H6N6 1097 aa29.88■■■□□ 2.37
HLA-C-202ENST00000376237 IFT57Q9NWB7 429 aa29.88■■■□□ 2.37
HLA-C-202ENST00000376237 RGS17Q9UGC6 210 aaPredicted RBP29.88■■■□□ 2.37
HLA-C-202ENST00000376237 LRRC37A3O60309 1634 aa29.88■■■□□ 2.37
HLA-C-202ENST00000376237 GNAI1P63096 354 aa29.87■■■□□ 2.37
HLA-C-202ENST00000376237 CDCA7LQ96GN5 454 aa29.87■■■□□ 2.37
HLA-C-202ENST00000376237 CFAP44Q96MT7 982 aa29.87■■■□□ 2.37
HLA-C-202ENST00000376237 SHANK3Q9BYB0 1731 aa29.87■■■□□ 2.37
HLA-C-202ENST00000376237 TEFQ10587 303 aa29.86■■■□□ 2.37
HLA-C-202ENST00000376237 RXRBP28702 533 aa29.86■■■□□ 2.37
HLA-C-202ENST00000376237 SEPT12Q8IYM1 358 aa29.86■■■□□ 2.37
HLA-C-202ENST00000376237 KDM6AO15550 1401 aaPredicted RBP29.86■■■□□ 2.37
HLA-C-202ENST00000376237 ADAMTS7Q9UKP4 1686 aa29.85■■■□□ 2.37
HLA-C-202ENST00000376237 TAF7Q15545 349 aaPredicted RBP29.85■■■□□ 2.37
HLA-C-202ENST00000376237 TRMT2AQ8IZ69 625 aaKnown RBP29.85■■■□□ 2.37
HLA-C-202ENST00000376237 SPINK5Q9NQ38 1064 aaPredicted RBP29.85■■■□□ 2.37
HLA-C-202ENST00000376237 BABAM1Q9NWV8 329 aa29.85■■■□□ 2.37
HLA-C-202ENST00000376237 ERVV-2B6SEH9 535 aa29.84■■■□□ 2.37
HLA-C-202ENST00000376237 CENPBP07199 599 aaPredicted RBP29.84■■■□□ 2.37
HLA-C-202ENST00000376237 ZNF853P0CG23 659 aa29.84■■■□□ 2.37
HLA-C-202ENST00000376237 MARCH10Q8NA82 808 aaPredicted RBP29.83■■■□□ 2.37
HLA-C-202ENST00000376237 CHL1O00533 1208 aa29.81■■■□□ 2.36
HLA-C-202ENST00000376237 SLC52A2Q9HAB3 445 aa29.81■■■□□ 2.36
HLA-C-202ENST00000376237 LAS1LQ9Y4W2 734 aaKnown RBP29.81■■■□□ 2.36
HLA-C-202ENST00000376237 DUSP27Q5VZP5 1158 aa29.81■■■□□ 2.36
HLA-C-202ENST00000376237 CABP4P57796 275 aa29.8■■■□□ 2.36
HLA-C-202ENST00000376237 SCN11AQ9UI33 1791 aa29.79■■■□□ 2.36
HLA-C-202ENST00000376237 POTEAQ6S8J7 498 aa29.78■■■□□ 2.36
HLA-C-202ENST00000376237 MRC1P22897 1456 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms