RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 NUCB1Q02818 461 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 PI4KAP2A4QPH2 592 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 ST18O60284 1047 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
ZNF550-203ENST00000376230 PI4KAP1Q8N8J0 262 aa12.31□□□□□ -0.44
ZNF550-203ENST00000376230 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
ZNF550-203ENST00000376230 MCCP23508 829 aa12.3□□□□□ -0.44
ZNF550-203ENST00000376230 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
ZNF550-203ENST00000376230 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
ZNF550-203ENST00000376230 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
ZNF550-203ENST00000376230 SYNMO15061 1565 aa12.29□□□□□ -0.44
ZNF550-203ENST00000376230 SDSP20132 328 aa12.29□□□□□ -0.44
ZNF550-203ENST00000376230 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
ZNF550-203ENST00000376230 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
ZNF550-203ENST00000376230 CHPF2Q9P2E5 772 aa12.29□□□□□ -0.44
ZNF550-203ENST00000376230 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
ZNF550-203ENST00000376230 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 NEUROD6Q96NK8 337 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 ROBO2Q9HCK4 1378 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
ZNF550-203ENST00000376230 IFIT2P09913 472 aaKnown RBP12.28□□□□□ -0.44
ZNF550-203ENST00000376230 ATF3P18847 181 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 TCEANC2Q96MN5 208 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 DIAPH3Q9NSV4 1193 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 SPG7Q9UQ90 795 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 ATP5J2-PTCD1G3V325 749 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 UNC13BO14795 1591 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
ZNF550-203ENST00000376230 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 CCDC8Q9H0W5 538 aaPredicted RBP12.28□□□□□ -0.44
ZNF550-203ENST00000376230 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
ZNF550-203ENST00000376230 NSD2O96028 1365 aa12.27□□□□□ -0.44
ZNF550-203ENST00000376230 MADDQ8WXG6 1647 aa12.27□□□□□ -0.44
ZNF550-203ENST00000376230 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
ZNF550-203ENST00000376230 CWF19L2Q2TBE0 894 aaKnown RBP12.27□□□□□ -0.45
ZNF550-203ENST00000376230 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
ZNF550-203ENST00000376230 DNTTIP2Q5QJE6 756 aaKnown RBP12.27□□□□□ -0.45
ZNF550-203ENST00000376230 PNMA6EA0A0J9YXQ4 647 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 REC8O95072 547 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
ZNF550-203ENST00000376230 CPA1P15085 419 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 EVA1CP58658 441 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
ZNF550-203ENST00000376230 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 VPS37CA5D8V6 355 aaPredicted RBP12.26□□□□□ -0.45
ZNF550-203ENST00000376230 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
ZNF550-203ENST00000376230 STK3Q13188 491 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 DNAJC2Q99543 621 aaKnown RBP12.26□□□□□ -0.45
ZNF550-203ENST00000376230 ZMYND15Q9H091 742 aa12.26□□□□□ -0.45
ZNF550-203ENST00000376230 CEP85Q6P2H3 762 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 PPP1R42Q7Z4L9 355 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 ABCC3O15438 1527 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 EFCAB6Q5THR3 1501 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 GNAI3P08754 354 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 ABCA6Q8N139 1617 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 MSH6P52701 1360 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 CLCN1P35523 988 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 GORABQ5T7V8 394 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 STK11IPQ8N1F8 1099 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
ZNF550-203ENST00000376230 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
ZNF550-203ENST00000376230 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
ZNF550-203ENST00000376230 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
ZNF550-203ENST00000376230 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
ZNF550-203ENST00000376230 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
ZNF550-203ENST00000376230 CEP152O94986 1710 aa12.24□□□□□ -0.45
ZNF550-203ENST00000376230 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
ZNF550-203ENST00000376230 GSPT1P15170 499 aaKnown RBP12.23□□□□□ -0.45
ZNF550-203ENST00000376230 G3BP1Q13283 466 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF550-203ENST00000376230 RBM27Q9P2N5 1060 aaKnown RBP12.23□□□□□ -0.45
ZNF550-203ENST00000376230 MX1P20591 662 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 HOXC9P31274 260 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
ZNF550-203ENST00000376230 RPAP2Q8IXW5 612 aaPredicted RBP12.23□□□□□ -0.45
ZNF550-203ENST00000376230 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 IL16Q14005 1332 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 AAMPQ13685 434 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 AACSQ86V21 672 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
ZNF550-203ENST00000376230 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms