RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CLCN1P35523 988 aa24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 ZNHIT6Q9NWK9 470 aaKnown RBP24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 IGHDP01880 384 aa24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 UVSSAQ2YD98 709 aa24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 ZSCAN25Q6NSZ9 544 aa24.99■■□□□ 1.59
TGFBR1-202ENST00000374994 TXLNBQ8N3L3 684 aa24.98■■□□□ 1.59
TGFBR1-202ENST00000374994 IL1RAPL2Q9NP60 686 aa24.98■■□□□ 1.59
TGFBR1-202ENST00000374994 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
TGFBR1-202ENST00000374994 CASTP20810 708 aaKnown RBP24.98■■□□□ 1.59
TGFBR1-202ENST00000374994 NUTM2GQ5VZR2 741 aa24.98■■□□□ 1.59
TGFBR1-202ENST00000374994 H0YHG0 523 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 FAM69CQ0P6D2 419 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 MPNDQ8N594 471 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 EXOC6BQ9Y2D4 811 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 PARD3Q8TEW0 1356 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 BAG4O95429 457 aaKnown RBP24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 NEMFO60524 1076 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 BIVM-ERCC5R4GMW8 1640 aa24.97■■□□□ 1.59
TGFBR1-202ENST00000374994 ZNF530Q6P9A1 599 aaPredicted RBP24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 CCDC61Q9Y6R9 512 aa24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 TTC39AQ5SRH9 613 aa24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 ARHGAP45Q92619 1136 aa24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 PTPRCP08575 1304 aa24.96■■□□□ 1.59
TGFBR1-202ENST00000374994 DISP3Q9P2K9 1392 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 TBC1D9Q6ZT07 1266 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 BCL11BQ9C0K0 894 aaPredicted RBP24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 MAP4K4O95819 1239 aaPredicted RBP24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 TRIM34Q9BYJ4 488 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 FILIP1Q7Z7B0 1213 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 LIMCH1Q9UPQ0 1083 aa24.95■■□□□ 1.58
TGFBR1-202ENST00000374994 NACAP1Q9BZK3 213 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 SLC3A2P08195 630 aaKnown RBP24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 UBXN4Q92575 508 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 CTAGE5O15320 804 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 SNX21Q969T3 373 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 LUC7LQ9NQ29 371 aaKnown RBP24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 ANO10Q9NW15 660 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 KIF14Q15058 1648 aa24.94■■□□□ 1.58
TGFBR1-202ENST00000374994 NUP160Q12769 1436 aa24.93■■□□□ 1.58
TGFBR1-202ENST00000374994 ATP2B1P20020 1258 aa24.93■■□□□ 1.58
TGFBR1-202ENST00000374994 EPS15P42566 896 aa24.93■■□□□ 1.58
TGFBR1-202ENST00000374994 TATP17735 454 aaPredicted RBP24.93■■□□□ 1.58
TGFBR1-202ENST00000374994 PTPN14Q15678 1187 aa24.93■■□□□ 1.58
TGFBR1-202ENST00000374994 CAVIN2O95810 425 aa24.92■■□□□ 1.58
TGFBR1-202ENST00000374994 STIM1Q13586 685 aa24.92■■□□□ 1.58
TGFBR1-202ENST00000374994 C8orf34Q49A92 452 aa24.92■■□□□ 1.58
TGFBR1-202ENST00000374994 TTLL5Q6EMB2 1281 aa24.92■■□□□ 1.58
TGFBR1-202ENST00000374994 DDX19AQ9NUU7 478 aaKnown RBP24.92■■□□□ 1.58
TGFBR1-202ENST00000374994 RRS1Q15050 365 aaKnown RBP24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 TCEAL9Q9UHQ7 104 aa24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 GNAT3A8MTJ3 354 aa24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 SFPQP23246 707 aaKnown RBP eCLIP24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 DYNC1I1O14576 645 aa24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 PRKCSHP14314 528 aaPredicted RBP24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 XPCQ01831 940 aaPredicted RBP24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 WASF1Q92558 559 aa24.91■■□□□ 1.58
TGFBR1-202ENST00000374994 CCDC83Q8IWF9 413 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 PRIMPOLQ96LW4 560 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 FAM135AQ9P2D6 1515 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 KIF18AQ8NI77 898 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 AXDND1Q5T1B0 1012 aaPredicted RBP24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 IQCEQ6IPM2 695 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 KIF6Q6ZMV9 814 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 NUTM1Q86Y26 1132 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 NUCB1Q02818 461 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 NOL7Q9UMY1 257 aaKnown RBP24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 SIL1Q9H173 461 aa24.9■■□□□ 1.58
TGFBR1-202ENST00000374994 ZSCAN12O43309 604 aa24.89■■□□□ 1.58
TGFBR1-202ENST00000374994 RDXP35241 583 aaKnown RBP24.89■■□□□ 1.58
TGFBR1-202ENST00000374994 CGNQ9P2M7 1197 aaKnown RBP24.89■■□□□ 1.57
TGFBR1-202ENST00000374994 THUMPD2Q9BTF0 503 aaKnown RBP24.89■■□□□ 1.57
TGFBR1-202ENST00000374994 GBP3Q9H0R5 595 aa24.89■■□□□ 1.57
TGFBR1-202ENST00000374994 ATF3P18847 181 aa24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 TMCO3Q6UWJ1 677 aa24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 TTC22Q5TAA0 569 aa24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 PRPF40BQ6NWY9 871 aaKnown RBP24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 BRPF1P55201 1214 aaPredicted RBP24.88■■□□□ 1.57
TGFBR1-202ENST00000374994 SMARCA5O60264 1052 aaPredicted RBP24.87■■□□□ 1.57
TGFBR1-202ENST00000374994 HMGB1P09429 215 aaKnown RBP24.87■■□□□ 1.57
TGFBR1-202ENST00000374994 XRCC6P12956 609 aaKnown RBP eCLIP24.87■■□□□ 1.572e-6■■■■■ 34.5
TGFBR1-202ENST00000374994 CCDC69A6NI79 296 aa24.87■■□□□ 1.57
TGFBR1-202ENST00000374994 ANKRD36BQ8N2N9 1353 aa24.87■■□□□ 1.57
TGFBR1-202ENST00000374994 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
TGFBR1-202ENST00000374994 GNL3LQ9NVN8 582 aaKnown RBP24.86■■□□□ 1.57
TGFBR1-202ENST00000374994 USP25Q9UHP3 1055 aa24.86■■□□□ 1.57
TGFBR1-202ENST00000374994 SPG7Q9UQ90 795 aa24.86■■□□□ 1.57
TGFBR1-202ENST00000374994 CCDC191Q8NCU4 936 aa24.86■■□□□ 1.57
TGFBR1-202ENST00000374994 CEP126Q9P2H0 1117 aa24.85■■□□□ 1.57
TGFBR1-202ENST00000374994 U3KPZ7 1027 aaPredicted RBP24.85■■□□□ 1.57
TGFBR1-202ENST00000374994 CT47A1Q5JQC4 288 aaPredicted RBP24.85■■□□□ 1.57
TGFBR1-202ENST00000374994 LRSAM1Q6UWE0 723 aa24.85■■□□□ 1.57
TGFBR1-202ENST00000374994 FERMT3Q86UX7 667 aa24.85■■□□□ 1.57
TGFBR1-202ENST00000374994 SYTL4Q96C24 671 aaPredicted RBP24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 CDK5RAP3Q96JB5 506 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 CNNM1Q9NRU3 951 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms