RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 FAM83GA6ND36 823 aa20.05■□□□□ 0.8
VARS-215ENST00000375663 RBM27Q9P2N5 1060 aaKnown RBP20.05■□□□□ 0.8
VARS-215ENST00000375663 RAPGEF4Q8WZA2 1011 aa20.05■□□□□ 0.8
VARS-215ENST00000375663 GDPD2Q9HCC8 539 aa20.05■□□□□ 0.8
VARS-215ENST00000375663 BLOC1S2Q6QNY1 142 aa20.04■□□□□ 0.8
VARS-215ENST00000375663 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
VARS-215ENST00000375663 ZSCAN31Q96LW9 406 aaPredicted RBP20.04■□□□□ 0.8
VARS-215ENST00000375663 DNAJC2Q99543 621 aaKnown RBP20.04■□□□□ 0.8
VARS-215ENST00000375663 PES1O00541 588 aaKnown RBP20.03■□□□□ 0.8
VARS-215ENST00000375663 ANKRD1Q15327 319 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 RALYLQ86SE5 291 aaKnown RBP20.03■□□□□ 0.8
VARS-215ENST00000375663 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
VARS-215ENST00000375663 MNS1Q8NEH6 495 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 FMNL2Q96PY5 1086 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 KDM6BO15054 1643 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 AKAP17AQ02040 695 aaKnown RBP20.03■□□□□ 0.8
VARS-215ENST00000375663 ZSCAN23Q3MJ62 389 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 NUP62CLQ9H1M0 184 aa20.03■□□□□ 0.8
VARS-215ENST00000375663 SDSP20132 328 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 RAB3GAP1Q15042 981 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 FERMT3Q86UX7 667 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 SIL1Q9H173 461 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 PDCL3Q9H2J4 239 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 WASHC4Q2M389 1173 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 KDM5BQ9UGL1 1544 aa20.02■□□□□ 0.8
VARS-215ENST00000375663 KIF1BPQ96EK5 621 aa20.02■□□□□ 0.79
VARS-215ENST00000375663 TPM1P09493 284 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
VARS-215ENST00000375663 USP25Q9UHP3 1055 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 AACSQ86V21 672 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 PLCH2O75038 1416 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 CCDC183Q5T5S1 534 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
VARS-215ENST00000375663 RRAGDQ9NQL2 400 aaPredicted RBP20.01■□□□□ 0.79
VARS-215ENST00000375663 PTPRCP08575 1304 aa20■□□□□ 0.79
VARS-215ENST00000375663 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
VARS-215ENST00000375663 ARGLU1Q9NWB6 273 aaPredicted RBP20■□□□□ 0.79
VARS-215ENST00000375663 CCDC112Q8NEF3 446 aa20■□□□□ 0.79
VARS-215ENST00000375663 DISP1Q96F81 1524 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 FANCAO15360 1455 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 GPS2Q13227 327 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 MRPL50Q8N5N7 158 aaKnown RBP19.99■□□□□ 0.79
VARS-215ENST00000375663 NLRP2Q9NX02 1062 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 HOOK1Q9UJC3 728 aaKnown RBP19.99■□□□□ 0.79
VARS-215ENST00000375663 GLRX3O76003 335 aaKnown RBP19.99■□□□□ 0.79
VARS-215ENST00000375663 TEX35Q5T0J7 233 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
VARS-215ENST00000375663 UBE2Q2Q8WVN8 375 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 SLC26A8Q96RN1 970 aa19.99■□□□□ 0.79
VARS-215ENST00000375663 NFXL1Q6ZNB6 911 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
VARS-215ENST00000375663 SMC2O95347 1197 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 MAP3K11Q16584 847 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 MEIS3Q99687 375 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 TSR1Q2NL82 804 aaKnown RBP19.98■□□□□ 0.79
VARS-215ENST00000375663 TMX3Q96JJ7 454 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 TRAPPC8Q9Y2L5 1435 aa19.98■□□□□ 0.79
VARS-215ENST00000375663 C16orf71Q8IYS4 520 aaPredicted RBP19.97■□□□□ 0.79
VARS-215ENST00000375663 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
VARS-215ENST00000375663 WASLO00401 505 aaPredicted RBP19.97■□□□□ 0.79
VARS-215ENST00000375663 MCM5P33992 734 aa19.97■□□□□ 0.79
VARS-215ENST00000375663 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
VARS-215ENST00000375663 VAMP4O75379 141 aa19.97■□□□□ 0.79
VARS-215ENST00000375663 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
VARS-215ENST00000375663 ZNF396Q96N95 335 aaPredicted RBP19.97■□□□□ 0.79
VARS-215ENST00000375663 RAB11FIP3O75154 756 aa19.96■□□□□ 0.79
VARS-215ENST00000375663 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
VARS-215ENST00000375663 LARP6Q9BRS8 491 aaKnown RBP19.96■□□□□ 0.79
VARS-215ENST00000375663 STK38Q15208 465 aa19.96■□□□□ 0.79
VARS-215ENST00000375663 FBXO31Q5XUX0 539 aaPredicted RBP19.96■□□□□ 0.79
VARS-215ENST00000375663 LIMCH1Q9UPQ0 1083 aa19.96■□□□□ 0.79
VARS-215ENST00000375663 ME1P48163 572 aa19.96■□□□□ 0.79
VARS-215ENST00000375663 FLIIQ13045 1269 aa19.95■□□□□ 0.79
VARS-215ENST00000375663 LRSAM1Q6UWE0 723 aa19.95■□□□□ 0.78
VARS-215ENST00000375663 CAMK4Q16566 473 aa19.95■□□□□ 0.78
VARS-215ENST00000375663 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
VARS-215ENST00000375663 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
VARS-215ENST00000375663 SAFBQ15424 915 aaKnown RBP eCLIP19.94■□□□□ 0.78
VARS-215ENST00000375663 FILIP1Q7Z7B0 1213 aa19.94■□□□□ 0.78
VARS-215ENST00000375663 PDIA4P13667 645 aaKnown RBP19.94■□□□□ 0.78
VARS-215ENST00000375663 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
VARS-215ENST00000375663 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
VARS-215ENST00000375663 A0A0U1RQG5 324 aaPredicted RBP19.93■□□□□ 0.78
VARS-215ENST00000375663 PDE1AP54750 535 aa19.93■□□□□ 0.78
VARS-215ENST00000375663 DCTPP1Q9H773 170 aa19.93■□□□□ 0.78
VARS-215ENST00000375663 PRIM1P49642 420 aaKnown RBP19.93■□□□□ 0.78
VARS-215ENST00000375663 PDCL2Q8N4E4 241 aa19.93■□□□□ 0.78
VARS-215ENST00000375663 PUS7Q96PZ0 661 aaKnown RBP19.93■□□□□ 0.78
VARS-215ENST00000375663 CFAP45Q9UL16 551 aa19.93■□□□□ 0.78
VARS-215ENST00000375663 PDILTQ8N807 584 aa19.92■□□□□ 0.78
VARS-215ENST00000375663 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
VARS-215ENST00000375663 SH2B1Q9NRF2 756 aaPredicted RBP19.92■□□□□ 0.78
VARS-215ENST00000375663 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
VARS-215ENST00000375663 TAF7Q15545 349 aaPredicted RBP19.91■□□□□ 0.78
VARS-215ENST00000375663 STX6O43752 255 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms