RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 STK11IPQ8N1F8 1099 aa11.51□□□□□ -0.57
SPEN-201ENST00000375759 NEMFO60524 1076 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
SPEN-201ENST00000375759 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
SPEN-201ENST00000375759 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 CETN2P41208 172 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 MCM5P33992 734 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
SPEN-201ENST00000375759 CCDC83Q8IWF9 413 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
SPEN-201ENST00000375759 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.5□□□□□ -0.574e-7■■□□□ 12.7
SPEN-201ENST00000375759 BCAR3O75815 825 aa11.5□□□□□ -0.57
SPEN-201ENST00000375759 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 SCAND2PQ9GZW5 306 aaPredicted RBP11.49□□□□□ -0.57
SPEN-201ENST00000375759 CTAGE5O15320 804 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 POTEJP0CG39 1038 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 PNISRQ8TF01 805 aaKnown RBP11.49□□□□□ -0.57
SPEN-201ENST00000375759 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
SPEN-201ENST00000375759 RUSC2Q8N2Y8 1516 aa11.49□□□□□ -0.57
SPEN-201ENST00000375759 GCOM1H8Y6P7 765 aaPredicted RBP11.48□□□□□ -0.57
SPEN-201ENST00000375759 MYZAPP0CAP1 466 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 CBX1P83916 185 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 VPS36Q86VN1 386 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 UBAC1Q9BSL1 405 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 GPRASP1Q5JY77 1395 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 NUP133Q8WUM0 1156 aa11.48□□□□□ -0.57
SPEN-201ENST00000375759 GSDMDP57764 484 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 TRIM21P19474 475 aaKnown RBP11.47□□□□□ -0.57
SPEN-201ENST00000375759 CWC27Q6UX04 472 aaKnown RBP11.47□□□□□ -0.57
SPEN-201ENST00000375759 HFM1A2PYH4 1435 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 NCOA2Q15596 1464 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 ATF3P18847 181 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 NLRP6P59044 892 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 AACSQ86V21 672 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 STAMBPO95630 424 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 FGFR1OPO95684 399 aaKnown RBP11.47□□□□□ -0.57
SPEN-201ENST00000375759 TSR2Q969E8 191 aaKnown RBP11.47□□□□□ -0.57
SPEN-201ENST00000375759 FKBP15Q5T1M5 1219 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 GOLGA6L9A6NEM1 432 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 DYNC1I1O14576 645 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 TOP1P11387 765 aaKnown RBP11.47□□□□□ -0.57
SPEN-201ENST00000375759 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
SPEN-201ENST00000375759 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
SPEN-201ENST00000375759 SMC1AQ14683 1233 aaKnown RBP11.46□□□□□ -0.57
SPEN-201ENST00000375759 U3KPZ7 1027 aaPredicted RBP11.46□□□□□ -0.57
SPEN-201ENST00000375759 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
SPEN-201ENST00000375759 NF2P35240 595 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 KIF4BQ2VIQ3 1234 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 CASKIN1Q8WXD9 1431 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 ABTB2Q8N961 1025 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 ATP2B2Q01814 1243 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 CAMK4Q16566 473 aa11.46□□□□□ -0.58
SPEN-201ENST00000375759 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 MAP4K4O95819 1239 aaPredicted RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 TDO2P48775 406 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 SRGAP3O43295 1099 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 CAVIN2O95810 425 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 FKBP4Q02790 459 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPEN-201ENST00000375759 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 URI1O94763 535 aaPredicted RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 CCDC113Q9H0I3 377 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 SIL1Q9H173 461 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 PHAXQ9H814 394 aaKnown RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 CCDC175P0C221 793 aa11.45□□□□□ -0.58
SPEN-201ENST00000375759 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
SPEN-201ENST00000375759 EHBP1L1Q8N3D4 1523 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 TNNT1P13805 278 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 RPAP2Q8IXW5 612 aaPredicted RBP11.44□□□□□ -0.58
SPEN-201ENST00000375759 DNAI2Q9GZS0 605 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 PAXBP1Q9Y5B6 917 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 SSBP05455 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPEN-201ENST00000375759 WDR97A6NE52 1622 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 MAPK8IP2Q13387 824 aaPredicted RBP11.44□□□□□ -0.58
SPEN-201ENST00000375759 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 ERBINQ96RT1 1412 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 MPHOSPH8Q99549 860 aa11.44□□□□□ -0.58
SPEN-201ENST00000375759 SSR1P43307 286 aaKnown RBP11.44□□□□□ -0.58
SPEN-201ENST00000375759 RAB11FIP3O75154 756 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 TSG101Q99816 390 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 NKTRP30414 1462 aaKnown RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 GIGYF2Q6Y7W6 1299 aaKnown RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 PRIMPOLQ96LW4 560 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 SPATA24Q86W54 205 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 MEX3CQ5U5Q3 659 aaKnown RBP11.43□□□□□ -0.58
SPEN-201ENST00000375759 CTR9Q6PD62 1173 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 RAI14Q9P0K7 980 aa11.43□□□□□ -0.58
SPEN-201ENST00000375759 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms