RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SERPINC1P01008 464 aa13.67□□□□□ -0.22
PTCH1-203ENST00000375274 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
PTCH1-203ENST00000375274 EMILIN1Q9Y6C2 1016 aa13.67□□□□□ -0.22
PTCH1-203ENST00000375274 KRT32Q14532 448 aa13.67□□□□□ -0.22
PTCH1-203ENST00000375274 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 RUFY1Q96T51 708 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 F6X3S4 739 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 ESCO1Q5FWF5 840 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
PTCH1-203ENST00000375274 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCH1-203ENST00000375274 FILIP1LQ4L180 1135 aa13.65□□□□□ -0.22
PTCH1-203ENST00000375274 CCDC183Q5T5S1 534 aa13.65□□□□□ -0.22
PTCH1-203ENST00000375274 CCDC158Q5M9N0 1113 aa13.65□□□□□ -0.22
PTCH1-203ENST00000375274 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
PTCH1-203ENST00000375274 NME9Q86XW9 330 aa13.65□□□□□ -0.22
PTCH1-203ENST00000375274 IL16Q14005 1332 aa13.65□□□□□ -0.23
PTCH1-203ENST00000375274 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 PRKCSHP14314 528 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-203ENST00000375274 GPATCH8Q9UKJ3 1502 aaKnown RBP13.64□□□□□ -0.23
PTCH1-203ENST00000375274 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
PTCH1-203ENST00000375274 AK7Q96M32 723 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 USP25Q9UHP3 1055 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
PTCH1-203ENST00000375274 NSD2O96028 1365 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 KIF14Q15058 1648 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 NUCB1Q02818 461 aa13.64□□□□□ -0.23
PTCH1-203ENST00000375274 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
PTCH1-203ENST00000375274 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 SCAND2PQ9GZW5 306 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 ATF3P18847 181 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 CLCN1P35523 988 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 BRPF1P55201 1214 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 CAMK4Q16566 473 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 NOM1Q5C9Z4 860 aaKnown RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 ERCC4Q92889 916 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 MYL6BP14649 208 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 TESK2Q96S53 571 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 CWC15Q9P013 229 aaKnown RBP13.63□□□□□ -0.23
PTCH1-203ENST00000375274 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
PTCH1-203ENST00000375274 FYB1O15117 783 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 RAD21O60216 631 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 TATP17735 454 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-203ENST00000375274 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
PTCH1-203ENST00000375274 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 PDCL3Q9H2J4 239 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
PTCH1-203ENST00000375274 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
PTCH1-203ENST00000375274 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 CAGE1Q8TC20 777 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 PER1O15534 1290 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 PTPRCP08575 1304 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
PTCH1-203ENST00000375274 MCM5P33992 734 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 IDI1Q13907 227 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 TRIM22Q8IYM9 498 aa13.61□□□□□ -0.23
PTCH1-203ENST00000375274 OFD1O75665 1012 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 MBIPQ9NS73 344 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 NOS1P29475 1434 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 RLBP1P12271 317 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCH1-203ENST00000375274 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
PTCH1-203ENST00000375274 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 PIP4K2AP48426 406 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-203ENST00000375274 TAF7Q15545 349 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-203ENST00000375274 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 CBFA2T2O43439 604 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 FLIIQ13045 1269 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 SNX21Q969T3 373 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
PTCH1-203ENST00000375274 TNNQ9UQP3 1299 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 TXLNAP40222 546 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-203ENST00000375274 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
PTCH1-203ENST00000375274 SEC24BO95487 1268 aa13.58□□□□□ -0.23
PTCH1-203ENST00000375274 DACH1Q9UI36 760 aa13.58□□□□□ -0.23
PTCH1-203ENST00000375274 FAM135AQ9P2D6 1515 aa13.58□□□□□ -0.23
PTCH1-203ENST00000375274 CDR1P51861 262 aa13.58□□□□□ -0.24
PTCH1-203ENST00000375274 PTPN14Q15678 1187 aa13.58□□□□□ -0.24
PTCH1-203ENST00000375274 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms