RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 NCAPD2Q15021 1401 aa25.41■■□□□ 1.66
COL16A1-201ENST00000373667 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
COL16A1-201ENST00000373667 LRRC37A3O60309 1634 aa25.4■■□□□ 1.66
COL16A1-201ENST00000373667 OVOS2A0A0G2JMS6 1433 aa25.39■■□□□ 1.66
COL16A1-201ENST00000373667 DIEXFQ68CQ4 756 aaKnown RBP25.39■■□□□ 1.66
COL16A1-201ENST00000373667 SPG7Q9UQ90 795 aa25.39■■□□□ 1.66
COL16A1-201ENST00000373667 RGPD1P0DJD0 1748 aa25.39■■□□□ 1.65
COL16A1-201ENST00000373667 TNS2Q63HR2 1409 aa25.37■■□□□ 1.65
COL16A1-201ENST00000373667 PLEKHO1Q53GL0 409 aaPredicted RBP25.37■■□□□ 1.65
COL16A1-201ENST00000373667 FAM196AQ6ZSG2 479 aa25.36■■□□□ 1.65
COL16A1-201ENST00000373667 KDRP35968 1356 aa25.35■■□□□ 1.65
COL16A1-201ENST00000373667 WDR43Q15061 677 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL16A1-201ENST00000373667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL16A1-201ENST00000373667 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
COL16A1-201ENST00000373667 CCDC184Q52MB2 194 aa25.32■■□□□ 1.64
COL16A1-201ENST00000373667 PCDH11XQ9BZA7 1347 aa25.32■■□□□ 1.64
COL16A1-201ENST00000373667 PCDH11YQ9BZA8 1340 aa25.32■■□□□ 1.64
COL16A1-201ENST00000373667 FCHSD2O94868 740 aa25.31■■□□□ 1.64
COL16A1-201ENST00000373667 PRKAR2BP31323 418 aa25.31■■□□□ 1.64
COL16A1-201ENST00000373667 CYP27B1O15528 508 aa25.3■■□□□ 1.64
COL16A1-201ENST00000373667 ZNF530Q6P9A1 599 aaPredicted RBP25.3■■□□□ 1.64
COL16A1-201ENST00000373667 RSPH6AQ9H0K4 717 aa25.3■■□□□ 1.64
COL16A1-201ENST00000373667 MRS2Q9HD23 443 aa25.3■■□□□ 1.64
COL16A1-201ENST00000373667 IFNL2Q8IZJ0 200 aa25.28■■□□□ 1.64
COL16A1-201ENST00000373667 ACSBG1Q96GR2 724 aa25.28■■□□□ 1.64
COL16A1-201ENST00000373667 TRIM37O94972 964 aa25.27■■□□□ 1.64
COL16A1-201ENST00000373667 NEFMP07197 916 aa25.27■■□□□ 1.64
COL16A1-201ENST00000373667 C1orf141Q5JVX7 400 aa25.27■■□□□ 1.64
COL16A1-201ENST00000373667 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
COL16A1-201ENST00000373667 PHKG2P15735 406 aa25.26■■□□□ 1.63
COL16A1-201ENST00000373667 UPF1Q92900 1129 aaKnown RBP eCLIP25.26■■□□□ 1.63
COL16A1-201ENST00000373667 PNNQ9H307 717 aaKnown RBP25.26■■□□□ 1.63
COL16A1-201ENST00000373667 SHANK3Q9BYB0 1731 aa25.26■■□□□ 1.63
COL16A1-201ENST00000373667 KAT6BQ8WYB5 2073 aa25.25■■□□□ 1.63
COL16A1-201ENST00000373667 SOCS7O14512 581 aa25.25■■□□□ 1.63
COL16A1-201ENST00000373667 SF3B2Q13435 895 aaKnown RBP25.25■■□□□ 1.63
COL16A1-201ENST00000373667 MTHFSDQ2M296 383 aaKnown RBP25.25■■□□□ 1.63
COL16A1-201ENST00000373667 PHACTR3Q96KR7 559 aa25.25■■□□□ 1.63
COL16A1-201ENST00000373667 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
COL16A1-201ENST00000373667 ADAMTS8Q9UP79 889 aa25.24■■□□□ 1.63
COL16A1-201ENST00000373667 SYTL4Q96C24 671 aaPredicted RBP25.22■■□□□ 1.63
COL16A1-201ENST00000373667 KCNQ2O43526 872 aa25.21■■□□□ 1.63
COL16A1-201ENST00000373667 CCDC125Q86Z20 511 aa25.21■■□□□ 1.63
COL16A1-201ENST00000373667 GAS2L2Q8NHY3 880 aa25.21■■□□□ 1.63
COL16A1-201ENST00000373667 MAPK8IP3Q9UPT6 1336 aa25.2■■□□□ 1.62
COL16A1-201ENST00000373667 HSP90AB1P08238 724 aaKnown RBP25.2■■□□□ 1.62
COL16A1-201ENST00000373667 PRIM1P49642 420 aaKnown RBP25.2■■□□□ 1.62
COL16A1-201ENST00000373667 NKX1-1Q15270 411 aaPredicted RBP25.2■■□□□ 1.62
COL16A1-201ENST00000373667 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
COL16A1-201ENST00000373667 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.62
COL16A1-201ENST00000373667 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
COL16A1-201ENST00000373667 PTF1AQ7RTS3 328 aa25.19■■□□□ 1.62
COL16A1-201ENST00000373667 PLEKHF1Q96S99 279 aa25.19■■□□□ 1.62
COL16A1-201ENST00000373667 BCL9O00512 1426 aa25.19■■□□□ 1.62
COL16A1-201ENST00000373667 APBA3O96018 575 aa25.18■■□□□ 1.62
COL16A1-201ENST00000373667 MIER1Q8N108 512 aa25.18■■□□□ 1.62
COL16A1-201ENST00000373667 BCL11BQ9C0K0 894 aaPredicted RBP25.18■■□□□ 1.62
COL16A1-201ENST00000373667 SBF2Q86WG5 1849 aa25.17■■□□□ 1.62
COL16A1-201ENST00000373667 PNISRQ8TF01 805 aaKnown RBP25.17■■□□□ 1.62
COL16A1-201ENST00000373667 DCAF5Q96JK2 942 aa25.17■■□□□ 1.62
COL16A1-201ENST00000373667 EP400Q96L91 3159 aa25.17■■□□□ 1.62
COL16A1-201ENST00000373667 RUNDC1Q96C34 613 aa25.15■■□□□ 1.62
COL16A1-201ENST00000373667 GNAT3A8MTJ3 354 aa25.14■■□□□ 1.62
COL16A1-201ENST00000373667 FAM9BQ8IZU0 186 aa25.14■■□□□ 1.62
COL16A1-201ENST00000373667 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
COL16A1-201ENST00000373667 BAG6P46379 1132 aa25.13■■□□□ 1.61
COL16A1-201ENST00000373667 LGR6Q9HBX8 967 aa25.13■■□□□ 1.61
COL16A1-201ENST00000373667 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
COL16A1-201ENST00000373667 NFE2L2Q16236 605 aa25.12■■□□□ 1.61
COL16A1-201ENST00000373667 DEFB132Q7Z7B7 95 aa25.12■■□□□ 1.61
COL16A1-201ENST00000373667 MAP3K5Q99683 1374 aa25.11■■□□□ 1.61
COL16A1-201ENST00000373667 RNMTO43148 476 aaKnown RBP25.11■■□□□ 1.61
COL16A1-201ENST00000373667 CABP4P57796 275 aa25.11■■□□□ 1.61
COL16A1-201ENST00000373667 RTF1Q92541 710 aaKnown RBP25.11■■□□□ 1.61
COL16A1-201ENST00000373667 TMOD3Q9NYL9 352 aa25.11■■□□□ 1.61
COL16A1-201ENST00000373667 ERVV-2B6SEH9 535 aa25.1■■□□□ 1.61
COL16A1-201ENST00000373667 NHSQ6T4R5 1651 aa25.1■■□□□ 1.61
COL16A1-201ENST00000373667 EN1Q05925 392 aaPredicted RBP25.09■■□□□ 1.61
COL16A1-201ENST00000373667 NEUROD2Q15784 382 aa25.09■■□□□ 1.61
COL16A1-201ENST00000373667 KDM6AO15550 1401 aaPredicted RBP25.09■■□□□ 1.61
COL16A1-201ENST00000373667 PIGBQ92521 554 aa25.08■■□□□ 1.61
COL16A1-201ENST00000373667 RRP7AQ9Y3A4 280 aaKnown RBP25.08■■□□□ 1.61
COL16A1-201ENST00000373667 TNS1Q9HBL0 1735 aaKnown RBP25.07■■□□□ 1.6
COL16A1-201ENST00000373667 TOGARAM1Q9Y4F4 1720 aa25.07■■□□□ 1.6
COL16A1-201ENST00000373667 RIPK4P57078 832 aa25.07■■□□□ 1.6
COL16A1-201ENST00000373667 NFATC2IPQ8NCF5 419 aa25.07■■□□□ 1.6
COL16A1-201ENST00000373667 IL17REQ8NFR9 667 aa25.07■■□□□ 1.6
COL16A1-201ENST00000373667 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
COL16A1-201ENST00000373667 MCM10Q7L590 875 aa25.06■■□□□ 1.6
COL16A1-201ENST00000373667 ITGB4P16144 1822 aa25.06■■□□□ 1.6
COL16A1-201ENST00000373667 TEFQ10587 303 aa25.05■■□□□ 1.6
COL16A1-201ENST00000373667 DCTN1Q14203 1278 aa25.05■■□□□ 1.6
COL16A1-201ENST00000373667 BTAF1O14981 1849 aa25.05■■□□□ 1.6
COL16A1-201ENST00000373667 SCN11AQ9UI33 1791 aa25.04■■□□□ 1.6
COL16A1-201ENST00000373667 APAF1O14727 1248 aa25.04■■□□□ 1.6
COL16A1-201ENST00000373667 PLSCR1O15162 318 aa25.04■■□□□ 1.6
COL16A1-201ENST00000373667 HTATSF1O43719 755 aaKnown RBP25.04■■□□□ 1.6
COL16A1-201ENST00000373667 EZH2Q15910 746 aaKnown RBP25.04■■□□□ 1.6
COL16A1-201ENST00000373667 SENP3-EIF4A1A0A087X0R7 540 aa25.03■■□□□ 1.6
COL16A1-201ENST00000373667 SLC52A2Q9HAB3 445 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms