RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 USHBP1Q8N6Y0 703 aa25.49■■□□□ 1.67
SRSF4-201ENST00000373795 NWD1Q149M9 1564 aa25.49■■□□□ 1.67
SRSF4-201ENST00000373795 HSPA2P54652 639 aa25.49■■□□□ 1.67
SRSF4-201ENST00000373795 LMOD2Q6P5Q4 547 aa25.49■■□□□ 1.67
SRSF4-201ENST00000373795 KIF24Q5T7B8 1368 aa25.49■■□□□ 1.67
SRSF4-201ENST00000373795 RWDD1Q9H446 243 aaPredicted RBP25.48■■□□□ 1.67
SRSF4-201ENST00000373795 LTN1O94822 1766 aa25.48■■□□□ 1.67
SRSF4-201ENST00000373795 RTF1Q92541 710 aaKnown RBP25.47■■□□□ 1.67
SRSF4-201ENST00000373795 C19orf44Q9H6X5 657 aa25.47■■□□□ 1.67
SRSF4-201ENST00000373795 CRB1P82279 1406 aa25.46■■□□□ 1.67
SRSF4-201ENST00000373795 IP6K1Q92551 441 aa25.46■■□□□ 1.67
SRSF4-201ENST00000373795 ZBTB40Q9NUA8 1239 aa25.46■■□□□ 1.67
SRSF4-201ENST00000373795 GAS2L2Q8NHY3 880 aa25.44■■□□□ 1.66
SRSF4-201ENST00000373795 ARHGAP45Q92619 1136 aa25.44■■□□□ 1.66
SRSF4-201ENST00000373795 NFAT5O94916 1531 aa25.44■■□□□ 1.66
SRSF4-201ENST00000373795 NFKBIBQ15653 356 aa25.43■■□□□ 1.66
SRSF4-201ENST00000373795 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
SRSF4-201ENST00000373795 PDZRN3Q9UPQ7 1066 aa25.43■■□□□ 1.66
SRSF4-201ENST00000373795 KCNH5Q8NCM2 988 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 USP19O94966 1318 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 SEC24BO95487 1268 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 GCP02774 474 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
SRSF4-201ENST00000373795 C1orf167Q5SNV9 1468 aa25.41■■□□□ 1.66
SRSF4-201ENST00000373795 TMEM94Q12767 1356 aa25.41■■□□□ 1.66
SRSF4-201ENST00000373795 RTL1A6NKG5 1358 aa25.4■■□□□ 1.66
SRSF4-201ENST00000373795 STRCP1A6NGW2 1772 aa25.4■■□□□ 1.66
SRSF4-201ENST00000373795 DDX17Q92841 729 aaKnown RBP25.39■■□□□ 1.66
SRSF4-201ENST00000373795 TSPYL4Q9UJ04 414 aa25.39■■□□□ 1.66
SRSF4-201ENST00000373795 GNAT3A8MTJ3 354 aa25.39■■□□□ 1.65
SRSF4-201ENST00000373795 ZBTB7BO15156 539 aaPredicted RBP25.39■■□□□ 1.65
SRSF4-201ENST00000373795 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
SRSF4-201ENST00000373795 LRRC59Q96AG4 307 aaKnown RBP25.38■■□□□ 1.65
SRSF4-201ENST00000373795 ATF3P18847 181 aa25.38■■□□□ 1.65
SRSF4-201ENST00000373795 HDAC1Q13547 482 aaPredicted RBP25.37■■□□□ 1.65
SRSF4-201ENST00000373795 IL17REQ8NFR9 667 aa25.37■■□□□ 1.65
SRSF4-201ENST00000373795 KIAA0232Q92628 1395 aa25.36■■□□□ 1.65
SRSF4-201ENST00000373795 ABCC4O15439 1325 aa25.36■■□□□ 1.65
SRSF4-201ENST00000373795 ARHGEF25Q86VW2 580 aa25.36■■□□□ 1.65
SRSF4-201ENST00000373795 C1orf115Q9H7X2 142 aa25.36■■□□□ 1.65
SRSF4-201ENST00000373795 RGPD2P0DJD1 1756 aa25.34■■□□□ 1.65
SRSF4-201ENST00000373795 HTATSF1O43719 755 aaKnown RBP25.34■■□□□ 1.65
SRSF4-201ENST00000373795 API5Q9BZZ5 524 aaKnown RBP25.33■■□□□ 1.65
SRSF4-201ENST00000373795 MSH6P52701 1360 aa25.33■■□□□ 1.65
SRSF4-201ENST00000373795 TRPM3Q9HCF6 1732 aaPredicted RBP25.32■■□□□ 1.64
SRSF4-201ENST00000373795 AXIN2Q9Y2T1 843 aa25.32■■□□□ 1.64
SRSF4-201ENST00000373795 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
SRSF4-201ENST00000373795 SLC4A2P04920 1241 aa25.31■■□□□ 1.64
SRSF4-201ENST00000373795 MST1RQ04912 1400 aa25.31■■□□□ 1.64
SRSF4-201ENST00000373795 HAP1P54257 671 aaPredicted RBP25.3■■□□□ 1.64
SRSF4-201ENST00000373795 ZC3H6P61129 1189 aaKnown RBP25.29■■□□□ 1.64
SRSF4-201ENST00000373795 SMC5Q8IY18 1101 aa25.29■■□□□ 1.64
SRSF4-201ENST00000373795 SLIT3O75094 1523 aa25.28■■□□□ 1.64
SRSF4-201ENST00000373795 KDM4FA0A1W2PPD8 638 aa25.27■■□□□ 1.64
SRSF4-201ENST00000373795 ANKRD24Q8TF21 1146 aa25.27■■□□□ 1.64
SRSF4-201ENST00000373795 KIF1AQ12756 1690 aa25.27■■□□□ 1.64
SRSF4-201ENST00000373795 TAF7Q15545 349 aaPredicted RBP25.26■■□□□ 1.63
SRSF4-201ENST00000373795 G2E3Q7L622 706 aa25.26■■□□□ 1.63
SRSF4-201ENST00000373795 LGR6Q9HBX8 967 aa25.26■■□□□ 1.63
SRSF4-201ENST00000373795 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
SRSF4-201ENST00000373795 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
SRSF4-201ENST00000373795 GSE1Q14687 1217 aa25.25■■□□□ 1.63
SRSF4-201ENST00000373795 RGS12O14924 1447 aa25.25■■□□□ 1.63
SRSF4-201ENST00000373795 SIRT2Q8IXJ6 389 aa25.25■■□□□ 1.63
SRSF4-201ENST00000373795 NECTIN2Q92692 538 aa25.25■■□□□ 1.63
SRSF4-201ENST00000373795 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
SRSF4-201ENST00000373795 CHMP4BQ9H444 224 aaKnown RBP25.24■■□□□ 1.63
SRSF4-201ENST00000373795 LRRC37A3O60309 1634 aa25.24■■□□□ 1.63
SRSF4-201ENST00000373795 INTS3Q68E01 1043 aaKnown RBP25.24■■□□□ 1.63
SRSF4-201ENST00000373795 CABLES1Q8TDN4 633 aa25.23■■□□□ 1.63
SRSF4-201ENST00000373795 RGPD5Q99666 1765 aa25.21■■□□□ 1.63
SRSF4-201ENST00000373795 PTPRCP08575 1304 aa25.21■■□□□ 1.63
SRSF4-201ENST00000373795 ALS2Q96Q42 1657 aa25.21■■□□□ 1.63
SRSF4-201ENST00000373795 MED1Q15648 1581 aaPredicted RBP25.21■■□□□ 1.63
SRSF4-201ENST00000373795 F6X3S4 739 aa25.2■■□□□ 1.62
SRSF4-201ENST00000373795 ZNF530Q6P9A1 599 aaPredicted RBP25.2■■□□□ 1.62
SRSF4-201ENST00000373795 MPRIPQ6WCQ1 1025 aa25.2■■□□□ 1.62
SRSF4-201ENST00000373795 DCCP43146 1447 aa25.2■■□□□ 1.62
SRSF4-201ENST00000373795 NCOA3Q9Y6Q9 1424 aa25.2■■□□□ 1.62
SRSF4-201ENST00000373795 NUCB1Q02818 461 aa25.19■■□□□ 1.62
SRSF4-201ENST00000373795 IL27Q8NEV9 243 aa25.19■■□□□ 1.62
SRSF4-201ENST00000373795 LNPKQ9C0E8 428 aa25.19■■□□□ 1.62
SRSF4-201ENST00000373795 CEMIPQ8WUJ3 1361 aa25.18■■□□□ 1.62
SRSF4-201ENST00000373795 BECN1Q14457 450 aa25.18■■□□□ 1.62
SRSF4-201ENST00000373795 PLEKHO1Q53GL0 409 aaPredicted RBP25.18■■□□□ 1.62
SRSF4-201ENST00000373795 UPF2Q9HAU5 1272 aaKnown RBP25.18■■□□□ 1.62
SRSF4-201ENST00000373795 TBC1D32Q96NH3 1257 aa25.18■■□□□ 1.62
SRSF4-201ENST00000373795 SLC4A10Q6U841 1118 aa25.17■■□□□ 1.62
SRSF4-201ENST00000373795 STK31Q9BXU1 1019 aa25.17■■□□□ 1.62
SRSF4-201ENST00000373795 NPHP3Q7Z494 1330 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 CHD1LQ86WJ1 897 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 LMTK3Q96Q04 1460 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 ANKRD45Q5TZF3 282 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 BABAM1Q9NWV8 329 aa25.16■■□□□ 1.62
SRSF4-201ENST00000373795 XIRP1Q702N8 1843 aaKnown RBP25.15■■□□□ 1.62
SRSF4-201ENST00000373795 CCDC30Q5VVM6 783 aa25.15■■□□□ 1.62
SRSF4-201ENST00000373795 STRCQ7RTU9 1775 aa25.15■■□□□ 1.62
SRSF4-201ENST00000373795 ERBB3P21860 1342 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms